Protein–RNA interactions for Protein: Q9DC53

Cpne8, Copine-8, mousemouse

Predictions only

Length 577 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpne8Q9DC53 Gm10849-201ENSMUST00000100397 618 ntBASIC19.07■□□□□ 0.64
Cpne8Q9DC53 Lhpp-202ENSMUST00000106170 999 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Cpne8Q9DC53 Zfp444-202ENSMUST00000108565 849 ntTSL 3 BASIC19.07■□□□□ 0.64
Cpne8Q9DC53 Foxi3-202ENSMUST00000163089 1278 ntAPPRIS ALT2 TSL 5 BASIC19.07■□□□□ 0.64
Cpne8Q9DC53 Apoe-205ENSMUST00000173739 1221 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Cpne8Q9DC53 Apoe-209ENSMUST00000174355 1104 ntAPPRIS P1 TSL 5 BASIC19.07■□□□□ 0.64
Cpne8Q9DC53 Apoe-201ENSMUST00000003066 1128 ntAPPRIS P1 TSL 5 BASIC19.07■□□□□ 0.64
Cpne8Q9DC53 Fkbp11-201ENSMUST00000003445 731 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Cpne8Q9DC53 Gpr3-201ENSMUST00000052090 1116 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Cpne8Q9DC53 Foxi3-201ENSMUST00000069634 1206 ntAPPRIS P2 TSL 5 BASIC19.07■□□□□ 0.64
Cpne8Q9DC53 Elmo2-204ENSMUST00000103088 3052 ntAPPRIS ALT2 TSL 5 BASIC19.07■□□□□ 0.64
Cpne8Q9DC53 Acp4-203ENSMUST00000118216 1454 ntAPPRIS P1 TSL 5 BASIC19.07■□□□□ 0.64
Cpne8Q9DC53 Pou2f2-205ENSMUST00000108417 1937 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Cpne8Q9DC53 Gsx2-201ENSMUST00000040477 1665 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Cpne8Q9DC53 Coq5-201ENSMUST00000040421 2037 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Cpne8Q9DC53 Prdm6-203ENSMUST00000115399 2227 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
Cpne8Q9DC53 Wnt10b-202ENSMUST00000166022 1594 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Cpne8Q9DC53 Krt80-201ENSMUST00000077196 1774 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Cpne8Q9DC53 Spc25-202ENSMUST00000112320 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
Cpne8Q9DC53 Mael-201ENSMUST00000038782 1546 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Cpne8Q9DC53 Bin2-204ENSMUST00000182775 1908 ntTSL 5 BASIC19.06■□□□□ 0.64
Cpne8Q9DC53 Nfe2l3-203ENSMUST00000160133 1125 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Cpne8Q9DC53 Lrrc47-201ENSMUST00000030894 3395 ntAPPRIS P2 TSL 1 (best) BASIC19.06■□□□□ 0.64
Cpne8Q9DC53 Gm43042-201ENSMUST00000198676 1820 ntTSL 5 BASIC19.06■□□□□ 0.64
Cpne8Q9DC53 Mir155hg-202ENSMUST00000185662 1362 ntTSL 5 BASIC19.06■□□□□ 0.64
Cpne8Q9DC53 Camkk2-211ENSMUST00000200109 2751 ntAPPRIS P3 TSL 1 (best) BASIC19.05■□□□□ 0.64
Cpne8Q9DC53 Mrpl15-203ENSMUST00000130201 1894 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Cpne8Q9DC53 Clic1-201ENSMUST00000007257 1466 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Cpne8Q9DC53 Tmem54-203ENSMUST00000106064 1066 ntAPPRIS P3 TSL 1 (best) BASIC19.05■□□□□ 0.64
