Protein–RNA interactions for Protein: Q9CWT6

Ddx28, Probable ATP-dependent RNA helicase DDX28, mousemouse

Known RBP Predictions only

Length 540 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx28Q9CWT6 0610038B21Rik-202ENSMUST00000184762 1524 ntBASIC17.06■□□□□ 0.32
Ddx28Q9CWT6 Ncoa5-201ENSMUST00000040381 3179 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Ddx28Q9CWT6 Htr6-202ENSMUST00000105802 2341 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
Ddx28Q9CWT6 Wdr37-203ENSMUST00000164183 1780 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Ddx28Q9CWT6 Gm43702-201ENSMUST00000198772 2546 ntBASIC17.05■□□□□ 0.32
Ddx28Q9CWT6 6030419C18Rik-201ENSMUST00000085658 2139 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Ddx28Q9CWT6 Pdcl3-201ENSMUST00000027247 3914 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Ddx28Q9CWT6 Gm26774-201ENSMUST00000181534 2401 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Ddx28Q9CWT6 Iqgap2-201ENSMUST00000068603 5771 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Ddx28Q9CWT6 Zbtb9-201ENSMUST00000120016 2798 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Ddx28Q9CWT6 Gm6627-201ENSMUST00000218299 2386 ntBASIC17.05■□□□□ 0.32
Ddx28Q9CWT6 Anapc1-202ENSMUST00000110332 1214 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Ddx28Q9CWT6 Gm43060-201ENSMUST00000200621 289 ntBASIC17.05■□□□□ 0.32
Ddx28Q9CWT6 Gm2011-201ENSMUST00000203124 1263 ntBASIC17.05■□□□□ 0.32
Ddx28Q9CWT6 Osbpl1a-207ENSMUST00000121808 3030 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Ddx28Q9CWT6 Ttc13-201ENSMUST00000041614 3038 ntTSL 2 BASIC17.05■□□□□ 0.32
Ddx28Q9CWT6 C2cd4c-202ENSMUST00000178228 2761 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Ddx28Q9CWT6 Tcp11-203ENSMUST00000114836 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Ddx28Q9CWT6 Por-201ENSMUST00000005651 2636 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Ddx28Q9CWT6 Synpo-201ENSMUST00000097566 5060 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
Ddx28Q9CWT6 Slc39a5-201ENSMUST00000042666 1947 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Ddx28Q9CWT6 Gm7860-201ENSMUST00000121190 879 ntBASIC17.04■□□□□ 0.32
Ddx28Q9CWT6 Gm14281-201ENSMUST00000121700 1294 ntBASIC17.04■□□□□ 0.32
Ddx28Q9CWT6 Gm12063-201ENSMUST00000148087 715 ntTSL 2 BASIC17.04■□□□□ 0.32
Ddx28Q9CWT6 Hes3-202ENSMUST00000218045 962 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
Ddx28Q9CWT6 1700012B09Rik-201ENSMUST00000060330 688 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Ddx28Q9CWT6 Chd3os-201ENSMUST00000129321 2081 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Ddx28Q9CWT6 Cul4a-201ENSMUST00000016680 3728 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Ddx28Q9CWT6 Grtp1-207ENSMUST00000211128 1416 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Ddx28Q9CWT6 Cdc14b-203ENSMUST00000109770 3052 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
Ddx28Q9CWT6 Cox18-202ENSMUST00000118816 1307 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Ddx28Q9CWT6 Sox30-201ENSMUST00000049038 2997 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Ddx28Q9CWT6 Tmem147-201ENSMUST00000006478 870 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Ddx28Q9CWT6 Coq10b-201ENSMUST00000027125 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Ddx28Q9CWT6 Fignl2-201ENSMUST00000178140 4206 ntAPPRIS P1 BASIC17.03■□□□□ 0.32
Ddx28Q9CWT6 Mink1-205ENSMUST00000102559 4865 ntAPPRIS P4 TSL 1 (best) BASIC17.03■□□□□ 0.32
Ddx28Q9CWT6 Gm16201-202ENSMUST00000139218 2330 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Ddx28Q9CWT6 Clip2-202ENSMUST00000100647 4994 ntAPPRIS P4 TSL 1 (best) BASIC17.03■□□□□ 0.32
Ddx28Q9CWT6 Blcap-202ENSMUST00000109528 2056 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Ddx28Q9CWT6 Dyrk1b-203ENSMUST00000172761 2018 ntAPPRIS ALT1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Ddx28Q9CWT6 Ddx59-201ENSMUST00000027655 2166 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Ddx28Q9CWT6 Dach1-201ENSMUST00000069334 5063 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
Ddx28Q9CWT6 Prodh-201ENSMUST00000003620 2385 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.32
Ddx28Q9CWT6 1700018L02Rik-201ENSMUST00000187897 2485 ntBASIC17.02■□□□□ 0.32
Ddx28Q9CWT6 Ccdc88a-201ENSMUST00000040182 9376 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.32
Ddx28Q9CWT6 Fmnl3-202ENSMUST00000088233 4423 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.32
Ddx28Q9CWT6 Gm15270-201ENSMUST00000125158 870 ntTSL 3 BASIC17.02■□□□□ 0.32
Ddx28Q9CWT6 Gm11650-201ENSMUST00000141271 1145 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Ddx28Q9CWT6 Wdr4-203ENSMUST00000167419 813 ntTSL 3 BASIC17.02■□□□□ 0.32
