Protein–RNA interactions for Protein: Q9D968

Hcfc2, Host cell factor 2, mousemouse

Predictions only

Length 241 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hcfc2Q9D968 Lmtk2-201ENSMUST00000041804 8114 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Hcfc2Q9D968 Fam171a2-201ENSMUST00000049057 3118 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Hcfc2Q9D968 Krt4-201ENSMUST00000023797 2132 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Hcfc2Q9D968 Pycr2-201ENSMUST00000027802 1580 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Hcfc2Q9D968 Fam53a-202ENSMUST00000065119 2009 ntAPPRIS P2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Hcfc2Q9D968 Msl1-204ENSMUST00000107487 2836 ntAPPRIS ALT2 TSL 2 BASIC13.88□□□□□ -0.19
Hcfc2Q9D968 Hps4-201ENSMUST00000035279 2836 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Hcfc2Q9D968 Nsmf-202ENSMUST00000074422 2824 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Hcfc2Q9D968 Sh3gl2-203ENSMUST00000107188 2286 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Hcfc2Q9D968 Matk-205ENSMUST00000121205 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Hcfc2Q9D968 Nol7-201ENSMUST00000071926 1800 ntAPPRIS P2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Hcfc2Q9D968 Aire-203ENSMUST00000105396 1749 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Hcfc2Q9D968 Aire-214ENSMUST00000154374 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Hcfc2Q9D968 Aire-215ENSMUST00000155021 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Hcfc2Q9D968 Sumf1-206ENSMUST00000172188 723 ntTSL 5 BASIC13.88□□□□□ -0.19
Hcfc2Q9D968 Cyc1-201ENSMUST00000023210 1194 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Hcfc2Q9D968 Cep135-202ENSMUST00000121979 5537 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
Hcfc2Q9D968 Mgarp-202ENSMUST00000108046 1409 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Hcfc2Q9D968 Nhs-201ENSMUST00000081569 4881 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
Hcfc2Q9D968 Bmi1-201ENSMUST00000028071 3594 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Hcfc2Q9D968 Slc16a3-201ENSMUST00000070653 2272 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Hcfc2Q9D968 Qpct-201ENSMUST00000040789 1924 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Hcfc2Q9D968 Mgll-202ENSMUST00000113581 1308 ntTSL 5 BASIC13.88□□□□□ -0.19
Hcfc2Q9D968 Unc119-201ENSMUST00000002127 1329 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Hcfc2Q9D968 Appl2-201ENSMUST00000020500 3020 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Hcfc2Q9D968 Shank1-203ENSMUST00000107938 9826 ntAPPRIS P2 TSL 5 BASIC13.87□□□□□ -0.19
Hcfc2Q9D968 Matn4-202ENSMUST00000103104 2243 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Hcfc2Q9D968 Pdxdc1-202ENSMUST00000115802 2466 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Hcfc2Q9D968 Agfg2-202ENSMUST00000100544 2858 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Hcfc2Q9D968 Ptprd-206ENSMUST00000107289 9899 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
Hcfc2Q9D968 Dlgap1-206ENSMUST00000133717 2355 ntAPPRIS ALT2 TSL 5 BASIC13.87□□□□□ -0.19
Hcfc2Q9D968 Psmd3-201ENSMUST00000017365 2148 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Hcfc2Q9D968 Espn-203ENSMUST00000070018 1618 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Hcfc2Q9D968 Abl1-202ENSMUST00000075759 6327 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Hcfc2Q9D968 Slc30a2-203ENSMUST00000105873 1224 ntTSL 5 BASIC13.87□□□□□ -0.19
Hcfc2Q9D968 Prodh-206ENSMUST00000139861 677 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Hcfc2Q9D968 Dctn3-203ENSMUST00000171641 885 ntTSL 3 BASIC13.87□□□□□ -0.19
Hcfc2Q9D968 4930539J05Rik-202ENSMUST00000182865 511 ntTSL 2 BASIC13.87□□□□□ -0.19
Hcfc2Q9D968 AC164424.2-201ENSMUST00000223281 725 ntTSL 3 BASIC13.87□□□□□ -0.19
Hcfc2Q9D968 Golgb1-201ENSMUST00000023534 498 ntBASIC13.87□□□□□ -0.19
Hcfc2Q9D968 St8sia1-201ENSMUST00000032421 8991 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Hcfc2Q9D968 Fez2-201ENSMUST00000070039 1939 ntAPPRIS P3 TSL 1 (best) BASIC13.87□□□□□ -0.19
Hcfc2Q9D968 Ank1-203ENSMUST00000110688 7206 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Hcfc2Q9D968 Csnk1a1-206ENSMUST00000165721 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Hcfc2Q9D968 Actl6b-205ENSMUST00000139395 1592 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Hcfc2Q9D968 A930017K11Rik-201ENSMUST00000162431 2539 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Hcfc2Q9D968 Nfib-204ENSMUST00000107246 3075 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Hcfc2Q9D968 Fam131a-202ENSMUST00000118919 2262 ntTSL 5 BASIC13.87□□□□□ -0.19
