Protein–RNA interactions for Protein: Q9CR29

Ccdc43, Coiled-coil domain-containing protein 43, mousemouse

Known RBP Predictions only

Length 222 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc43Q9CR29 Ypel3-201ENSMUST00000038614 973 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Ccdc43Q9CR29 Arid3c-204ENSMUST00000171251 1751 ntAPPRIS P3 TSL 5 BASIC20.3■□□□□ 0.84
Ccdc43Q9CR29 Atp8b1-201ENSMUST00000025482 6440 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Ccdc43Q9CR29 Ltbp4-202ENSMUST00000108369 5377 ntAPPRIS ALT2 TSL 5 BASIC20.3■□□□□ 0.84
Ccdc43Q9CR29 Irx5-201ENSMUST00000034184 2450 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Ccdc43Q9CR29 Adnp-202ENSMUST00000088001 4932 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Ccdc43Q9CR29 Cxxc1-201ENSMUST00000025444 2618 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Ccdc43Q9CR29 Col11a2-203ENSMUST00000114255 5722 ntAPPRIS ALT2 TSL 5 BASIC20.29■□□□□ 0.84
Ccdc43Q9CR29 Sigmar1-202ENSMUST00000071561 1547 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Ccdc43Q9CR29 Leng1-201ENSMUST00000019878 2222 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Ccdc43Q9CR29 1700012B09Rik-204ENSMUST00000191047 654 ntAPPRIS ALT2 TSL 3 BASIC20.29■□□□□ 0.84
Ccdc43Q9CR29 Rarb-207ENSMUST00000225921 2756 ntBASIC20.29■□□□□ 0.84
Ccdc43Q9CR29 5330438D12Rik-201ENSMUST00000064101 2229 ntBASIC20.29■□□□□ 0.84
Ccdc43Q9CR29 Smox-202ENSMUST00000110179 1320 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Ccdc43Q9CR29 Mrpl12-201ENSMUST00000043627 1316 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Ccdc43Q9CR29 Apaf1-208ENSMUST00000162618 5151 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
Ccdc43Q9CR29 Smarcd3-208ENSMUST00000195943 1712 ntTSL 5 BASIC20.28■□□□□ 0.84
Ccdc43Q9CR29 Smarcd3-201ENSMUST00000030791 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Ccdc43Q9CR29 Gm13067-201ENSMUST00000134236 404 ntTSL 5 BASIC20.28■□□□□ 0.84
Ccdc43Q9CR29 A830035A12Rik-201ENSMUST00000147445 861 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Ccdc43Q9CR29 Cyyr1-204ENSMUST00000175700 1294 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Ccdc43Q9CR29 Avp-201ENSMUST00000046001 577 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Ccdc43Q9CR29 Prex1-201ENSMUST00000036719 6533 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Ccdc43Q9CR29 Gpr137-203ENSMUST00000099776 1569 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Ccdc43Q9CR29 Pacsin3-203ENSMUST00000111349 1993 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Ccdc43Q9CR29 Nhs-201ENSMUST00000081569 4881 ntAPPRIS P3 TSL 1 (best) BASIC20.28■□□□□ 0.84
Ccdc43Q9CR29 Tob1-201ENSMUST00000041589 2288 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Ccdc43Q9CR29 Iqsec2-203ENSMUST00000112605 6017 ntAPPRIS ALT2 TSL 5 BASIC20.28■□□□□ 0.84
Ccdc43Q9CR29 Gfra1-208ENSMUST00000152507 1937 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.84
Ccdc43Q9CR29 Ankle1-201ENSMUST00000119976 2136 ntAPPRIS P3 TSL 1 (best) BASIC20.27■□□□□ 0.84
Ccdc43Q9CR29 Rnf157-202ENSMUST00000106398 4553 ntAPPRIS ALT2 TSL 5 BASIC20.27■□□□□ 0.84
Ccdc43Q9CR29 Atp9a-211ENSMUST00000178504 3668 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.84
Ccdc43Q9CR29 Arx-201ENSMUST00000046565 2881 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Ccdc43Q9CR29 Syndig1-202ENSMUST00000109935 2050 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.84
