Protein–RNA interactions for Protein: Q9QWF0

Chaf1a, Chromatin assembly factor 1 subunit A, mousemouse

Predictions only

Length 911 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chaf1aQ9QWF0 Rasal2-201ENSMUST00000078308 10047 ntAPPRIS P2 TSL 1 (best) BASIC20.42■□□□□ 0.86
Chaf1aQ9QWF0 Man1c1-201ENSMUST00000038628 4285 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Chaf1aQ9QWF0 Rtkn-203ENSMUST00000121093 2597 ntAPPRIS P3 TSL 1 (best) BASIC20.41■□□□□ 0.86
Chaf1aQ9QWF0 Smarcd3-208ENSMUST00000195943 1712 ntTSL 5 BASIC20.41■□□□□ 0.86
Chaf1aQ9QWF0 Smarcd3-201ENSMUST00000030791 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Chaf1aQ9QWF0 Hpn-202ENSMUST00000108102 1830 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Chaf1aQ9QWF0 Smad5-203ENSMUST00000109876 4570 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Chaf1aQ9QWF0 Nmnat3-202ENSMUST00000112937 1898 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Chaf1aQ9QWF0 Gm9954-202ENSMUST00000198686 4725 ntBASIC20.41■□□□□ 0.86
Chaf1aQ9QWF0 Runx1-203ENSMUST00000168195 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
Chaf1aQ9QWF0 Acvr2b-205ENSMUST00000215746 3175 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Chaf1aQ9QWF0 Dtnb-222ENSMUST00000174479 3689 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Chaf1aQ9QWF0 Sart1-201ENSMUST00000044207 5091 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Chaf1aQ9QWF0 Gm27032-201ENSMUST00000183124 1116 ntBASIC20.41■□□□□ 0.86
Chaf1aQ9QWF0 1700017B05Rik-204ENSMUST00000215298 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
Chaf1aQ9QWF0 Mir155hg-202ENSMUST00000185662 1362 ntTSL 5 BASIC20.41■□□□□ 0.86
Chaf1aQ9QWF0 Gm7856-201ENSMUST00000117514 1493 ntBASIC20.41■□□□□ 0.86
Chaf1aQ9QWF0 Tmem39b-201ENSMUST00000102588 1810 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Chaf1aQ9QWF0 Gfra3-201ENSMUST00000025224 1992 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Chaf1aQ9QWF0 Dixdc1-207ENSMUST00000121634 2420 ntTSL 5 BASIC20.41■□□□□ 0.86
Chaf1aQ9QWF0 Lrch2-201ENSMUST00000112819 4892 ntAPPRIS P1 TSL 5 BASIC20.41■□□□□ 0.86
Chaf1aQ9QWF0 Nectin3-202ENSMUST00000023335 9116 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
Chaf1aQ9QWF0 Negr1-202ENSMUST00000074015 4983 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Chaf1aQ9QWF0 Spire1-203ENSMUST00000115050 5405 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
Chaf1aQ9QWF0 Gm10167-201ENSMUST00000150411 1479 ntBASIC20.4■□□□□ 0.86
Chaf1aQ9QWF0 Arhgap8-207ENSMUST00000172307 1544 ntAPPRIS P1 TSL 5 BASIC20.4■□□□□ 0.86
Chaf1aQ9QWF0 C230062I16Rik-202ENSMUST00000207746 1022 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
Chaf1aQ9QWF0 Jmjd7-201ENSMUST00000044675 1373 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Chaf1aQ9QWF0 H2-Ke6-201ENSMUST00000045467 965 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Chaf1aQ9QWF0 Ninj1-201ENSMUST00000049022 1187 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Chaf1aQ9QWF0 Akr7a5-201ENSMUST00000073787 1288 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Chaf1aQ9QWF0 Chtop-203ENSMUST00000076639 1842 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
