Protein–RNA interactions for Protein: Q9D132

Upk1a, Uroplakin-1a, mousemouse

Predictions only

Length 257 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upk1aQ9D132 AC122379.1-201ENSMUST00000220658 355 ntTSL 3 BASIC17.33■□□□□ 0.36
Upk1aQ9D132 Frmd5-203ENSMUST00000121219 2262 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Upk1aQ9D132 Gm43338-201ENSMUST00000198617 2223 ntBASIC17.33■□□□□ 0.36
Upk1aQ9D132 Bean1-203ENSMUST00000167633 3275 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.36
Upk1aQ9D132 Cyr61-201ENSMUST00000029846 2019 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Upk1aQ9D132 Cep68-204ENSMUST00000162811 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
Upk1aQ9D132 Bmpr1a-201ENSMUST00000049005 5956 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Upk1aQ9D132 Cnn2-201ENSMUST00000004784 2460 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Upk1aQ9D132 Art5-201ENSMUST00000094128 1518 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
Upk1aQ9D132 Acadvl-201ENSMUST00000018718 2020 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
Upk1aQ9D132 Pitx2-207ENSMUST00000174661 1942 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
Upk1aQ9D132 Gm11713-201ENSMUST00000139941 523 ntTSL 3 BASIC17.32■□□□□ 0.36
Upk1aQ9D132 Gm16076-201ENSMUST00000140116 480 ntTSL 3 BASIC17.32■□□□□ 0.36
Upk1aQ9D132 Plac9b-203ENSMUST00000184142 1040 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Upk1aQ9D132 Gm19094-201ENSMUST00000209791 1246 ntBASIC17.32■□□□□ 0.36
Upk1aQ9D132 Myb-201ENSMUST00000020158 3074 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
Upk1aQ9D132 Slc2a8-201ENSMUST00000028129 2108 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Upk1aQ9D132 Proser2-201ENSMUST00000054254 2061 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Upk1aQ9D132 4921536K21Rik-201ENSMUST00000020712 2590 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Upk1aQ9D132 Yipf3-201ENSMUST00000095263 2035 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Upk1aQ9D132 Sh3bp1-201ENSMUST00000001226 2510 ntTSL 5 BASIC17.31■□□□□ 0.36
Upk1aQ9D132 BC051019-202ENSMUST00000106735 1957 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Upk1aQ9D132 Slc25a26-201ENSMUST00000061118 1922 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Upk1aQ9D132 Pgm3-202ENSMUST00000072585 1920 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Upk1aQ9D132 Gm8309-201ENSMUST00000206627 1448 ntBASIC17.31■□□□□ 0.36
Upk1aQ9D132 Mpped2-202ENSMUST00000111063 2848 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Upk1aQ9D132 Uri1-201ENSMUST00000085513 3441 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Upk1aQ9D132 Nkain1-201ENSMUST00000105993 1202 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Upk1aQ9D132 Cdh4-203ENSMUST00000108911 1208 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Upk1aQ9D132 Pkig-204ENSMUST00000126182 762 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
Upk1aQ9D132 Ppp1cb-206ENSMUST00000202078 383 ntTSL 5 BASIC17.31■□□□□ 0.36
Upk1aQ9D132 Ttyh3-201ENSMUST00000042661 4658 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Upk1aQ9D132 Fam58b-201ENSMUST00000059468 1224 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
Upk1aQ9D132 4930426D05Rik-202ENSMUST00000139804 1650 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Upk1aQ9D132 Akp3-201ENSMUST00000044878 1680 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Upk1aQ9D132 Podxl-201ENSMUST00000026698 5379 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Upk1aQ9D132 Fxr1-201ENSMUST00000001620 2459 ntTSL 5 BASIC17.31■□□□□ 0.36
Upk1aQ9D132 Axin1-203ENSMUST00000163421 2890 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
Upk1aQ9D132 Hhipl1-201ENSMUST00000021685 5174 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Upk1aQ9D132 Trap1-201ENSMUST00000006137 2320 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Upk1aQ9D132 Nespas-203ENSMUST00000151472 2248 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Upk1aQ9D132 Egln2-202ENSMUST00000108382 1756 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
Upk1aQ9D132 Fam171a2-201ENSMUST00000049057 3118 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Upk1aQ9D132 Bmp8a-201ENSMUST00000040496 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Upk1aQ9D132 Pdap1-201ENSMUST00000031627 2353 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Upk1aQ9D132 Btbd6-202ENSMUST00000165079 1975 ntAPPRIS ALT2 TSL 3 BASIC17.3■□□□□ 0.36
Upk1aQ9D132 Shq1-204ENSMUST00000170667 1990 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Upk1aQ9D132 Slc12a2-201ENSMUST00000115366 6520 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Upk1aQ9D132 Eps8-203ENSMUST00000111878 3560 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Upk1aQ9D132 Sgsm1-204ENSMUST00000112325 2274 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Upk1aQ9D132 Gm38534-201ENSMUST00000206566 1909 ntTSL 5 BASIC17.3■□□□□ 0.36
