Protein–RNA interactions for Protein: Q9D3E6

Stag1, Cohesin subunit SA-1, mousemouse

Predictions only

Length 1,258 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Stag1Q9D3E6 Fam98b-201ENSMUST00000028825 1861 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Stag1Q9D3E6 Gm15853-202ENSMUST00000195518 2041 ntBASIC21.79■■□□□ 1.08
Stag1Q9D3E6 Lpin2-213ENSMUST00000156570 1586 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
Stag1Q9D3E6 Espn-211ENSMUST00000105657 1375 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
Stag1Q9D3E6 Cisd2-202ENSMUST00000120988 1363 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
Stag1Q9D3E6 Gm15565-201ENSMUST00000118890 427 ntBASIC21.78■■□□□ 1.08
Stag1Q9D3E6 Cox7a2l-202ENSMUST00000167741 1147 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
Stag1Q9D3E6 Gm38285-201ENSMUST00000192928 922 ntBASIC21.78■■□□□ 1.08
Stag1Q9D3E6 Gm16475-201ENSMUST00000207306 512 ntTSL 2 BASIC21.78■■□□□ 1.08
Stag1Q9D3E6 Cmc1-202ENSMUST00000215799 531 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
Stag1Q9D3E6 4930554C24Rik-202ENSMUST00000216019 1159 ntTSL 5 BASIC21.78■■□□□ 1.08
Stag1Q9D3E6 Pomc-204ENSMUST00000219543 1043 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Stag1Q9D3E6 Crabp1-201ENSMUST00000034830 802 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Stag1Q9D3E6 Snapc3-202ENSMUST00000071544 942 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
Stag1Q9D3E6 Hnrnpl-211ENSMUST00000174548 2679 ntAPPRIS P1 TSL 5 BASIC21.78■■□□□ 1.08
Stag1Q9D3E6 Arrb2-204ENSMUST00000102564 1848 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Stag1Q9D3E6 Foxp1-220ENSMUST00000176565 3727 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
Stag1Q9D3E6 Lemd3-201ENSMUST00000119093 4370 ntAPPRIS ALT2 TSL 2 BASIC21.78■■□□□ 1.08
Stag1Q9D3E6 Gm5784-201ENSMUST00000179344 2478 ntBASIC21.78■■□□□ 1.08
Stag1Q9D3E6 Tpra1-223ENSMUST00000204765 1738 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Stag1Q9D3E6 Ndfip2-206ENSMUST00000181969 2532 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Stag1Q9D3E6 Anks1b-225ENSMUST00000182966 1625 ntTSL 5 BASIC21.77■■□□□ 1.08
Stag1Q9D3E6 Rcc1-202ENSMUST00000084250 2285 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Stag1Q9D3E6 D330020A13Rik-201ENSMUST00000181956 1069 ntAPPRIS P1 BASIC21.77■■□□□ 1.08
Stag1Q9D3E6 Gm37805-201ENSMUST00000192612 1094 ntBASIC21.77■■□□□ 1.08
Stag1Q9D3E6 Gm19610-201ENSMUST00000202894 408 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
Stag1Q9D3E6 Gm45337-201ENSMUST00000210537 1267 ntAPPRIS P1 BASIC21.77■■□□□ 1.08
Stag1Q9D3E6 Espn-202ENSMUST00000049305 1142 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
Stag1Q9D3E6 Rex1bd-201ENSMUST00000075175 671 ntAPPRIS P2 TSL 1 (best) BASIC21.77■■□□□ 1.08
Stag1Q9D3E6 Chmp7-201ENSMUST00000036381 2649 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Stag1Q9D3E6 Tbc1d25-201ENSMUST00000039892 2648 ntAPPRIS P3 TSL 1 (best) BASIC21.77■■□□□ 1.08
