Protein–RNA interactions for Protein: Q9JL61

Rfx5, DNA-binding protein Rfx5, mousemouse

Predictions only

Length 658 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx5Q9JL61 Rab5c-202ENSMUST00000107364 1915 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Rfx5Q9JL61 Eif4g3-201ENSMUST00000058133 2663 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Rfx5Q9JL61 Gatad2a-202ENSMUST00000116463 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Rfx5Q9JL61 Rapgef1-201ENSMUST00000091146 6212 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Rfx5Q9JL61 Dus1l-202ENSMUST00000106133 1762 ntAPPRIS ALT2 TSL 5 BASIC19.34■□□□□ 0.69
Rfx5Q9JL61 Trnt1-202ENSMUST00000113247 1934 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Rfx5Q9JL61 Spg7-209ENSMUST00000149248 2896 ntAPPRIS P2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Rfx5Q9JL61 Arl6ip4-202ENSMUST00000122394 982 ntAPPRIS ALT2 TSL 5 BASIC19.34■□□□□ 0.69
Rfx5Q9JL61 Gm6270-201ENSMUST00000132731 559 ntTSL 5 BASIC19.34■□□□□ 0.69
Rfx5Q9JL61 Sap30-201ENSMUST00000034022 1178 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Rfx5Q9JL61 Mbip-201ENSMUST00000021416 1512 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Rfx5Q9JL61 Hpn-202ENSMUST00000108102 1830 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Rfx5Q9JL61 Cenpa-205ENSMUST00000144742 1466 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Rfx5Q9JL61 Il4i1-201ENSMUST00000033015 2048 ntAPPRIS P3 TSL 1 (best) BASIC19.34■□□□□ 0.69
Rfx5Q9JL61 Mrps23-203ENSMUST00000118784 1404 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Rfx5Q9JL61 Lsp1-204ENSMUST00000105967 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.69
Rfx5Q9JL61 Nlrp5-ps-201ENSMUST00000044683 1913 ntTSL 2 BASIC19.33■□□□□ 0.69
Rfx5Q9JL61 Mark2-203ENSMUST00000051711 2867 ntAPPRIS P4 TSL 1 (best) BASIC19.33■□□□□ 0.69
Rfx5Q9JL61 Phf14-202ENSMUST00000115510 3353 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
Rfx5Q9JL61 Bhlhe22-201ENSMUST00000026120 3344 ntAPPRIS P1 BASIC19.33■□□□□ 0.69
Rfx5Q9JL61 Acot8-202ENSMUST00000103094 1152 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Rfx5Q9JL61 Gm11249-201ENSMUST00000117071 859 ntBASIC19.33■□□□□ 0.68
Rfx5Q9JL61 Gm15847-201ENSMUST00000121417 1065 ntBASIC19.33■□□□□ 0.68
Rfx5Q9JL61 Acot8-201ENSMUST00000017451 1055 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Rfx5Q9JL61 1700101I19Rik-202ENSMUST00000186712 510 ntBASIC19.33■□□□□ 0.68
Rfx5Q9JL61 Anapc13-204ENSMUST00000190279 589 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Rfx5Q9JL61 Crybb1-201ENSMUST00000031286 882 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Rfx5Q9JL61 Hira-201ENSMUST00000004222 4218 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Rfx5Q9JL61 Rassf1-201ENSMUST00000010211 1727 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Rfx5Q9JL61 Rae1-201ENSMUST00000029013 1742 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Rfx5Q9JL61 Kif27-203ENSMUST00000225388 5121 ntAPPRIS P1 BASIC19.33■□□□□ 0.68
Rfx5Q9JL61 Lpcat2-205ENSMUST00000210099 2179 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Rfx5Q9JL61 Zc3h15-201ENSMUST00000081591 2111 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Rfx5Q9JL61 Tuba3b-201ENSMUST00000087445 1775 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Rfx5Q9JL61 Podxl2-202ENSMUST00000061262 2195 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
Rfx5Q9JL61 Gm11927-201ENSMUST00000118472 759 ntBASIC19.32■□□□□ 0.68
Rfx5Q9JL61 Sp3os-201ENSMUST00000123087 583 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Rfx5Q9JL61 Zfp783-201ENSMUST00000095946 670 ntBASIC19.32■□□□□ 0.68
Rfx5Q9JL61 Anks1b-217ENSMUST00000182550 1868 ntTSL 5 BASIC19.32■□□□□ 0.68
Rfx5Q9JL61 Gm44544-201ENSMUST00000207052 1844 ntBASIC19.32■□□□□ 0.68
Rfx5Q9JL61 Tmem245-202ENSMUST00000107609 2643 ntAPPRIS P2 TSL 5 BASIC19.32■□□□□ 0.68
Rfx5Q9JL61 Cerk-201ENSMUST00000044332 4518 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Rfx5Q9JL61 Cdca4-201ENSMUST00000062092 2425 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Rfx5Q9JL61 Trmt61a-201ENSMUST00000084947 2433 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Rfx5Q9JL61 Clint1-201ENSMUST00000109260 3311 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
Rfx5Q9JL61 Pcbp1-201ENSMUST00000053015 1830 ntAPPRIS P1 BASIC19.31■□□□□ 0.68
Rfx5Q9JL61 Selenos-201ENSMUST00000101801 1191 ntAPPRIS P2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Rfx5Q9JL61 Rpl38-202ENSMUST00000082092 345 ntAPPRIS P1 TSL 2 BASIC19.31■□□□□ 0.68