Upk1aQ9D132 Emc6-202ENSMUST00000108480 563 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
Upk1aQ9D132 Aktip-201ENSMUST00000109609 1171 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Upk1aQ9D132 Gm12821-201ENSMUST00000120022 600 ntBASIC17.3■□□□□ 0.36
Upk1aQ9D132 Cdk19os-202ENSMUST00000143103 1124 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Upk1aQ9D132 Gm44731-201ENSMUST00000203086 542 ntTSL 3 BASIC17.3■□□□□ 0.36
Upk1aQ9D132 Mcrip2-201ENSMUST00000026828 816 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Upk1aQ9D132 Pkig-202ENSMUST00000099105 640 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
Upk1aQ9D132 Lzts2-201ENSMUST00000039016 2825 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Upk1aQ9D132 Ap2m1-202ENSMUST00000090023 2080 ntAPPRIS ALT1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Upk1aQ9D132 Adap2-201ENSMUST00000021050 1785 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Upk1aQ9D132 Ncmap-205ENSMUST00000105860 2000 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Upk1aQ9D132 Amacr-201ENSMUST00000070877 2577 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Upk1aQ9D132 Gm21992-201ENSMUST00000172000 1434 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
Upk1aQ9D132 Gm21992-206ENSMUST00000179909 1435 ntTSL 5 BASIC17.3■□□□□ 0.36
Upk1aQ9D132 Mapkapk3-201ENSMUST00000035194 2816 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Upk1aQ9D132 Med9-201ENSMUST00000081980 1920 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Upk1aQ9D132 St7l-202ENSMUST00000106769 2428 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Upk1aQ9D132 Rcbtb2-226ENSMUST00000171767 2692 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Upk1aQ9D132 Gabpb1-203ENSMUST00000103226 1338 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Upk1aQ9D132 Akt1s1-203ENSMUST00000107882 1160 ntAPPRIS ALT2 TSL 3 BASIC17.29■□□□□ 0.36
Upk1aQ9D132 Gm26971-201ENSMUST00000182423 1072 ntBASIC17.29■□□□□ 0.36
Upk1aQ9D132 Erh-201ENSMUST00000021559 1293 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Upk1aQ9D132 Zbtb32-202ENSMUST00000108151 1775 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
Upk1aQ9D132 Fstl3-201ENSMUST00000020575 1955 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Upk1aQ9D132 Stx4a-201ENSMUST00000033075 1456 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Upk1aQ9D132 Gm16863-201ENSMUST00000181476 2431 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Upk1aQ9D132 Cacul1-203ENSMUST00000166712 5700 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
Upk1aQ9D132 Cacul1-202ENSMUST00000111460 5561 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Upk1aQ9D132 Hjurp-202ENSMUST00000065420 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Upk1aQ9D132 Eif5a-210ENSMUST00000108613 1343 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Upk1aQ9D132 Dnaaf5-203ENSMUST00000196441 2426 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Upk1aQ9D132 Foxj2-201ENSMUST00000003238 5283 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Upk1aQ9D132 1700065D16Rik-204ENSMUST00000189348 1540 ntTSL 2 BASIC17.28■□□□□ 0.36
Upk1aQ9D132 Tmem198-202ENSMUST00000113575 2185 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Upk1aQ9D132 6430573F11Rik-202ENSMUST00000135373 2573 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Upk1aQ9D132 Gm3164-201ENSMUST00000168866 1945 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
Upk1aQ9D132 Appbp2os-202ENSMUST00000206972 447 ntBASIC17.28■□□□□ 0.36
Upk1aQ9D132 Sema6d-204ENSMUST00000078621 6372 ntTSL 5 BASIC17.28■□□□□ 0.36
Upk1aQ9D132 Gm6139-201ENSMUST00000079261 882 ntBASIC17.28■□□□□ 0.36
Upk1aQ9D132 Fiz1-208ENSMUST00000208944 2306 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Upk1aQ9D132 Gm26646-201ENSMUST00000180715 1490 ntTSL 5 BASIC17.28■□□□□ 0.36
Upk1aQ9D132 Sox12-201ENSMUST00000063332 4169 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
Upk1aQ9D132 Nt5c3b-204ENSMUST00000107398 1635 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Upk1aQ9D132 Ncoa5-201ENSMUST00000040381 3179 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Upk1aQ9D132 Hmbox1-203ENSMUST00000175744 1771 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Upk1aQ9D132 Krt80-201ENSMUST00000077196 1774 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Upk1aQ9D132 Eif5a-202ENSMUST00000070996 1373 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Upk1aQ9D132 Akt2-205ENSMUST00000108344 4544 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Upk1aQ9D132 Lhx2-203ENSMUST00000143783 1696 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 59.1 ms