Protein–RNA interactions for Protein: Q9EQM3

Nkx2-4, Homeobox protein Nkx-2.4, mousemouse

Predictions only

Length 354 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-4Q9EQM3 Gm2274-201ENSMUST00000184539 609 ntBASIC18.81■□□□□ 0.6
Nkx2-4Q9EQM3 Gm43353-201ENSMUST00000199224 1295 ntBASIC18.81■□□□□ 0.6
Nkx2-4Q9EQM3 Gm45631-201ENSMUST00000210318 1244 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Nkx2-4Q9EQM3 Pym1-201ENSMUST00000065210 1156 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Nkx2-4Q9EQM3 Tbpl1-201ENSMUST00000095794 1195 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Nkx2-4Q9EQM3 Blcap-202ENSMUST00000109528 2056 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Nkx2-4Q9EQM3 Cers2-201ENSMUST00000015858 2216 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Nkx2-4Q9EQM3 Slc16a10-201ENSMUST00000092566 5397 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Nkx2-4Q9EQM3 Lrrc36-204ENSMUST00000213547 2396 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
Nkx2-4Q9EQM3 2900052L18Rik-201ENSMUST00000139014 1588 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Nkx2-4Q9EQM3 Cpne2-202ENSMUST00000109537 2121 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Nkx2-4Q9EQM3 Hyal2-207ENSMUST00000195752 2062 ntAPPRIS P2 TSL 5 BASIC18.8■□□□□ 0.6
Nkx2-4Q9EQM3 Disc1-208ENSMUST00000122389 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Nkx2-4Q9EQM3 Gnpnat1-201ENSMUST00000046191 2788 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Nkx2-4Q9EQM3 1700096K18Rik-201ENSMUST00000188465 1454 ntBASIC18.8■□□□□ 0.6
Nkx2-4Q9EQM3 Gm15952-201ENSMUST00000122858 490 ntTSL 3 BASIC18.8■□□□□ 0.6
Nkx2-4Q9EQM3 Psmd13-209ENSMUST00000164681 726 ntTSL 5 BASIC18.8■□□□□ 0.6
Nkx2-4Q9EQM3 Slc35d2-204ENSMUST00000222168 472 ntTSL 3 BASIC18.8■□□□□ 0.6
Nkx2-4Q9EQM3 AC154471.1-201ENSMUST00000224418 436 ntBASIC18.8■□□□□ 0.6
Nkx2-4Q9EQM3 Lce1h-201ENSMUST00000051521 706 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Nkx2-4Q9EQM3 Fkbp9-201ENSMUST00000031795 3009 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Nkx2-4Q9EQM3 A230050P20Rik-201ENSMUST00000043911 1683 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Nkx2-4Q9EQM3 BC037034-201ENSMUST00000048421 2490 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Nkx2-4Q9EQM3 Eif2b4-212ENSMUST00000202758 1767 ntTSL 5 BASIC18.79■□□□□ 0.6
Nkx2-4Q9EQM3 Esco1-202ENSMUST00000097670 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Nkx2-4Q9EQM3 Tsfm-202ENSMUST00000120547 1271 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Nkx2-4Q9EQM3 Zfp629-206ENSMUST00000132524 215 ntTSL 5 BASIC18.79■□□□□ 0.6
Nkx2-4Q9EQM3 Mocs1-202ENSMUST00000165390 729 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Nkx2-4Q9EQM3 Gm20544-201ENSMUST00000174338 690 ntTSL 3 BASIC18.79■□□□□ 0.6
Nkx2-4Q9EQM3 Hebp1-201ENSMUST00000045855 1058 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Nkx2-4Q9EQM3 Timm8a2-201ENSMUST00000045976 913 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Nkx2-4Q9EQM3 Mrps6-201ENSMUST00000047429 846 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Nkx2-4Q9EQM3 Ptges3-202ENSMUST00000084771 1559 ntTSL 5 BASIC18.79■□□□□ 0.6
