Protein–RNA interactions for Protein: Q9JJ89

Ccdc86, Coiled-coil domain-containing protein 86, mousemouse

Predictions only

Length 426 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc86Q9JJ89 Snhg6-203ENSMUST00000182580 473 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Ccdc86Q9JJ89 Nat8-201ENSMUST00000032073 1123 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Ccdc86Q9JJ89 BC107364-201ENSMUST00000093126 1159 ntAPPRIS P4 TSL 1 (best) BASIC18.66■□□□□ 0.58
Ccdc86Q9JJ89 BC107364-202ENSMUST00000098841 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Ccdc86Q9JJ89 Btbd2-201ENSMUST00000003434 3026 ntAPPRIS P2 TSL 5 BASIC18.66■□□□□ 0.58
Ccdc86Q9JJ89 Laptm4b-201ENSMUST00000022867 1902 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Ccdc86Q9JJ89 Nsmf-204ENSMUST00000102931 2830 ntTSL 5 BASIC18.66■□□□□ 0.58
Ccdc86Q9JJ89 Fbxo24-202ENSMUST00000111002 2306 ntTSL 5 BASIC18.66■□□□□ 0.58
Ccdc86Q9JJ89 Wnt10b-202ENSMUST00000166022 1594 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Ccdc86Q9JJ89 Gm11627-202ENSMUST00000107081 818 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
Ccdc86Q9JJ89 Boll-203ENSMUST00000159398 658 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Ccdc86Q9JJ89 1700003N22Rik-201ENSMUST00000194834 808 ntBASIC18.65■□□□□ 0.58
Ccdc86Q9JJ89 5033430I15Rik-201ENSMUST00000038032 729 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Ccdc86Q9JJ89 Oxld1-201ENSMUST00000044007 813 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Ccdc86Q9JJ89 Stim2-201ENSMUST00000117661 4934 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Ccdc86Q9JJ89 Podxl2-202ENSMUST00000061262 2195 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
Ccdc86Q9JJ89 Rnf112-201ENSMUST00000054927 3086 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Ccdc86Q9JJ89 Gpr137b-ps-203ENSMUST00000220758 1942 ntTSL 1 (best) BASIC18.64■□□□□ 0.58
Ccdc86Q9JJ89 Arhgap8-201ENSMUST00000006029 1527 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.58
Ccdc86Q9JJ89 Slc29a1-201ENSMUST00000051574 1996 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.58
Ccdc86Q9JJ89 Ncmap-205ENSMUST00000105860 2000 ntTSL 1 (best) BASIC18.64■□□□□ 0.58
Ccdc86Q9JJ89 Nrxn2-201ENSMUST00000077182 6059 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.58
Ccdc86Q9JJ89 Cdkl3-203ENSMUST00000109076 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Ccdc86Q9JJ89 Rtkn-203ENSMUST00000121093 2597 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
Ccdc86Q9JJ89 Map3k21-201ENSMUST00000034316 5693 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Ccdc86Q9JJ89 Tnk1-202ENSMUST00000108626 1798 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Ccdc86Q9JJ89 Elof1-204ENSMUST00000214394 567 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.57
Ccdc86Q9JJ89 Smn1-201ENSMUST00000022147 1222 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Ccdc86Q9JJ89 Ppt2-204ENSMUST00000168391 1342 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
Ccdc86Q9JJ89 Grk6-206ENSMUST00000224995 2971 ntBASIC18.64■□□□□ 0.57
Ccdc86Q9JJ89 Slc35a3-201ENSMUST00000029569 5725 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Ccdc86Q9JJ89 Sh3bp1-202ENSMUST00000061239 1917 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Ccdc86Q9JJ89 Lhfp-201ENSMUST00000059562 2108 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Ccdc86Q9JJ89 Rcor1-201ENSMUST00000084968 5684 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Ccdc86Q9JJ89 Timm29-201ENSMUST00000062125 3170 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Ccdc86Q9JJ89 Hcn2-202ENSMUST00000099513 3195 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Ccdc86Q9JJ89 Tmem39b-201ENSMUST00000102588 1810 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Ccdc86Q9JJ89 Srsf11-202ENSMUST00000072875 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Ccdc86Q9JJ89 Smim1-209ENSMUST00000145527 562 ntAPPRIS P1 TSL 2 BASIC18.63■□□□□ 0.57
Ccdc86Q9JJ89 AC175538.2-202ENSMUST00000224997 1057 ntAPPRIS P1 BASIC18.63■□□□□ 0.57
Ccdc86Q9JJ89 Cldn3-201ENSMUST00000094245 1259 ntAPPRIS P1 BASIC18.63■□□□□ 0.57
Ccdc86Q9JJ89 Slc12a2-201ENSMUST00000115366 6520 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Ccdc86Q9JJ89 Trpc4ap-202ENSMUST00000103140 3091 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
Ccdc86Q9JJ89 Frmd3-202ENSMUST00000098006 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Ccdc86Q9JJ89 Gsto2-201ENSMUST00000056159 1351 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Ccdc86Q9JJ89 Gm43859-201ENSMUST00000200075 1412 ntBASIC18.63■□□□□ 0.57