Rfx5Q9JL61 Mmp24-201ENSMUST00000029141 4306 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Rfx5Q9JL61 Pcmtd1-201ENSMUST00000061280 5232 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Rfx5Q9JL61 Chmp6-201ENSMUST00000026434 1557 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Rfx5Q9JL61 Isca1-201ENSMUST00000057115 1942 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Rfx5Q9JL61 Tmem185a-201ENSMUST00000101506 2429 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Rfx5Q9JL61 Anapc5-203ENSMUST00000196640 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Rfx5Q9JL61 A130051J06Rik-201ENSMUST00000180649 2618 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Rfx5Q9JL61 2310068J16Rik-201ENSMUST00000188271 1124 ntBASIC19.3■□□□□ 0.68
Rfx5Q9JL61 Tagln-201ENSMUST00000034590 1595 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Rfx5Q9JL61 Tpra1-223ENSMUST00000204765 1738 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Rfx5Q9JL61 Smpdl3a-201ENSMUST00000020022 1961 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Rfx5Q9JL61 Tfap4-201ENSMUST00000005862 2113 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Rfx5Q9JL61 Ssx2ip-201ENSMUST00000039021 3410 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Rfx5Q9JL61 Cenpb-201ENSMUST00000089510 4886 ntAPPRIS P1 BASIC19.29■□□□□ 0.68
Rfx5Q9JL61 Flg-201ENSMUST00000050758 1488 ntBASIC19.29■□□□□ 0.68
Rfx5Q9JL61 Lrfn4-202ENSMUST00000113822 2918 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Rfx5Q9JL61 Tmem44-204ENSMUST00000140402 2405 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Rfx5Q9JL61 Gm38285-201ENSMUST00000192928 922 ntBASIC19.29■□□□□ 0.68
Rfx5Q9JL61 Cck-204ENSMUST00000216138 799 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Rfx5Q9JL61 Gm35558-201ENSMUST00000222675 2219 ntBASIC19.29■□□□□ 0.68
Rfx5Q9JL61 Pon1-201ENSMUST00000002663 1513 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Rfx5Q9JL61 Gspt1-201ENSMUST00000080030 2898 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
Rfx5Q9JL61 Map6-202ENSMUST00000107100 2335 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Rfx5Q9JL61 Egln2-202ENSMUST00000108382 1756 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
Rfx5Q9JL61 Fam98b-201ENSMUST00000028825 1861 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Rfx5Q9JL61 Espn-206ENSMUST00000103196 1323 ntTSL 5 BASIC19.28■□□□□ 0.68
Rfx5Q9JL61 Chst7-201ENSMUST00000044138 2206 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Rfx5Q9JL61 Gpr137-202ENSMUST00000099774 1434 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Rfx5Q9JL61 Spcs1-201ENSMUST00000186131 1005 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Rfx5Q9JL61 Sh2b2-204ENSMUST00000196447 1783 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Rfx5Q9JL61 Anks1b-208ENSMUST00000182053 1649 ntTSL 5 BASIC19.28■□□□□ 0.68
Rfx5Q9JL61 Gm19531-201ENSMUST00000216737 1377 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Rfx5Q9JL61 Sncb-201ENSMUST00000036825 1351 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Rfx5Q9JL61 Gm11549-201ENSMUST00000124606 2829 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Rfx5Q9JL61 Mrpl15-205ENSMUST00000146665 1569 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Rfx5Q9JL61 Tgds-204ENSMUST00000228543 1594 ntBASIC19.27■□□□□ 0.68
Rfx5Q9JL61 H2-DMa-201ENSMUST00000042121 1555 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Rfx5Q9JL61 Atxn7l2-202ENSMUST00000117409 2321 ntAPPRIS ALT2 TSL 5 BASIC19.27■□□□□ 0.68
Rfx5Q9JL61 Hist1h4c-201ENSMUST00000102967 820 ntAPPRIS P1 BASIC19.27■□□□□ 0.68
Rfx5Q9JL61 Josd2-204ENSMUST00000118628 864 ntAPPRIS P1 TSL 2 BASIC19.27■□□□□ 0.68
Rfx5Q9JL61 Scamp4-202ENSMUST00000180350 1271 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Rfx5Q9JL61 Trmt13-210ENSMUST00000198454 880 ntBASIC19.27■□□□□ 0.68
Rfx5Q9JL61 Gm16475-201ENSMUST00000207306 512 ntTSL 2 BASIC19.27■□□□□ 0.68
Rfx5Q9JL61 AC135637.1-201ENSMUST00000227750 365 ntBASIC19.27■□□□□ 0.68
Rfx5Q9JL61 Josd2-201ENSMUST00000035844 930 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Rfx5Q9JL61 Fam50b-201ENSMUST00000039605 1229 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Rfx5Q9JL61 Mtag2-201ENSMUST00000058665 714 ntBASIC19.27■□□□□ 0.68
Rfx5Q9JL61 Gm15558-201ENSMUST00000126849 2018 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
Rfx5Q9JL61 Kctd15-201ENSMUST00000032709 2480 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Rfx5Q9JL61 Fzd2-201ENSMUST00000057893 3663 ntAPPRIS P1 BASIC19.27■□□□□ 0.67
Rfx5Q9JL61 St8sia5-202ENSMUST00000079618 1989 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Rfx5Q9JL61 Ngb-201ENSMUST00000021420 1616 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
Retrieved 100 of 76,532 protein–RNA pairs in 18.9 ms