Chaf1aQ9QWF0 Eomes-202ENSMUST00000111763 2869 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
Chaf1aQ9QWF0 Fbxw5-201ENSMUST00000015239 2388 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
Chaf1aQ9QWF0 AC154231.1-201ENSMUST00000220564 2175 ntBASIC20.39■□□□□ 0.86
Chaf1aQ9QWF0 Snap91-201ENSMUST00000036347 4237 ntAPPRIS ALT2 TSL 5 BASIC20.39■□□□□ 0.86
Chaf1aQ9QWF0 St8sia5-202ENSMUST00000079618 1989 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
Chaf1aQ9QWF0 Mfsd10-201ENSMUST00000001109 1907 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
Chaf1aQ9QWF0 Foxp1-225ENSMUST00000177229 1848 ntAPPRIS ALT2 TSL 5 BASIC20.39■□□□□ 0.86
Chaf1aQ9QWF0 Tmem121-201ENSMUST00000058491 1574 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Chaf1aQ9QWF0 Insm1-201ENSMUST00000089257 3100 ntAPPRIS P1 BASIC20.39■□□□□ 0.85
Chaf1aQ9QWF0 Rgs19-202ENSMUST00000108769 1460 ntTSL 2 BASIC20.39■□□□□ 0.85
Chaf1aQ9QWF0 2200002D01Rik-201ENSMUST00000032808 1466 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Chaf1aQ9QWF0 Ddx39b-203ENSMUST00000173731 2848 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Chaf1aQ9QWF0 Trim37-201ENSMUST00000041282 5632 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Chaf1aQ9QWF0 Plxnd1-201ENSMUST00000015511 6907 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Chaf1aQ9QWF0 Ppp1r12b-203ENSMUST00000112163 828 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
Chaf1aQ9QWF0 Gm26971-201ENSMUST00000182423 1072 ntBASIC20.39■□□□□ 0.85
Chaf1aQ9QWF0 Slc37a3-211ENSMUST00000202749 434 ntTSL 5 BASIC20.39■□□□□ 0.85
Chaf1aQ9QWF0 Gm2011-201ENSMUST00000203124 1263 ntBASIC20.39■□□□□ 0.85
Chaf1aQ9QWF0 Cox7c-202ENSMUST00000078764 433 ntTSL 2 BASIC20.39■□□□□ 0.85
Chaf1aQ9QWF0 Tbc1d2b-202ENSMUST00000128874 3473 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
Chaf1aQ9QWF0 Actl6b-205ENSMUST00000139395 1592 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Chaf1aQ9QWF0 Gna11-201ENSMUST00000043604 3414 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Chaf1aQ9QWF0 Klhl25-201ENSMUST00000092073 3385 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Chaf1aQ9QWF0 Marc2-201ENSMUST00000068725 1917 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Chaf1aQ9QWF0 Tcp1-201ENSMUST00000089024 1902 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Chaf1aQ9QWF0 Sumo3-209ENSMUST00000174113 512 ntAPPRIS P1 TSL 2 BASIC20.38■□□□□ 0.85
Chaf1aQ9QWF0 CT010467.1-202ENSMUST00000205406 714 ntBASIC20.38■□□□□ 0.85
Chaf1aQ9QWF0 Hes3-202ENSMUST00000218045 962 ntAPPRIS ALT2 TSL 5 BASIC20.38■□□□□ 0.85
Chaf1aQ9QWF0 Tsks-202ENSMUST00000120929 1843 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
Chaf1aQ9QWF0 Ppm1m-203ENSMUST00000140761 1846 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Chaf1aQ9QWF0 Gm43213-201ENSMUST00000151866 1790 ntBASIC20.38■□□□□ 0.85
Chaf1aQ9QWF0 Ctbp2-201ENSMUST00000033269 2321 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Chaf1aQ9QWF0 Lhx2-203ENSMUST00000143783 1696 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Chaf1aQ9QWF0 Angptl6-201ENSMUST00000043726 1582 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Chaf1aQ9QWF0 Agbl5-215ENSMUST00000202060 3121 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