Stag1Q9D3E6 Krt4-201ENSMUST00000023797 2132 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Stag1Q9D3E6 Zdhhc13-201ENSMUST00000118927 2410 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Stag1Q9D3E6 Lrrc43-203ENSMUST00000196809 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC21.77■■□□□ 1.07
Stag1Q9D3E6 Gramd1a-201ENSMUST00000001280 2713 ntAPPRIS P2 TSL 1 (best) BASIC21.77■■□□□ 1.07
Stag1Q9D3E6 B3gnt9-201ENSMUST00000093217 2325 ntAPPRIS P1 TSL 2 BASIC21.77■■□□□ 1.07
Stag1Q9D3E6 Phf23-204ENSMUST00000133485 1607 ntTSL 5 BASIC21.77■■□□□ 1.07
Stag1Q9D3E6 Cd83-201ENSMUST00000015540 2477 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.07
Stag1Q9D3E6 Chst7-201ENSMUST00000044138 2206 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Stag1Q9D3E6 Dtnb-225ENSMUST00000174663 2381 ntAPPRIS ALT2 TSL 5 BASIC21.76■■□□□ 1.07
Stag1Q9D3E6 Neurl4-213ENSMUST00000177476 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC21.76■■□□□ 1.07
Stag1Q9D3E6 Nanp-201ENSMUST00000066640 1394 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Stag1Q9D3E6 Nsg1-204ENSMUST00000201363 820 ntAPPRIS P1 TSL 2 BASIC21.76■■□□□ 1.07
Stag1Q9D3E6 Thap3-201ENSMUST00000036680 1124 ntAPPRIS P3 TSL 1 (best) BASIC21.76■■□□□ 1.07
Stag1Q9D3E6 Irak1bp1-202ENSMUST00000113245 2158 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Stag1Q9D3E6 Tymp-201ENSMUST00000023285 2037 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Stag1Q9D3E6 Guca1b-202ENSMUST00000145462 1556 ntTSL 2 BASIC21.75■■□□□ 1.07
Stag1Q9D3E6 Snx4-201ENSMUST00000023502 2442 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Stag1Q9D3E6 Pou2f2-206ENSMUST00000108418 1934 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
Stag1Q9D3E6 Zpbp2-205ENSMUST00000107513 1240 ntAPPRIS ALT2 TSL 5 BASIC21.75■■□□□ 1.07
Stag1Q9D3E6 Atp5g1-203ENSMUST00000107686 691 ntAPPRIS P1 TSL 3 BASIC21.75■■□□□ 1.07
Stag1Q9D3E6 Gm13836-201ENSMUST00000121159 501 ntBASIC21.75■■□□□ 1.07
Stag1Q9D3E6 AC135963.1-201ENSMUST00000211640 717 ntBASIC21.75■■□□□ 1.07
Stag1Q9D3E6 1700020N01Rik-201ENSMUST00000057341 1062 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Stag1Q9D3E6 Nr1h3-204ENSMUST00000111356 1955 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Stag1Q9D3E6 Src-203ENSMUST00000109529 2020 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
Stag1Q9D3E6 Tesmin-201ENSMUST00000025840 2234 ntAPPRIS P3 TSL 1 (best) BASIC21.75■■□□□ 1.07
Stag1Q9D3E6 Dpf1-202ENSMUST00000065181 1574 ntAPPRIS ALT1 TSL 5 BASIC21.74■■□□□ 1.07
Stag1Q9D3E6 Mylip-201ENSMUST00000038275 3065 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Stag1Q9D3E6 Pqlc1-207ENSMUST00000140594 2356 ntAPPRIS P3 TSL 1 (best) BASIC21.74■■□□□ 1.07
Stag1Q9D3E6 Gm11747-201ENSMUST00000142751 1648 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
Stag1Q9D3E6 Gm9885-202ENSMUST00000186234 2209 ntBASIC21.74■■□□□ 1.07
Stag1Q9D3E6 Gm12979-201ENSMUST00000145488 405 ntTSL 2 BASIC21.74■■□□□ 1.07
Stag1Q9D3E6 Mir5122-201ENSMUST00000175004 89 ntBASIC21.74■■□□□ 1.07
Stag1Q9D3E6 Cldn14-205ENSMUST00000177648 1266 ntAPPRIS P1 TSL 2 BASIC21.74■■□□□ 1.07
Stag1Q9D3E6 Smim22-201ENSMUST00000178155 429 ntAPPRIS P3 TSL 1 (best) BASIC21.74■■□□□ 1.07