Cpne8Q9DC53 Wnt16-203ENSMUST00000148639 1168 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Cpne8Q9DC53 Sirpa-209ENSMUST00000160276 876 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Cpne8Q9DC53 Akr1a1-201ENSMUST00000030455 1420 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Cpne8Q9DC53 Krt77-201ENSMUST00000087996 2930 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Cpne8Q9DC53 C1ql3-201ENSMUST00000061545 2535 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Cpne8Q9DC53 U2af2-201ENSMUST00000005041 2183 ntAPPRIS ALT1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Cpne8Q9DC53 Mtrf1l-201ENSMUST00000019908 2588 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Cpne8Q9DC53 4930444P10Rik-203ENSMUST00000151004 1001 ntAPPRIS P2 TSL 3 BASIC19.04■□□□□ 0.64
Cpne8Q9DC53 AV356131-201ENSMUST00000206201 750 ntBASIC19.04■□□□□ 0.64
Cpne8Q9DC53 Gm18671-201ENSMUST00000214826 683 ntBASIC19.04■□□□□ 0.64
Cpne8Q9DC53 AC142113.1-201ENSMUST00000214931 801 ntTSL 5 BASIC19.04■□□□□ 0.64
Cpne8Q9DC53 Erh-205ENSMUST00000218740 981 ntTSL 2 BASIC19.04■□□□□ 0.64
Cpne8Q9DC53 Eif4enif1-203ENSMUST00000110049 3614 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Cpne8Q9DC53 Diras1-201ENSMUST00000055125 2953 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Cpne8Q9DC53 Tfdp2-209ENSMUST00000188750 1713 ntAPPRIS ALT2 TSL 5 BASIC19.03■□□□□ 0.64
Cpne8Q9DC53 Hnrnph3-201ENSMUST00000020263 2213 ntAPPRIS P3 TSL 5 BASIC19.03■□□□□ 0.64
Cpne8Q9DC53 Yjefn3-203ENSMUST00000180068 629 ntTSL 5 BASIC19.03■□□□□ 0.64
Cpne8Q9DC53 a-201ENSMUST00000029123 731 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Cpne8Q9DC53 Ints6-201ENSMUST00000053959 4993 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Cpne8Q9DC53 Gm6209-202ENSMUST00000194629 1506 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Cpne8Q9DC53 1600012H06Rik-201ENSMUST00000052691 2506 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Cpne8Q9DC53 Rcor1-201ENSMUST00000084968 5684 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
Cpne8Q9DC53 Fmnl2-204ENSMUST00000127122 5508 ntTSL 5 BASIC19.02■□□□□ 0.64
Cpne8Q9DC53 Rasl10b-204ENSMUST00000175848 3249 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
Cpne8Q9DC53 Tgds-204ENSMUST00000228543 1594 ntBASIC19.02■□□□□ 0.64
Cpne8Q9DC53 Car11-201ENSMUST00000003360 1585 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Cpne8Q9DC53 Atxn7-203ENSMUST00000223880 2946 ntAPPRIS P2 BASIC19.02■□□□□ 0.64
Cpne8Q9DC53 Srsf1-201ENSMUST00000079866 2948 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
Cpne8Q9DC53 Jsrp1-201ENSMUST00000020435 955 ntAPPRIS ALT2 TSL 2 BASIC19.02■□□□□ 0.64
Cpne8Q9DC53 Sds-201ENSMUST00000066540 1207 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Cpne8Q9DC53 Vav3-201ENSMUST00000046864 5019 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Cpne8Q9DC53 Cyp26c1-201ENSMUST00000073391 1747 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
Cpne8Q9DC53 Idnk-202ENSMUST00000109868 1462 ntTSL 1 (best) BASIC19.02■□□□□ 0.63
Cpne8Q9DC53 Ccdc59-201ENSMUST00000020049 1813 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
Cpne8Q9DC53 Sqor-201ENSMUST00000005953 1804 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
Cpne8Q9DC53 Cyth2-201ENSMUST00000056820 2527 ntAPPRIS ALT1 TSL 1 (best) BASIC19.02■□□□□ 0.63
Cpne8Q9DC53 Lins1-203ENSMUST00000121777 2729 ntAPPRIS P3 TSL 2 BASIC19.02■□□□□ 0.63
