Protein–RNA interactions for Protein: Q9EQR4

Clca3a2, Chloride channel accessory 3A2, mousemouse

Predictions only

Length 902 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clca3a2Q9EQR4 Hist2h2aa2-201ENSMUST00000074976 528 ntAPPRIS P1 BASIC17.46■□□□□ 0.39
Clca3a2Q9EQR4 Hist2h2aa1-201ENSMUST00000078756 586 ntAPPRIS P1 BASIC17.46■□□□□ 0.39
Clca3a2Q9EQR4 2810474O19Rik-201ENSMUST00000046689 6066 ntAPPRIS P2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Clca3a2Q9EQR4 Eno1-202ENSMUST00000080926 2027 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Clca3a2Q9EQR4 Hmgxb3-201ENSMUST00000091884 5101 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Clca3a2Q9EQR4 Kctd15-201ENSMUST00000032709 2480 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Clca3a2Q9EQR4 Egln1-201ENSMUST00000034469 3594 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Clca3a2Q9EQR4 Gm26674-201ENSMUST00000180770 1446 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Clca3a2Q9EQR4 Npdc1-201ENSMUST00000055921 1412 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.39
Clca3a2Q9EQR4 Ppt2-204ENSMUST00000168391 1342 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.38
Clca3a2Q9EQR4 Adgra2-202ENSMUST00000178514 5129 ntTSL 5 BASIC17.45■□□□□ 0.38
Clca3a2Q9EQR4 Laptm4b-201ENSMUST00000022867 1902 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Clca3a2Q9EQR4 Maff-201ENSMUST00000096350 1933 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Clca3a2Q9EQR4 Dscc1-202ENSMUST00000110231 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Clca3a2Q9EQR4 Fgf11-201ENSMUST00000011285 2534 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Clca3a2Q9EQR4 Fmnl2-203ENSMUST00000090952 5414 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
Clca3a2Q9EQR4 Trmt61a-201ENSMUST00000084947 2433 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Clca3a2Q9EQR4 Mfsd14a-201ENSMUST00000029570 2782 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Clca3a2Q9EQR4 Tspan2os-201ENSMUST00000146624 590 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Clca3a2Q9EQR4 Gm29458-201ENSMUST00000187093 354 ntTSL 3 BASIC17.45■□□□□ 0.38
Clca3a2Q9EQR4 Slc35b2-207ENSMUST00000226086 850 ntBASIC17.45■□□□□ 0.38
Clca3a2Q9EQR4 Cnpy1-201ENSMUST00000117098 2661 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Clca3a2Q9EQR4 Clint1-201ENSMUST00000109260 3311 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
Clca3a2Q9EQR4 Il4i1-201ENSMUST00000033015 2048 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
Clca3a2Q9EQR4 Tmem245-202ENSMUST00000107609 2643 ntAPPRIS P2 TSL 5 BASIC17.45■□□□□ 0.38
Clca3a2Q9EQR4 Gspt1-201ENSMUST00000080030 2898 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
Clca3a2Q9EQR4 Galnt3-201ENSMUST00000028378 3885 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Clca3a2Q9EQR4 Sox12-201ENSMUST00000063332 4169 ntAPPRIS P1 TSL 2 BASIC17.44■□□□□ 0.38
Clca3a2Q9EQR4 Dolk-201ENSMUST00000100219 2104 ntAPPRIS P1 BASIC17.44■□□□□ 0.38
Clca3a2Q9EQR4 Enah-203ENSMUST00000111025 3385 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
Clca3a2Q9EQR4 Porcn-202ENSMUST00000082320 1883 ntAPPRIS ALT1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Clca3a2Q9EQR4 Zfp382-201ENSMUST00000098596 2117 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Clca3a2Q9EQR4 4732440D04Rik-203ENSMUST00000191825 5428 ntBASIC17.44■□□□□ 0.38
Clca3a2Q9EQR4 Ube2b-202ENSMUST00000109086 585 ntAPPRIS P1 TSL 2 BASIC17.44■□□□□ 0.38
Clca3a2Q9EQR4 Smim1-209ENSMUST00000145527 562 ntAPPRIS P1 TSL 2 BASIC17.44■□□□□ 0.38
Clca3a2Q9EQR4 Gm10153-202ENSMUST00000210290 963 ntAPPRIS P1 BASIC17.44■□□□□ 0.38
Clca3a2Q9EQR4 Rnf208-201ENSMUST00000060818 1137 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Clca3a2Q9EQR4 Dennd2a-201ENSMUST00000036877 4468 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Clca3a2Q9EQR4 Golga7-202ENSMUST00000121783 1945 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Clca3a2Q9EQR4 Gpr137b-ps-203ENSMUST00000220758 1942 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Clca3a2Q9EQR4 Cdc14b-201ENSMUST00000039318 5859 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
Clca3a2Q9EQR4 Tfdp2-209ENSMUST00000188750 1713 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
Clca3a2Q9EQR4 Dennd6a-201ENSMUST00000037585 6638 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Clca3a2Q9EQR4 Gfer-201ENSMUST00000046839 1775 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Clca3a2Q9EQR4 Bmp8a-202ENSMUST00000102641 1917 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
Clca3a2Q9EQR4 Fstl3-201ENSMUST00000020575 1955 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Clca3a2Q9EQR4 Cfl1-201ENSMUST00000116560 1148 ntTSL 5 BASIC17.43■□□□□ 0.38
Clca3a2Q9EQR4 Coro1a-209ENSMUST00000173108 1170 ntTSL 5 BASIC17.43■□□□□ 0.38
