Protein–RNA interactions for Protein: Q9D071

Mms19, MMS19 nucleotide excision repair protein homolog, mousemouse

Predictions only

Length 1,031 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mms19Q9D071 Chpt1-202ENSMUST00000073783 852 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
Mms19Q9D071 1700028I16Rik-201ENSMUST00000076984 1048 ntTSL 5 BASIC19.52■□□□□ 0.72
Mms19Q9D071 Kcng3-201ENSMUST00000051482 3356 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Mms19Q9D071 Rab5a-201ENSMUST00000017975 2357 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Mms19Q9D071 Kcnd3-202ENSMUST00000098761 7169 ntAPPRIS ALT1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Mms19Q9D071 Leng1-201ENSMUST00000019878 2222 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
Mms19Q9D071 Fbxo17-201ENSMUST00000032818 1958 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
Mms19Q9D071 Esco1-202ENSMUST00000097670 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.71
Mms19Q9D071 Klc1-204ENSMUST00000122300 2268 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Mms19Q9D071 Dbr1-201ENSMUST00000066650 2261 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Mms19Q9D071 Galk1-201ENSMUST00000021114 1406 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Mms19Q9D071 Arid1a-202ENSMUST00000105897 8175 ntAPPRIS P2 TSL 5 BASIC19.51■□□□□ 0.71
Mms19Q9D071 Cct4-201ENSMUST00000020562 1634 ntTSL 5 BASIC19.51■□□□□ 0.71
Mms19Q9D071 Gls-204ENSMUST00000114513 4966 ntAPPRIS P3 TSL 5 BASIC19.51■□□□□ 0.71
Mms19Q9D071 Arrb2-202ENSMUST00000084954 1732 ntTSL 5 BASIC19.51■□□□□ 0.71
Mms19Q9D071 Dhx36-201ENSMUST00000029336 5620 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Mms19Q9D071 Pdp1-206ENSMUST00000108302 2525 ntTSL 3 BASIC19.51■□□□□ 0.71
Mms19Q9D071 Fbxl5-204ENSMUST00000119523 2801 ntTSL 5 BASIC19.51■□□□□ 0.71
Mms19Q9D071 Itgb4-210ENSMUST00000169928 6160 ntAPPRIS P2 TSL 5 BASIC19.51■□□□□ 0.71
Mms19Q9D071 Gm15648-201ENSMUST00000149681 778 ntTSL 5 BASIC19.51■□□□□ 0.71
Mms19Q9D071 Sap30-201ENSMUST00000034022 1178 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Mms19Q9D071 Kcnk3-201ENSMUST00000066295 3811 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Mms19Q9D071 Hspe1-201ENSMUST00000075242 774 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Mms19Q9D071 Metrn-202ENSMUST00000165838 1363 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Mms19Q9D071 Pwwp2b-201ENSMUST00000093993 3057 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Mms19Q9D071 Hs3st5-202ENSMUST00000167191 2408 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Mms19Q9D071 Tymp-201ENSMUST00000023285 2037 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Mms19Q9D071 Spc25-202ENSMUST00000112320 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
Mms19Q9D071 Eif1-201ENSMUST00000049385 1322 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Mms19Q9D071 Stk11-201ENSMUST00000003152 2566 ntAPPRIS P3 TSL 1 (best) BASIC19.5■□□□□ 0.71
Mms19Q9D071 a-202ENSMUST00000109697 705 ntAPPRIS P1 TSL 5 BASIC19.5■□□□□ 0.71
Mms19Q9D071 Nudt8-203ENSMUST00000122924 1082 ntTSL 2 BASIC19.5■□□□□ 0.71
Mms19Q9D071 Gm16192-201ENSMUST00000148357 937 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Mms19Q9D071 Rabac1-203ENSMUST00000205871 986 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Mms19Q9D071 Fkbp11-201ENSMUST00000003445 731 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Mms19Q9D071 Zfp580-201ENSMUST00000069324 1096 ntAPPRIS P2 TSL 1 (best) BASIC19.5■□□□□ 0.71
Mms19Q9D071 Gm29430-202ENSMUST00000191453 2015 ntTSL 5 BASIC19.5■□□□□ 0.71
Mms19Q9D071 Klhl2-201ENSMUST00000034017 3412 ntAPPRIS P2 TSL 1 (best) BASIC19.5■□□□□ 0.71
Mms19Q9D071 Gm26689-201ENSMUST00000180927 1818 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Mms19Q9D071 Gm26553-201ENSMUST00000181531 1818 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Mms19Q9D071 6030445D17Rik-201ENSMUST00000084593 1728 ntAPPRIS P1 BASIC19.5■□□□□ 0.71
Mms19Q9D071 Trim44-201ENSMUST00000102573 5612 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Mms19Q9D071 Il15ra-201ENSMUST00000078834 1600 ntAPPRIS P3 TSL 5 BASIC19.5■□□□□ 0.71
Mms19Q9D071 Galnt1-206ENSMUST00000170243 4108 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Mms19Q9D071 Tmem80-206ENSMUST00000133012 1524 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Mms19Q9D071 Cebpa-201ENSMUST00000042985 2626 ntAPPRIS P1 BASIC19.5■□□□□ 0.71
Mms19Q9D071 Gm8309-201ENSMUST00000206627 1448 ntBASIC19.5■□□□□ 0.71
Mms19Q9D071 Cbln2-202ENSMUST00000122079 2549 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Mms19Q9D071 Abr-202ENSMUST00000072740 5394 ntAPPRIS P1 TSL 5 BASIC19.49■□□□□ 0.71