Cpne8Q9DC53 Ube2cbp-201ENSMUST00000034986 1790 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Cpne8Q9DC53 Htr6-202ENSMUST00000105802 2341 ntAPPRIS P1 TSL 5 BASIC19.01■□□□□ 0.63
Cpne8Q9DC53 Lancl2-201ENSMUST00000050077 2509 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Cpne8Q9DC53 Il17rb-201ENSMUST00000016110 2061 ntAPPRIS P2 TSL 1 (best) BASIC19.01■□□□□ 0.63
Cpne8Q9DC53 Htr7-201ENSMUST00000099505 1606 ntTSL 5 BASIC19.01■□□□□ 0.63
Cpne8Q9DC53 E130218I03Rik-201ENSMUST00000122952 943 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Cpne8Q9DC53 Mpig6b-202ENSMUST00000174190 729 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Cpne8Q9DC53 Itm2c-203ENSMUST00000185569 1465 ntTSL 5 BASIC19.01■□□□□ 0.63
Cpne8Q9DC53 Agap3-205ENSMUST00000199856 2685 ntTSL 5 BASIC19.01■□□□□ 0.63
Cpne8Q9DC53 Nfib-206ENSMUST00000107248 3294 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Cpne8Q9DC53 Smim15-205ENSMUST00000225972 2097 ntAPPRIS P1 BASIC19.01■□□□□ 0.63
Cpne8Q9DC53 Eif3j2-201ENSMUST00000057110 2379 ntAPPRIS P1 BASIC19■□□□□ 0.63
Cpne8Q9DC53 Zcchc6-207ENSMUST00000225576 2499 ntBASIC19■□□□□ 0.63
Cpne8Q9DC53 Prdm8-201ENSMUST00000112959 4553 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Cpne8Q9DC53 2700046G09Rik-201ENSMUST00000181612 1641 ntTSL 2 BASIC19■□□□□ 0.63
Cpne8Q9DC53 AC163637.2-201ENSMUST00000213826 1945 ntAPPRIS P1 TSL 2 BASIC19■□□□□ 0.63
Cpne8Q9DC53 Ano10-206ENSMUST00000216670 2108 ntTSL 1 (best) BASIC19■□□□□ 0.63
Cpne8Q9DC53 Zfp219-204ENSMUST00000226522 2804 ntAPPRIS P2 BASIC19■□□□□ 0.63
Cpne8Q9DC53 Gm4553-201ENSMUST00000168049 714 ntAPPRIS ALT2 BASIC19■□□□□ 0.63
Cpne8Q9DC53 AC160393.1-201ENSMUST00000218378 1279 ntBASIC19■□□□□ 0.63
Cpne8Q9DC53 Trim68-201ENSMUST00000082175 2388 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Cpne8Q9DC53 Panx2-203ENSMUST00000162424 3391 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Cpne8Q9DC53 Lysmd4-209ENSMUST00000208998 2110 ntAPPRIS P2 TSL 1 (best) BASIC19■□□□□ 0.63
Cpne8Q9DC53 Schip1-203ENSMUST00000170788 1730 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Cpne8Q9DC53 Usp13-202ENSMUST00000108228 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
Cpne8Q9DC53 Zfp768-201ENSMUST00000060783 2356 ntAPPRIS P2 TSL 1 (best) BASIC18.99■□□□□ 0.63
Cpne8Q9DC53 Kansl1-204ENSMUST00000106972 5427 ntAPPRIS ALT2 TSL 5 BASIC18.99■□□□□ 0.63
Cpne8Q9DC53 Eva1a-201ENSMUST00000042974 1773 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Cpne8Q9DC53 Tradd-201ENSMUST00000034359 1689 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Cpne8Q9DC53 Vac14-201ENSMUST00000034190 3069 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Cpne8Q9DC53 Atraid-201ENSMUST00000013766 966 ntAPPRIS P2 TSL 1 (best) BASIC18.99■□□□□ 0.63
Cpne8Q9DC53 Gadd45b-201ENSMUST00000015456 1284 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Cpne8Q9DC53 Gm38165-201ENSMUST00000191654 486 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Cpne8Q9DC53 Cdkl3-203ENSMUST00000109076 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
Retrieved 100 of 76,532 protein–RNA pairs in 19.2 ms