Nkx2-4Q9EQM3 Agap2-201ENSMUST00000039259 5633 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Nkx2-4Q9EQM3 Gaa-202ENSMUST00000106258 1369 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Nkx2-4Q9EQM3 Cadps-202ENSMUST00000112657 5455 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
Nkx2-4Q9EQM3 Gm26708-203ENSMUST00000208236 1624 ntTSL 5 BASIC18.78■□□□□ 0.6
Nkx2-4Q9EQM3 Fev-201ENSMUST00000068631 1490 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Nkx2-4Q9EQM3 Kis2-201ENSMUST00000133214 1717 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Nkx2-4Q9EQM3 Echdc2-204ENSMUST00000116309 1238 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Nkx2-4Q9EQM3 Atp6v0b-208ENSMUST00000150204 935 ntTSL 5 BASIC18.78■□□□□ 0.6
Nkx2-4Q9EQM3 Gm17661-201ENSMUST00000170317 270 ntBASIC18.78■□□□□ 0.6
Nkx2-4Q9EQM3 4930544I03Rik-201ENSMUST00000181184 1276 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Nkx2-4Q9EQM3 Hsbp1-202ENSMUST00000212468 638 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
Nkx2-4Q9EQM3 AC134329.2-201ENSMUST00000217897 428 ntBASIC18.78■□□□□ 0.6
Nkx2-4Q9EQM3 Eml2-202ENSMUST00000117338 2765 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
Nkx2-4Q9EQM3 Noc2l-201ENSMUST00000179543 2785 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Nkx2-4Q9EQM3 Larp1b-206ENSMUST00000191872 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Nkx2-4Q9EQM3 Lsp1-204ENSMUST00000105967 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Nkx2-4Q9EQM3 Mdfi-201ENSMUST00000035375 1371 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Nkx2-4Q9EQM3 Etv4-212ENSMUST00000164750 2336 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
Nkx2-4Q9EQM3 Trak1-208ENSMUST00000210636 2197 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Nkx2-4Q9EQM3 Gtpbp6-201ENSMUST00000077220 1617 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Nkx2-4Q9EQM3 Il15ra-201ENSMUST00000078834 1600 ntAPPRIS P3 TSL 5 BASIC18.78■□□□□ 0.6
Nkx2-4Q9EQM3 Zyg11a-202ENSMUST00000106690 2421 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
Nkx2-4Q9EQM3 Hey1-201ENSMUST00000042412 2423 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Nkx2-4Q9EQM3 Pcmtd1-201ENSMUST00000061280 5232 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Nkx2-4Q9EQM3 Gpr162-201ENSMUST00000046893 2676 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Nkx2-4Q9EQM3 Tcp11-201ENSMUST00000042692 1984 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
Nkx2-4Q9EQM3 Mtg1-201ENSMUST00000036977 1595 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Nkx2-4Q9EQM3 Rcor1-201ENSMUST00000084968 5684 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
Nkx2-4Q9EQM3 Asph-217ENSMUST00000146441 2576 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Nkx2-4Q9EQM3 Ramp2-204ENSMUST00000129680 1178 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.6
Nkx2-4Q9EQM3 4833413E03Rik-201ENSMUST00000013706 1091 ntTSL 5 BASIC18.77■□□□□ 0.6
Nkx2-4Q9EQM3 Gm25016-201ENSMUST00000158399 131 ntBASIC18.77■□□□□ 0.6
Nkx2-4Q9EQM3 Gm17092-201ENSMUST00000166606 698 ntTSL 2 BASIC18.77■□□□□ 0.6