Ccdc86Q9JJ89 Ispd-207ENSMUST00000223205 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Ccdc86Q9JJ89 Grk2-202ENSMUST00000088737 3376 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Ccdc86Q9JJ89 Pomgnt2-207ENSMUST00000217610 2413 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Ccdc86Q9JJ89 Cdca4-201ENSMUST00000062092 2425 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Ccdc86Q9JJ89 Agbl5-209ENSMUST00000201225 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Ccdc86Q9JJ89 AU019823-202ENSMUST00000145139 2805 ntTSL 2 BASIC18.63■□□□□ 0.57
Ccdc86Q9JJ89 Tmod1-201ENSMUST00000107773 3158 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
Ccdc86Q9JJ89 Magi2-202ENSMUST00000101558 6530 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Ccdc86Q9JJ89 Gm29458-201ENSMUST00000187093 354 ntTSL 3 BASIC18.62■□□□□ 0.57
Ccdc86Q9JJ89 Gm26524-201ENSMUST00000192339 390 ntBASIC18.62■□□□□ 0.57
Ccdc86Q9JJ89 Cmtm7-204ENSMUST00000216760 665 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Ccdc86Q9JJ89 Zfp580-201ENSMUST00000069324 1096 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Ccdc86Q9JJ89 Hspe1-201ENSMUST00000075242 774 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Ccdc86Q9JJ89 Npdc1-201ENSMUST00000055921 1412 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
Ccdc86Q9JJ89 Arrb2-202ENSMUST00000084954 1732 ntTSL 5 BASIC18.62■□□□□ 0.57
Ccdc86Q9JJ89 Gfer-201ENSMUST00000046839 1775 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Ccdc86Q9JJ89 Osbpl1a-203ENSMUST00000118313 2893 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Ccdc86Q9JJ89 Fam222a-201ENSMUST00000043650 2930 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Ccdc86Q9JJ89 Ints6-201ENSMUST00000053959 4993 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Ccdc86Q9JJ89 A130051J06Rik-201ENSMUST00000180649 2618 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Ccdc86Q9JJ89 Map1lc3b-204ENSMUST00000181826 2633 ntBASIC18.61■□□□□ 0.57
Ccdc86Q9JJ89 Ccdc91-201ENSMUST00000032441 2459 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Ccdc86Q9JJ89 Abcd4-210ENSMUST00000223107 2410 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Ccdc86Q9JJ89 Larp1b-202ENSMUST00000048490 2354 ntAPPRIS P2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Ccdc86Q9JJ89 Runx2-204ENSMUST00000159943 2316 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
Ccdc86Q9JJ89 Gm5464-201ENSMUST00000100453 2156 ntAPPRIS P1 BASIC18.61■□□□□ 0.57
Ccdc86Q9JJ89 Trim63-202ENSMUST00000105875 1886 ntAPPRIS P2 TSL 5 BASIC18.61■□□□□ 0.57
Ccdc86Q9JJ89 Klk9-201ENSMUST00000005891 1476 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Ccdc86Q9JJ89 Anapc16-201ENSMUST00000020307 1379 ntTSL 2 BASIC18.61■□□□□ 0.57
Ccdc86Q9JJ89 B230208B08Rik-201ENSMUST00000173049 404 ntTSL 3 BASIC18.61■□□□□ 0.57
Ccdc86Q9JJ89 Ccdc85b-201ENSMUST00000179549 609 ntAPPRIS P1 BASIC18.61■□□□□ 0.57
Ccdc86Q9JJ89 Gm40460-201ENSMUST00000211591 735 ntAPPRIS P1 BASIC18.61■□□□□ 0.57
Ccdc86Q9JJ89 Gm7075-201ENSMUST00000054760 425 ntAPPRIS P1 BASIC18.61■□□□□ 0.57
Ccdc86Q9JJ89 Gm10602-201ENSMUST00000098239 609 ntBASIC18.61■□□□□ 0.57
Ccdc86Q9JJ89 Txndc5-201ENSMUST00000035988 2843 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
Ccdc86Q9JJ89 Brms1l-201ENSMUST00000059250 2609 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Ccdc86Q9JJ89 Atxn7l2-202ENSMUST00000117409 2321 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
Ccdc86Q9JJ89 Tada2b-201ENSMUST00000031097 3791 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
Ccdc86Q9JJ89 Vsig10-201ENSMUST00000086464 2052 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
Ccdc86Q9JJ89 Rnf26-201ENSMUST00000056328 2724 ntAPPRIS P2 BASIC18.6■□□□□ 0.57
Ccdc86Q9JJ89 Snx16-202ENSMUST00000099223 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Ccdc86Q9JJ89 AL591207.1-203ENSMUST00000222401 1380 ntTSL 5 BASIC18.6■□□□□ 0.57
Ccdc86Q9JJ89 Smim27-201ENSMUST00000129758 1044 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Ccdc86Q9JJ89 Hist2h2aa2-201ENSMUST00000074976 528 ntAPPRIS P1 BASIC18.6■□□□□ 0.57
Ccdc86Q9JJ89 Hist2h2aa1-201ENSMUST00000078756 586 ntAPPRIS P1 BASIC18.6■□□□□ 0.57
Ccdc86Q9JJ89 Prdm8-201ENSMUST00000112959 4553 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Ccdc86Q9JJ89 Nadk2-201ENSMUST00000067760 3731 ntAPPRIS P5 TSL 5 BASIC18.6■□□□□ 0.57
Ccdc86Q9JJ89 Shisa7-203ENSMUST00000119433 3481 ntAPPRIS P2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Ccdc86Q9JJ89 Nmnat3-202ENSMUST00000112937 1898 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Ccdc86Q9JJ89 Adamts18-201ENSMUST00000093113 5642 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Ccdc86Q9JJ89 Fndc4-202ENSMUST00000172435 2333 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Ccdc86Q9JJ89 Ttc32-202ENSMUST00000219470 1645 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Ccdc86Q9JJ89 Cyp4f16-201ENSMUST00000003416 2227 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Ccdc86Q9JJ89 Xrcc6-202ENSMUST00000100399 3296 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Retrieved 100 of 76,532 protein–RNA pairs in 17.7 ms