Protein–RNA interactions for Protein: Q9EQH3

Vps35, Vacuolar protein sorting-associated protein 35, mousemouse

Known RBP Predictions only

Length 796 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps35Q9EQH3 Anks6-202ENSMUST00000107747 3980 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Vps35Q9EQH3 Tob1-201ENSMUST00000041589 2288 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Vps35Q9EQH3 Nptxr-201ENSMUST00000023057 5004 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Vps35Q9EQH3 Rnf26-201ENSMUST00000056328 2724 ntAPPRIS P2 BASIC18.25■□□□□ 0.51
Vps35Q9EQH3 Mxi1-201ENSMUST00000003870 5156 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Vps35Q9EQH3 Slc30a4-202ENSMUST00000099457 3170 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Vps35Q9EQH3 1810059H22Rik-205ENSMUST00000204570 690 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Vps35Q9EQH3 Gm45890-201ENSMUST00000212043 1026 ntTSL 5 BASIC18.25■□□□□ 0.51
Vps35Q9EQH3 6230400D17Rik-202ENSMUST00000224976 1019 ntBASIC18.25■□□□□ 0.51
Vps35Q9EQH3 Cst3-201ENSMUST00000028938 860 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Vps35Q9EQH3 Mtmr1-201ENSMUST00000015358 4634 ntAPPRIS P2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Vps35Q9EQH3 Foxo3-204ENSMUST00000175881 2535 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Vps35Q9EQH3 Zbtb7a-201ENSMUST00000048128 5938 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Vps35Q9EQH3 Galnt9-201ENSMUST00000040001 2883 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Vps35Q9EQH3 Socs6-203ENSMUST00000125362 2814 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Vps35Q9EQH3 Ube2d2a-201ENSMUST00000167406 2393 ntAPPRIS P1 TSL 5 BASIC18.24■□□□□ 0.51
Vps35Q9EQH3 S1pr4-201ENSMUST00000053646 2386 ntAPPRIS P1 BASIC18.24■□□□□ 0.51
Vps35Q9EQH3 Ttc19-201ENSMUST00000050646 3410 ntAPPRIS P3 TSL 1 (best) BASIC18.24■□□□□ 0.51
Vps35Q9EQH3 Pparg-202ENSMUST00000171644 2125 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Vps35Q9EQH3 Cldn3-201ENSMUST00000094245 1259 ntAPPRIS P1 BASIC18.24■□□□□ 0.51
Vps35Q9EQH3 Slc16a10-202ENSMUST00000213488 2325 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Vps35Q9EQH3 Intu-201ENSMUST00000061590 1589 ntAPPRIS ALT2 TSL 2 BASIC18.24■□□□□ 0.51
Vps35Q9EQH3 Tradd-201ENSMUST00000034359 1689 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Vps35Q9EQH3 4930452B06Rik-201ENSMUST00000102996 2681 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Vps35Q9EQH3 Arx-201ENSMUST00000046565 2881 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Vps35Q9EQH3 Pwwp2b-201ENSMUST00000093993 3057 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Vps35Q9EQH3 Stim2-204ENSMUST00000201469 4892 ntAPPRIS ALT2 TSL 5 BASIC18.23■□□□□ 0.51
Vps35Q9EQH3 Gm43672-201ENSMUST00000199072 1731 ntBASIC18.23■□□□□ 0.51
Vps35Q9EQH3 Smox-209ENSMUST00000110189 1919 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Vps35Q9EQH3 Galnt1-206ENSMUST00000170243 4108 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Vps35Q9EQH3 Dtwd2-201ENSMUST00000025383 2476 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Vps35Q9EQH3 Klhl36-201ENSMUST00000034287 2181 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Vps35Q9EQH3 Plin5-202ENSMUST00000113072 1986 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Vps35Q9EQH3 Pcyt2-201ENSMUST00000026129 1881 ntAPPRIS P3 TSL 1 (best) BASIC18.23■□□□□ 0.51
Vps35Q9EQH3 Glra1-203ENSMUST00000108853 1797 ntTSL 5 BASIC18.23■□□□□ 0.51
Vps35Q9EQH3 Klhdc4-205ENSMUST00000174192 1584 ntTSL 5 BASIC18.23■□□□□ 0.51
Vps35Q9EQH3 Aunip-201ENSMUST00000105866 1275 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Vps35Q9EQH3 Smim27-201ENSMUST00000129758 1044 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Vps35Q9EQH3 Coro1a-209ENSMUST00000173108 1170 ntTSL 5 BASIC18.23■□□□□ 0.51
Vps35Q9EQH3 Nr2c2ap-202ENSMUST00000211898 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Vps35Q9EQH3 Ttc32-201ENSMUST00000085741 1000 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Vps35Q9EQH3 Tmod1-201ENSMUST00000107773 3158 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
Vps35Q9EQH3 Ccdc6-203ENSMUST00000147545 5511 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
Vps35Q9EQH3 Gm13509-201ENSMUST00000119733 1308 ntBASIC18.23■□□□□ 0.51
Vps35Q9EQH3 Ndel1-203ENSMUST00000108672 1653 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Vps35Q9EQH3 Leng1-201ENSMUST00000019878 2222 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Vps35Q9EQH3 Pqlc1-201ENSMUST00000070135 1911 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Vps35Q9EQH3 Ube2q2-201ENSMUST00000059555 3456 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
Vps35Q9EQH3 AC175538.2-202ENSMUST00000224997 1057 ntAPPRIS P1 BASIC18.22■□□□□ 0.51