Clca3a2Q9EQR4 1700003N22Rik-201ENSMUST00000194834 808 ntBASIC17.43■□□□□ 0.38
Clca3a2Q9EQR4 Hspe1-201ENSMUST00000075242 774 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Clca3a2Q9EQR4 Efna4-201ENSMUST00000029674 1599 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Clca3a2Q9EQR4 Trim63-202ENSMUST00000105875 1886 ntAPPRIS P2 TSL 5 BASIC17.43■□□□□ 0.38
Clca3a2Q9EQR4 2700046G09Rik-201ENSMUST00000181612 1641 ntTSL 2 BASIC17.43■□□□□ 0.38
Clca3a2Q9EQR4 Tmem145-202ENSMUST00000119703 1781 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
Clca3a2Q9EQR4 Dmtn-210ENSMUST00000228824 2377 ntBASIC17.43■□□□□ 0.38
Clca3a2Q9EQR4 Ttyh3-201ENSMUST00000042661 4658 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Clca3a2Q9EQR4 Flot1-201ENSMUST00000001569 1825 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Clca3a2Q9EQR4 Gpn2-201ENSMUST00000030661 1367 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Clca3a2Q9EQR4 Cacng4-201ENSMUST00000021066 3500 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Clca3a2Q9EQR4 Shc2-201ENSMUST00000020564 3243 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
Clca3a2Q9EQR4 AC123834.2-201ENSMUST00000224038 2340 ntBASIC17.42■□□□□ 0.38
Clca3a2Q9EQR4 Tial1-201ENSMUST00000033135 1580 ntAPPRIS ALT1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Clca3a2Q9EQR4 Zfp746-203ENSMUST00000203609 3648 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
Clca3a2Q9EQR4 Gm35558-201ENSMUST00000222675 2219 ntBASIC17.42■□□□□ 0.38
Clca3a2Q9EQR4 Ccdc85b-201ENSMUST00000179549 609 ntAPPRIS P1 BASIC17.42■□□□□ 0.38
Clca3a2Q9EQR4 Gm42882-201ENSMUST00000201788 506 ntTSL 3 BASIC17.42■□□□□ 0.38
Clca3a2Q9EQR4 Timp4-202ENSMUST00000205131 945 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Clca3a2Q9EQR4 Gm30085-201ENSMUST00000209694 594 ntTSL 3 BASIC17.42■□□□□ 0.38
Clca3a2Q9EQR4 AC061963.1-203ENSMUST00000213473 453 ntTSL 3 BASIC17.42■□□□□ 0.38
Clca3a2Q9EQR4 Zfand3-202ENSMUST00000226208 923 ntAPPRIS P1 BASIC17.42■□□□□ 0.38
Clca3a2Q9EQR4 Ckm-201ENSMUST00000003643 1235 ntTSL 5 BASIC17.42■□□□□ 0.38
Clca3a2Q9EQR4 Mtmr1-202ENSMUST00000114601 4640 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
Clca3a2Q9EQR4 Spg7-209ENSMUST00000149248 2896 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Clca3a2Q9EQR4 Sh3bp1-202ENSMUST00000061239 1917 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Clca3a2Q9EQR4 Fez2-201ENSMUST00000070039 1939 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
Clca3a2Q9EQR4 Gls2-201ENSMUST00000044776 2573 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Clca3a2Q9EQR4 Larp1-201ENSMUST00000071487 6614 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
Clca3a2Q9EQR4 Soat2-201ENSMUST00000023806 2213 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Clca3a2Q9EQR4 Arrb2-202ENSMUST00000084954 1732 ntTSL 5 BASIC17.41■□□□□ 0.38
Clca3a2Q9EQR4 Rock2-201ENSMUST00000020904 7644 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
Clca3a2Q9EQR4 Kcnk3-201ENSMUST00000066295 3811 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Clca3a2Q9EQR4 Smim27-201ENSMUST00000129758 1044 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Clca3a2Q9EQR4 AC140264.2-202ENSMUST00000218746 817 ntBASIC17.41■□□□□ 0.38
Clca3a2Q9EQR4 Nat8-201ENSMUST00000032073 1123 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Clca3a2Q9EQR4 Zfp580-201ENSMUST00000069324 1096 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Clca3a2Q9EQR4 Cldn3-201ENSMUST00000094245 1259 ntAPPRIS P1 BASIC17.41■□□□□ 0.38
Clca3a2Q9EQR4 Selenom-201ENSMUST00000094469 707 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Clca3a2Q9EQR4 Tmem39b-201ENSMUST00000102588 1810 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Clca3a2Q9EQR4 Cfap206-202ENSMUST00000108136 1688 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Clca3a2Q9EQR4 Atp8b2-202ENSMUST00000107396 5705 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
Clca3a2Q9EQR4 Trnt1-202ENSMUST00000113247 1934 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Clca3a2Q9EQR4 AC163637.2-201ENSMUST00000213826 1945 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
Clca3a2Q9EQR4 Chka-201ENSMUST00000025760 2319 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
Clca3a2Q9EQR4 Anapc16-201ENSMUST00000020307 1379 ntTSL 2 BASIC17.4■□□□□ 0.38
Clca3a2Q9EQR4 AL591207.1-203ENSMUST00000222401 1380 ntTSL 5 BASIC17.4■□□□□ 0.38
Clca3a2Q9EQR4 Egln2-202ENSMUST00000108382 1756 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
Clca3a2Q9EQR4 Cacnb3-201ENSMUST00000003442 2819 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Clca3a2Q9EQR4 Anks1b-217ENSMUST00000182550 1868 ntTSL 5 BASIC17.4■□□□□ 0.38
Clca3a2Q9EQR4 Sco2-201ENSMUST00000167643 1143 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Clca3a2Q9EQR4 Rab3c-203ENSMUST00000224180 967 ntBASIC17.4■□□□□ 0.38
Retrieved 100 of 76,532 protein–RNA pairs in 86.2 ms