Hcfc2Q9D968 Actl6a-201ENSMUST00000029214 2010 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Hcfc2Q9D968 Misp-205ENSMUST00000219305 2569 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Hcfc2Q9D968 Ppp1r9b-201ENSMUST00000038696 4508 ntAPPRIS P2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Hcfc2Q9D968 Mdfi-201ENSMUST00000035375 1371 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Hcfc2Q9D968 Ric1-201ENSMUST00000043610 7190 ntAPPRIS P1 TSL 5 BASIC13.86□□□□□ -0.19
Hcfc2Q9D968 Rad1-201ENSMUST00000022856 1514 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Hcfc2Q9D968 Prdm6-203ENSMUST00000115399 2227 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Hcfc2Q9D968 Hhat-203ENSMUST00000128619 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Hcfc2Q9D968 Cldn23-201ENSMUST00000060128 1848 ntAPPRIS P1 BASIC13.86□□□□□ -0.19
Hcfc2Q9D968 Pnkd-204ENSMUST00000113805 740 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Hcfc2Q9D968 AC093043.1-201ENSMUST00000226700 898 ntBASIC13.86□□□□□ -0.19
Hcfc2Q9D968 Rce1-201ENSMUST00000025823 1402 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Hcfc2Q9D968 Gm28523-201ENSMUST00000190040 1588 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Hcfc2Q9D968 Rnf38-203ENSMUST00000102934 5240 ntAPPRIS P1 TSL 5 BASIC13.86□□□□□ -0.19
Hcfc2Q9D968 9330160F10Rik-201ENSMUST00000101007 2766 ntBASIC13.86□□□□□ -0.19
Hcfc2Q9D968 Ikbip-202ENSMUST00000020150 1328 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
Hcfc2Q9D968 Bmt2-201ENSMUST00000045235 4143 ntAPPRIS P2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Hcfc2Q9D968 Htra3-202ENSMUST00000114233 1901 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Hcfc2Q9D968 Gm7292-201ENSMUST00000194706 2527 ntBASIC13.86□□□□□ -0.19
Hcfc2Q9D968 Bean1-203ENSMUST00000167633 3275 ntAPPRIS ALT2 TSL 5 BASIC13.86□□□□□ -0.19
Hcfc2Q9D968 Pard3-226ENSMUST00000162907 4682 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Hcfc2Q9D968 Epn1-207ENSMUST00000208634 2127 ntAPPRIS ALT2 TSL 5 BASIC13.85□□□□□ -0.19
Hcfc2Q9D968 Hpca-204ENSMUST00000116444 1847 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
Hcfc2Q9D968 Alg1-201ENSMUST00000049207 1669 ntAPPRIS ALT2 TSL 2 BASIC13.85□□□□□ -0.19
Hcfc2Q9D968 Icam5-201ENSMUST00000019616 2947 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Hcfc2Q9D968 Uso1-204ENSMUST00000202155 3707 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Hcfc2Q9D968 Gm26558-201ENSMUST00000180559 861 ntAPPRIS P1 BASIC13.85□□□□□ -0.19
Hcfc2Q9D968 Gm9207-201ENSMUST00000198773 1115 ntBASIC13.85□□□□□ -0.19
Hcfc2Q9D968 Rfxap-204ENSMUST00000217267 696 ntAPPRIS P2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Hcfc2Q9D968 Acss2-202ENSMUST00000065973 2876 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Hcfc2Q9D968 Sorcs3-201ENSMUST00000078880 5634 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Hcfc2Q9D968 Eid2b-201ENSMUST00000094651 1751 ntAPPRIS P1 BASIC13.85□□□□□ -0.19
Hcfc2Q9D968 Zmiz1-201ENSMUST00000007961 5397 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Hcfc2Q9D968 Ttc6-203ENSMUST00000172939 5782 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
Hcfc2Q9D968 Vsig10l-204ENSMUST00000203769 2473 ntAPPRIS P2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Hcfc2Q9D968 Zcchc6-207ENSMUST00000225576 2499 ntBASIC13.85□□□□□ -0.19
Hcfc2Q9D968 Dkk4-201ENSMUST00000033936 1315 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Hcfc2Q9D968 Fuz-201ENSMUST00000071207 1698 ntAPPRIS P2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Hcfc2Q9D968 Bicdl1-203ENSMUST00000118576 1874 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Hcfc2Q9D968 Senp2-201ENSMUST00000023561 4499 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Hcfc2Q9D968 Foxp4-204ENSMUST00000113265 3999 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Hcfc2Q9D968 Smim15-205ENSMUST00000225972 2097 ntAPPRIS P1 BASIC13.84□□□□□ -0.19
Hcfc2Q9D968 Mroh5-201ENSMUST00000071419 2766 ntAPPRIS P2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Hcfc2Q9D968 Coq8b-202ENSMUST00000108378 2276 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Hcfc2Q9D968 Il4i1-202ENSMUST00000118125 2275 ntAPPRIS ALT2 TSL 2 BASIC13.84□□□□□ -0.19
Hcfc2Q9D968 Acsl3-205ENSMUST00000142704 2976 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Hcfc2Q9D968 Bicc1-203ENSMUST00000143791 5431 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Hcfc2Q9D968 Zic1-201ENSMUST00000034927 5606 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Hcfc2Q9D968 Ncoa5-201ENSMUST00000040381 3179 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Hcfc2Q9D968 Lysmd4-209ENSMUST00000208998 2110 ntAPPRIS P2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Hcfc2Q9D968 Nrxn1-217ENSMUST00000174337 3021 ntTSL 5 BASIC13.84□□□□□ -0.19
Hcfc2Q9D968 Coq10a-201ENSMUST00000043211 1421 ntAPPRIS P2 TSL 5 BASIC13.84□□□□□ -0.19
Retrieved 100 of 76,532 protein–RNA pairs in 18.5 ms