Ddx28Q9CWT6 Selenos-205ENSMUST00000206575 1157 ntAPPRIS ALT1 TSL 2 BASIC17.02■□□□□ 0.32
Ddx28Q9CWT6 Kat14-201ENSMUST00000028911 3801 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Ddx28Q9CWT6 Hoxc12-201ENSMUST00000055562 1031 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Ddx28Q9CWT6 Krt24-201ENSMUST00000017255 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Ddx28Q9CWT6 Cdca7l-201ENSMUST00000021592 2957 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Ddx28Q9CWT6 Ppme1-201ENSMUST00000032963 2772 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Ddx28Q9CWT6 Crocc-203ENSMUST00000102491 6582 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Ddx28Q9CWT6 Taok3-203ENSMUST00000111978 4467 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Ddx28Q9CWT6 Krt73-201ENSMUST00000063292 2165 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Ddx28Q9CWT6 Ptprd-206ENSMUST00000107289 9899 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.31
Ddx28Q9CWT6 Trim44-201ENSMUST00000102573 5612 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Ddx28Q9CWT6 Pxk-202ENSMUST00000112689 2840 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
Ddx28Q9CWT6 Zbtb24-201ENSMUST00000080771 2844 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Ddx28Q9CWT6 Camk2d-228ENSMUST00000200171 5396 ntTSL 5 BASIC17.02■□□□□ 0.31
Ddx28Q9CWT6 Sae1-204ENSMUST00000211741 1663 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Ddx28Q9CWT6 Lcorl-202ENSMUST00000045586 5708 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Ddx28Q9CWT6 Zrsr2-202ENSMUST00000112289 2735 ntAPPRIS P1 TSL 2 BASIC17.01■□□□□ 0.31
Ddx28Q9CWT6 Map3k5-201ENSMUST00000095806 5450 ntAPPRIS P2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Ddx28Q9CWT6 Srsf11-202ENSMUST00000072875 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Ddx28Q9CWT6 Espn-205ENSMUST00000084114 1645 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Ddx28Q9CWT6 Morf4l1-211ENSMUST00000191189 1223 ntTSL 5 BASIC17.01■□□□□ 0.31
Ddx28Q9CWT6 Bax-205ENSMUST00000211365 801 ntTSL 3 BASIC17.01■□□□□ 0.31
Ddx28Q9CWT6 Ap4s1-201ENSMUST00000021338 1035 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Ddx28Q9CWT6 Nabp2-201ENSMUST00000026439 1130 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Ddx28Q9CWT6 Fdx1-201ENSMUST00000034552 875 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Ddx28Q9CWT6 Lbx2-201ENSMUST00000041265 817 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Ddx28Q9CWT6 Dtd2-202ENSMUST00000085404 1012 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Ddx28Q9CWT6 Otud7a-201ENSMUST00000058476 3483 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Ddx28Q9CWT6 Prkg2-201ENSMUST00000031277 2618 ntTSL 5 BASIC17.01■□□□□ 0.31
Ddx28Q9CWT6 Zfp865-203ENSMUST00000085427 2751 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Ddx28Q9CWT6 Eps8-201ENSMUST00000058210 4567 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Ddx28Q9CWT6 Mtg1-201ENSMUST00000036977 1595 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Ddx28Q9CWT6 Fam49b-207ENSMUST00000228226 1896 ntAPPRIS P1 BASIC17.01■□□□□ 0.31
Ddx28Q9CWT6 Kbtbd13-201ENSMUST00000068307 2969 ntAPPRIS P1 BASIC17.01■□□□□ 0.31
Ddx28Q9CWT6 Arhgap8-207ENSMUST00000172307 1544 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
Ddx28Q9CWT6 Galnt14-202ENSMUST00000112591 1843 ntTSL 1 (best) BASIC17■□□□□ 0.31
Ddx28Q9CWT6 Fam149b-204ENSMUST00000090503 2053 ntTSL 1 (best) BASIC17■□□□□ 0.31
Ddx28Q9CWT6 Cacfd1-202ENSMUST00000114004 2194 ntTSL 1 (best) BASIC17■□□□□ 0.31
Ddx28Q9CWT6 Paip2-205ENSMUST00000115737 713 ntAPPRIS P1 TSL 3 BASIC17■□□□□ 0.31
Ddx28Q9CWT6 Snhg20-202ENSMUST00000149822 593 ntTSL 1 (best) BASIC17■□□□□ 0.31
Ddx28Q9CWT6 Rab6b-202ENSMUST00000189134 716 ntTSL 3 BASIC17■□□□□ 0.31
Ddx28Q9CWT6 Prmt1-210ENSMUST00000208829 621 ntTSL 5 BASIC17■□□□□ 0.31
Ddx28Q9CWT6 0610010K14Rik-202ENSMUST00000021181 779 ntTSL 1 (best) BASIC17■□□□□ 0.31
Ddx28Q9CWT6 Slc22a3-201ENSMUST00000024595 3501 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Ddx28Q9CWT6 Pip5k1c-202ENSMUST00000105327 2551 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
Ddx28Q9CWT6 Sri-205ENSMUST00000148633 2251 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Ddx28Q9CWT6 AB041806-201ENSMUST00000062902 2105 ntTSL 1 (best) BASIC17■□□□□ 0.31
Ddx28Q9CWT6 Ube2d-ps-204ENSMUST00000137510 1846 ntTSL 1 (best) BASIC17■□□□□ 0.31
Ddx28Q9CWT6 Rad1-201ENSMUST00000022856 1514 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Ddx28Q9CWT6 Mark3-202ENSMUST00000084953 3365 ntTSL 1 (best) BASIC17■□□□□ 0.31
Ddx28Q9CWT6 Ppp2r1b-206ENSMUST00000175645 1931 ntAPPRIS ALT2 TSL 5 BASIC17■□□□□ 0.31
Retrieved 100 of 76,532 protein–RNA pairs in 29.6 ms