Mms19Q9D071 Rhbdf1-201ENSMUST00000020524 2946 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Mms19Q9D071 Golga5-202ENSMUST00000179218 2827 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Mms19Q9D071 Tsks-202ENSMUST00000120929 1843 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
Mms19Q9D071 Pitx3-201ENSMUST00000026259 1380 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Mms19Q9D071 Fbxl5-201ENSMUST00000047857 2858 ntAPPRIS P2 TSL 1 (best) BASIC19.49■□□□□ 0.71
Mms19Q9D071 Snrnp70-201ENSMUST00000074575 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Mms19Q9D071 Gm12527-201ENSMUST00000117967 564 ntBASIC19.49■□□□□ 0.71
Mms19Q9D071 Gm12473-201ENSMUST00000137535 579 ntTSL 5 BASIC19.49■□□□□ 0.71
Mms19Q9D071 Gm29458-201ENSMUST00000187093 354 ntTSL 3 BASIC19.49■□□□□ 0.71
Mms19Q9D071 Tspan2-203ENSMUST00000196611 682 ntTSL 5 BASIC19.49■□□□□ 0.71
Mms19Q9D071 Gm44672-201ENSMUST00000206944 1098 ntBASIC19.49■□□□□ 0.71
Mms19Q9D071 Prmt1-205ENSMUST00000207659 945 ntTSL 5 BASIC19.49■□□□□ 0.71
Mms19Q9D071 Prmt1-201ENSMUST00000045325 1071 ntTSL 5 BASIC19.49■□□□□ 0.71
Mms19Q9D071 Actrt3-201ENSMUST00000047630 1961 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Mms19Q9D071 Gas2-203ENSMUST00000107591 2232 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Mms19Q9D071 Porcn-202ENSMUST00000082320 1883 ntAPPRIS ALT1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Mms19Q9D071 Rap1b-201ENSMUST00000064667 2724 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Mms19Q9D071 AI314180-201ENSMUST00000055822 1478 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Mms19Q9D071 Gm43231-201ENSMUST00000202960 2258 ntBASIC19.48■□□□□ 0.71
Mms19Q9D071 Hmgn2-204ENSMUST00000105893 973 ntTSL 3 BASIC19.48■□□□□ 0.71
Mms19Q9D071 Gm16764-202ENSMUST00000148931 433 ntTSL 5 BASIC19.48■□□□□ 0.71
Mms19Q9D071 2610035F20Rik-202ENSMUST00000177306 1149 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Mms19Q9D071 Tmem54-201ENSMUST00000030575 1064 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Mms19Q9D071 Vgll2-201ENSMUST00000058347 966 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
Mms19Q9D071 Mchr1-201ENSMUST00000166855 2188 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Mms19Q9D071 Slc17a7-202ENSMUST00000209634 1860 ntTSL 5 BASIC19.48■□□□□ 0.71
Mms19Q9D071 Nin-203ENSMUST00000095666 7183 ntAPPRIS ALT2 TSL 5 BASIC19.47■□□□□ 0.71
Mms19Q9D071 Ptprf-201ENSMUST00000049074 7656 ntAPPRIS P1 TSL 5 BASIC19.47■□□□□ 0.71
Mms19Q9D071 Tex264-203ENSMUST00000169068 1364 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Mms19Q9D071 A130051J06Rik-201ENSMUST00000180649 2618 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Mms19Q9D071 Gm20049-201ENSMUST00000219950 730 ntBASIC19.47■□□□□ 0.71
Mms19Q9D071 Gm7075-201ENSMUST00000054760 425 ntAPPRIS P1 BASIC19.47■□□□□ 0.71
Mms19Q9D071 Olfr322-201ENSMUST00000072030 984 ntAPPRIS P1 BASIC19.47■□□□□ 0.71
Mms19Q9D071 Pusl1-201ENSMUST00000097737 1243 ntAPPRIS P1 TSL 5 BASIC19.47■□□□□ 0.71
Mms19Q9D071 Mycl-202ENSMUST00000106252 3293 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Mms19Q9D071 Ppp2r1b-209ENSMUST00000176349 1890 ntAPPRIS ALT2 TSL 5 BASIC19.47■□□□□ 0.71
Mms19Q9D071 Rpap3-201ENSMUST00000023104 2260 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Mms19Q9D071 Dpys-202ENSMUST00000110306 2110 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Mms19Q9D071 Speg-204ENSMUST00000113589 833 ntTSL 2 BASIC19.46■□□□□ 0.71
Mms19Q9D071 2310068J16Rik-201ENSMUST00000188271 1124 ntBASIC19.46■□□□□ 0.71
Mms19Q9D071 Lrrfip1-201ENSMUST00000068116 2050 ntAPPRIS ALT2 TSL 5 BASIC19.46■□□□□ 0.71
Mms19Q9D071 Kansl1l-201ENSMUST00000068168 4459 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Mms19Q9D071 Neil2-201ENSMUST00000038229 1932 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Mms19Q9D071 Mtmr1-201ENSMUST00000015358 4634 ntAPPRIS P2 TSL 1 (best) BASIC19.46■□□□□ 0.71
Mms19Q9D071 1810010K12Rik-201ENSMUST00000070378 1324 ntBASIC19.46■□□□□ 0.71
Mms19Q9D071 Paics-203ENSMUST00000120912 2345 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Mms19Q9D071 Agfg1-206ENSMUST00000189220 8044 ntAPPRIS P2 TSL 1 (best) BASIC19.46■□□□□ 0.71
Mms19Q9D071 Dpf1-203ENSMUST00000108230 1553 ntTSL 5 BASIC19.45■□□□□ 0.7
Mms19Q9D071 Mafg-201ENSMUST00000058162 4923 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Mms19Q9D071 Dhx15-201ENSMUST00000031061 3010 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Mms19Q9D071 Egln1-201ENSMUST00000034469 3594 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Retrieved 100 of 76,532 protein–RNA pairs in 21 ms