Vps35Q9EQH3 Gm37563-201ENSMUST00000192580 1513 ntBASIC18.22■□□□□ 0.51
Vps35Q9EQH3 Rxra-201ENSMUST00000077257 4905 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Vps35Q9EQH3 Ripk2-201ENSMUST00000037035 2692 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Vps35Q9EQH3 Gm8309-201ENSMUST00000206627 1448 ntBASIC18.22■□□□□ 0.51
Vps35Q9EQH3 Lin7a-203ENSMUST00000218031 1769 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Vps35Q9EQH3 Obsl1-202ENSMUST00000113567 5679 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Vps35Q9EQH3 Krt4-201ENSMUST00000023797 2132 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Vps35Q9EQH3 Slc10a4-201ENSMUST00000031127 2106 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Vps35Q9EQH3 Actl6a-201ENSMUST00000029214 2010 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Vps35Q9EQH3 Nkd1-203ENSMUST00000211113 1474 ntTSL 5 BASIC18.21■□□□□ 0.51
Vps35Q9EQH3 Gorasp2-202ENSMUST00000112201 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
Vps35Q9EQH3 Creld1-201ENSMUST00000032422 2306 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Vps35Q9EQH3 Ube2b-202ENSMUST00000109086 585 ntAPPRIS P1 TSL 2 BASIC18.21■□□□□ 0.51
Vps35Q9EQH3 Gm10153-202ENSMUST00000210290 963 ntAPPRIS P1 BASIC18.21■□□□□ 0.51
Vps35Q9EQH3 Znrf4-201ENSMUST00000052211 1236 ntAPPRIS P1 BASIC18.21■□□□□ 0.51
Vps35Q9EQH3 Dmtn-210ENSMUST00000228824 2377 ntBASIC18.21■□□□□ 0.51
Vps35Q9EQH3 Snapc2-201ENSMUST00000011981 1536 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Vps35Q9EQH3 Gm15853-202ENSMUST00000195518 2041 ntBASIC18.21■□□□□ 0.51
Vps35Q9EQH3 Irgq-201ENSMUST00000049020 6083 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Vps35Q9EQH3 Rab40c-207ENSMUST00000167626 2506 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Vps35Q9EQH3 Macrod2-202ENSMUST00000078027 1669 ntAPPRIS P2 TSL 5 BASIC18.21■□□□□ 0.51
Vps35Q9EQH3 Spire1-203ENSMUST00000115050 5405 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
Vps35Q9EQH3 Swsap1-201ENSMUST00000053583 1838 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Vps35Q9EQH3 Cdkl3-207ENSMUST00000109080 2749 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.5
Vps35Q9EQH3 Gm5953-201ENSMUST00000220644 2616 ntBASIC18.2■□□□□ 0.5
Vps35Q9EQH3 Ptgfrn-201ENSMUST00000102694 5902 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Vps35Q9EQH3 Wdr20-205ENSMUST00000193053 1351 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Vps35Q9EQH3 Gsto2-201ENSMUST00000056159 1351 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Vps35Q9EQH3 Aifm2-204ENSMUST00000105455 1512 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Vps35Q9EQH3 Unc13a-208ENSMUST00000177517 5654 ntAPPRIS ALT2 TSL 5 BASIC18.2■□□□□ 0.5
Vps35Q9EQH3 Scaf8-201ENSMUST00000076734 4869 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Vps35Q9EQH3 Gm11627-202ENSMUST00000107081 818 ntAPPRIS P1 TSL 2 BASIC18.2■□□□□ 0.5
Vps35Q9EQH3 Tspan2os-201ENSMUST00000146624 590 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Vps35Q9EQH3 Gm26524-201ENSMUST00000192339 390 ntBASIC18.2■□□□□ 0.5
Vps35Q9EQH3 Sohlh1-201ENSMUST00000076989 1289 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Vps35Q9EQH3 Pacsin3-203ENSMUST00000111349 1993 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Vps35Q9EQH3 Fgf11-201ENSMUST00000011285 2534 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Vps35Q9EQH3 Crocc-211ENSMUST00000168157 6244 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Vps35Q9EQH3 Prkci-201ENSMUST00000108249 4708 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Vps35Q9EQH3 Ntn1-201ENSMUST00000021284 5738 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
Vps35Q9EQH3 Wasf3-201ENSMUST00000016143 5196 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Vps35Q9EQH3 Map7d2-203ENSMUST00000112471 3670 ntAPPRIS P3 TSL 5 BASIC18.19■□□□□ 0.5
Vps35Q9EQH3 AC122335.2-201ENSMUST00000213901 6181 ntBASIC18.19■□□□□ 0.5
Vps35Q9EQH3 Sec61a2-202ENSMUST00000102981 2448 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Vps35Q9EQH3 Cdc14b-201ENSMUST00000039318 5859 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
Vps35Q9EQH3 AI480526-205ENSMUST00000160255 1095 ntTSL 5 BASIC18.19■□□□□ 0.5
Vps35Q9EQH3 Gm29257-201ENSMUST00000186115 639 ntBASIC18.19■□□□□ 0.5
Vps35Q9EQH3 Fkbp11-201ENSMUST00000003445 731 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Vps35Q9EQH3 Trim58-201ENSMUST00000075084 2192 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Vps35Q9EQH3 P2rx4-202ENSMUST00000081554 1887 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Vps35Q9EQH3 Itgb4-210ENSMUST00000169928 6160 ntAPPRIS P2 TSL 5 BASIC18.19■□□□□ 0.5
Retrieved 100 of 76,532 protein–RNA pairs in 19.6 ms