Nkx2-4Q9EQM3 Rpl39l-201ENSMUST00000044103 805 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Nkx2-4Q9EQM3 Olfr464-201ENSMUST00000074874 1084 ntAPPRIS P1 BASIC18.77■□□□□ 0.6
Nkx2-4Q9EQM3 Alg1-202ENSMUST00000100196 1755 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.6
Nkx2-4Q9EQM3 Rrs1-201ENSMUST00000072079 2048 ntAPPRIS P1 BASIC18.77■□□□□ 0.6
Nkx2-4Q9EQM3 Syde1-201ENSMUST00000040580 3288 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Nkx2-4Q9EQM3 Slc11a1-211ENSMUST00000187516 1893 ntAPPRIS ALT2 TSL 5 BASIC18.77■□□□□ 0.6
Nkx2-4Q9EQM3 AL591207.1-203ENSMUST00000222401 1380 ntTSL 5 BASIC18.77■□□□□ 0.6
Nkx2-4Q9EQM3 Nsfl1c-201ENSMUST00000028949 1364 ntAPPRIS ALT1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Nkx2-4Q9EQM3 Hand2-201ENSMUST00000040104 2351 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Nkx2-4Q9EQM3 Lmtk3-201ENSMUST00000072580 4807 ntAPPRIS P2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Nkx2-4Q9EQM3 Fbxl15-201ENSMUST00000026256 1348 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Nkx2-4Q9EQM3 Zfp689-202ENSMUST00000106299 1417 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Nkx2-4Q9EQM3 Krtap1-4-201ENSMUST00000100479 593 ntAPPRIS P1 BASIC18.76■□□□□ 0.59
Nkx2-4Q9EQM3 Slc25a41-202ENSMUST00000169012 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Nkx2-4Q9EQM3 Gm44973-201ENSMUST00000207050 1003 ntAPPRIS P1 TSL 3 BASIC18.76■□□□□ 0.59
Nkx2-4Q9EQM3 Zfp524-203ENSMUST00000209030 1128 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
Nkx2-4Q9EQM3 Casp3-203ENSMUST00000210534 583 ntTSL 5 BASIC18.76■□□□□ 0.59
Nkx2-4Q9EQM3 Ephx4-201ENSMUST00000049146 1279 ntAPPRIS P1 TSL 2 BASIC18.76■□□□□ 0.59
Nkx2-4Q9EQM3 Gfi1-202ENSMUST00000065478 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Nkx2-4Q9EQM3 Acvr1c-204ENSMUST00000112608 1497 ntAPPRIS ALT2 TSL 5 BASIC18.76■□□□□ 0.59
Nkx2-4Q9EQM3 Hsf1-201ENSMUST00000072838 2018 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Nkx2-4Q9EQM3 Hoxa10-202ENSMUST00000125581 2565 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Nkx2-4Q9EQM3 Ppp1r1b-204ENSMUST00000137634 1343 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Nkx2-4Q9EQM3 Raph1-202ENSMUST00000090293 2409 ntAPPRIS ALT2 TSL 5 BASIC18.75■□□□□ 0.59
Nkx2-4Q9EQM3 Pdp1-204ENSMUST00000108299 2588 ntAPPRIS ALT2 TSL 2 BASIC18.75■□□□□ 0.59
Nkx2-4Q9EQM3 March2-206ENSMUST00000173329 2566 ntTSL 2 BASIC18.75■□□□□ 0.59
Nkx2-4Q9EQM3 Isca1-201ENSMUST00000057115 1942 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Nkx2-4Q9EQM3 Mprip-202ENSMUST00000072031 8718 ntAPPRIS P4 TSL 1 (best) BASIC18.75■□□□□ 0.59
Nkx2-4Q9EQM3 Gm10654-201ENSMUST00000098653 1633 ntBASIC18.74■□□□□ 0.59
Nkx2-4Q9EQM3 Pick1-201ENSMUST00000018295 1977 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Nkx2-4Q9EQM3 Plpbp-202ENSMUST00000098851 1368 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Nkx2-4Q9EQM3 Anapc13-203ENSMUST00000188398 727 ntAPPRIS P1 TSL 2 BASIC18.74■□□□□ 0.59
Nkx2-4Q9EQM3 AC133598.3-202ENSMUST00000224219 531 ntBASIC18.74■□□□□ 0.59
Nkx2-4Q9EQM3 Mgarp-202ENSMUST00000108046 1409 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Retrieved 100 of 76,532 protein–RNA pairs in 22.8 ms