Chaf1aQ9QWF0 Glra1-202ENSMUST00000102716 2390 ntAPPRIS P3 TSL 1 (best) BASIC20.37■□□□□ 0.85
Chaf1aQ9QWF0 Gm26507-201ENSMUST00000181838 1410 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Chaf1aQ9QWF0 Thumpd2-201ENSMUST00000025093 1856 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Chaf1aQ9QWF0 Ddx41-201ENSMUST00000021956 2205 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Chaf1aQ9QWF0 Lin7a-203ENSMUST00000218031 1769 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Chaf1aQ9QWF0 Exog-202ENSMUST00000164213 2627 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Chaf1aQ9QWF0 Tmem8-201ENSMUST00000025010 3464 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Chaf1aQ9QWF0 Nfu1-202ENSMUST00000117583 950 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
Chaf1aQ9QWF0 Rab6b-202ENSMUST00000189134 716 ntTSL 3 BASIC20.37■□□□□ 0.85
Chaf1aQ9QWF0 Mfap4-201ENSMUST00000040522 939 ntAPPRIS ALT2 TSL 2 BASIC20.37■□□□□ 0.85
Chaf1aQ9QWF0 Gm10306-201ENSMUST00000094969 533 ntAPPRIS P1 BASIC20.37■□□□□ 0.85
Chaf1aQ9QWF0 March8-202ENSMUST00000101032 4611 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Chaf1aQ9QWF0 Krcc1-203ENSMUST00000204436 1687 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Chaf1aQ9QWF0 Fam149b-204ENSMUST00000090503 2053 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Chaf1aQ9QWF0 Etv5-201ENSMUST00000079601 3975 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Chaf1aQ9QWF0 Scn1b-203ENSMUST00000211945 1501 ntAPPRIS P1 TSL 5 BASIC20.37■□□□□ 0.85
Chaf1aQ9QWF0 Mlf2-201ENSMUST00000032214 1451 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Chaf1aQ9QWF0 Smad7-201ENSMUST00000026999 4278 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Chaf1aQ9QWF0 Tuba3b-201ENSMUST00000087445 1775 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Chaf1aQ9QWF0 Atxn7-201ENSMUST00000022257 6853 ntAPPRIS P2 TSL 1 (best) BASIC20.36■□□□□ 0.85
Chaf1aQ9QWF0 Spc24-205ENSMUST00000217382 1696 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Chaf1aQ9QWF0 Csnk1a1-206ENSMUST00000165721 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Chaf1aQ9QWF0 Fst-202ENSMUST00000223640 2612 ntBASIC20.36■□□□□ 0.85
Chaf1aQ9QWF0 Gm3164-201ENSMUST00000168866 1945 ntAPPRIS P1 TSL 5 BASIC20.36■□□□□ 0.85
Chaf1aQ9QWF0 Gm11713-201ENSMUST00000139941 523 ntTSL 3 BASIC20.36■□□□□ 0.85
Chaf1aQ9QWF0 Gm11650-201ENSMUST00000141271 1145 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Chaf1aQ9QWF0 Gnai2-203ENSMUST00000192837 421 ntTSL 5 BASIC20.36■□□□□ 0.85
Chaf1aQ9QWF0 Zcchc13-201ENSMUST00000033692 1085 ntAPPRIS P1 BASIC20.36■□□□□ 0.85
Chaf1aQ9QWF0 Gm9988-201ENSMUST00000069786 435 ntBASIC20.36■□□□□ 0.85
Chaf1aQ9QWF0 Tspan17-202ENSMUST00000099503 822 ntAPPRIS ALT1 TSL 5 BASIC20.36■□□□□ 0.85
Chaf1aQ9QWF0 Hpca-201ENSMUST00000030572 1525 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Chaf1aQ9QWF0 Mpp3-203ENSMUST00000107167 2066 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Chaf1aQ9QWF0 Reep4-203ENSMUST00000226563 1444 ntBASIC20.36■□□□□ 0.85
Retrieved 100 of 76,532 protein–RNA pairs in 26.2 ms