Stag1Q9D3E6 Gm7977-201ENSMUST00000193787 748 ntBASIC21.74■■□□□ 1.07
Stag1Q9D3E6 Gm43183-201ENSMUST00000200632 547 ntBASIC21.74■■□□□ 1.07
Stag1Q9D3E6 Ppp2r1b-209ENSMUST00000176349 1890 ntAPPRIS ALT2 TSL 5 BASIC21.74■■□□□ 1.07
Stag1Q9D3E6 Pon1-201ENSMUST00000002663 1513 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Stag1Q9D3E6 Dact2-201ENSMUST00000053218 2808 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Stag1Q9D3E6 Lrrc36-202ENSMUST00000109355 2411 ntAPPRIS P2 TSL 5 BASIC21.74■■□□□ 1.07
Stag1Q9D3E6 Whamm-201ENSMUST00000165460 3069 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Stag1Q9D3E6 Otud1-201ENSMUST00000052168 2832 ntAPPRIS P1 BASIC21.73■■□□□ 1.07
Stag1Q9D3E6 B3gat2-202ENSMUST00000140583 1737 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
Stag1Q9D3E6 6030445D17Rik-201ENSMUST00000084593 1728 ntAPPRIS P1 BASIC21.73■■□□□ 1.07
Stag1Q9D3E6 Gm15375-201ENSMUST00000119510 849 ntBASIC21.73■■□□□ 1.07
Stag1Q9D3E6 Gm16192-201ENSMUST00000148357 937 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
Stag1Q9D3E6 Gm26879-201ENSMUST00000181127 1176 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
Stag1Q9D3E6 Cpne1-217ENSMUST00000184265 871 ntTSL 5 BASIC21.73■■□□□ 1.07
Stag1Q9D3E6 AC175538.1-201ENSMUST00000225343 1269 ntBASIC21.73■■□□□ 1.07
Stag1Q9D3E6 Trim33-202ENSMUST00000106860 5025 ntAPPRIS ALT2 TSL 1 (best) BASIC21.73■■□□□ 1.07
Stag1Q9D3E6 Spock1-201ENSMUST00000172326 1320 ntAPPRIS P3 TSL 5 BASIC21.73■■□□□ 1.07
Stag1Q9D3E6 Lsp1-204ENSMUST00000105967 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC21.73■■□□□ 1.07
Stag1Q9D3E6 Grina-201ENSMUST00000023225 1693 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Stag1Q9D3E6 Rbmxl1-201ENSMUST00000049245 1695 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Stag1Q9D3E6 Ascl1-201ENSMUST00000020243 2481 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Stag1Q9D3E6 B430219N15Rik-201ENSMUST00000147230 835 ntTSL 2 BASIC21.72■■□□□ 1.07
Stag1Q9D3E6 B230208B08Rik-201ENSMUST00000173049 404 ntTSL 3 BASIC21.72■■□□□ 1.07
Stag1Q9D3E6 Tlx1os-201ENSMUST00000173437 620 ntTSL 3 BASIC21.72■■□□□ 1.07
Stag1Q9D3E6 Gm20403-201ENSMUST00000173803 372 ntAPPRIS P1 BASIC21.72■■□□□ 1.07
Stag1Q9D3E6 Gm29994-201ENSMUST00000195495 1193 ntBASIC21.72■■□□□ 1.07
Stag1Q9D3E6 Atp23-201ENSMUST00000026504 903 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
Stag1Q9D3E6 1700008J07Rik-201ENSMUST00000185351 2432 ntBASIC21.72■■□□□ 1.07
Stag1Q9D3E6 Aldh7a1-206ENSMUST00000172734 1880 ntTSL 5 BASIC21.72■■□□□ 1.07
Stag1Q9D3E6 Snx15-201ENSMUST00000025702 1635 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Stag1Q9D3E6 Xkr6-201ENSMUST00000119973 2963 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Stag1Q9D3E6 Sybu-208ENSMUST00000228057 3026 ntAPPRIS ALT2 BASIC21.72■■□□□ 1.07
Stag1Q9D3E6 Nudt10-201ENSMUST00000103006 1775 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Stag1Q9D3E6 Gm45560-201ENSMUST00000211492 1472 ntBASIC21.71■■□□□ 1.07
Retrieved 100 of 76,532 protein–RNA pairs in 41.2 ms