Ccdc43Q9CR29 Nbl1-201ENSMUST00000042844 1793 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Ccdc43Q9CR29 C230062I16Rik-202ENSMUST00000207746 1022 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Ccdc43Q9CR29 Myo5b-201ENSMUST00000074157 6745 ntAPPRIS P2 TSL 1 (best) BASIC20.27■□□□□ 0.84
Ccdc43Q9CR29 Snx16-202ENSMUST00000099223 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
Ccdc43Q9CR29 Lmtk2-201ENSMUST00000041804 8114 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Ccdc43Q9CR29 Txnrd2-203ENSMUST00000115606 1905 ntAPPRIS P2 TSL 1 (best) BASIC20.27■□□□□ 0.84
Ccdc43Q9CR29 Gm3020-202ENSMUST00000167430 1933 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Ccdc43Q9CR29 Gm10409-201ENSMUST00000170123 1933 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Ccdc43Q9CR29 Gnas-208ENSMUST00000109087 1716 ntAPPRIS P4 TSL 1 (best) BASIC20.27■□□□□ 0.83
Ccdc43Q9CR29 4930452B06Rik-201ENSMUST00000102996 2681 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
Ccdc43Q9CR29 Paics-201ENSMUST00000031160 2482 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
Ccdc43Q9CR29 Snap91-201ENSMUST00000036347 4237 ntAPPRIS ALT2 TSL 5 BASIC20.26■□□□□ 0.83
Ccdc43Q9CR29 Alcam-201ENSMUST00000023312 6036 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Ccdc43Q9CR29 Nf2-205ENSMUST00000109910 4720 ntAPPRIS P3 TSL 1 (best) BASIC20.26■□□□□ 0.83
Ccdc43Q9CR29 Miga1-201ENSMUST00000068243 2689 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Ccdc43Q9CR29 Zfp821-206ENSMUST00000212964 2033 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Ccdc43Q9CR29 Eno1-202ENSMUST00000080926 2027 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Ccdc43Q9CR29 Tmem151b-201ENSMUST00000180252 4851 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Ccdc43Q9CR29 Dstn-201ENSMUST00000103172 1911 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Ccdc43Q9CR29 Syncrip-205ENSMUST00000173801 2944 ntAPPRIS ALT1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Ccdc43Q9CR29 S1pr4-201ENSMUST00000053646 2386 ntAPPRIS P1 BASIC20.26■□□□□ 0.83
Ccdc43Q9CR29 AU019823-202ENSMUST00000145139 2805 ntTSL 2 BASIC20.26■□□□□ 0.83
Ccdc43Q9CR29 E130218I03Rik-201ENSMUST00000122952 943 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Ccdc43Q9CR29 Prcd-205ENSMUST00000178875 1227 ntTSL 5 BASIC20.26■□□□□ 0.83
Ccdc43Q9CR29 Vkorc1l1-202ENSMUST00000073945 650 ntTSL 2 BASIC20.26■□□□□ 0.83
Ccdc43Q9CR29 Tgif1-209ENSMUST00000166395 1714 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Ccdc43Q9CR29 Ppp3ca-201ENSMUST00000056758 2194 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Ccdc43Q9CR29 Scn1b-203ENSMUST00000211945 1501 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
Ccdc43Q9CR29 Ciz1-205ENSMUST00000113338 2666 ntAPPRIS P3 TSL 5 BASIC20.26■□□□□ 0.83
Ccdc43Q9CR29 Man1c1-202ENSMUST00000054096 4715 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
Ccdc43Q9CR29 Gm30003-201ENSMUST00000200700 1433 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Ccdc43Q9CR29 Trim67-202ENSMUST00000167588 8735 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
Ccdc43Q9CR29 Kcns1-201ENSMUST00000045196 2712 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Ccdc43Q9CR29 Sft2d2-201ENSMUST00000043338 5535 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Ccdc43Q9CR29 Tmem132e-201ENSMUST00000054245 4386 ntAPPRIS P2 TSL 1 (best) BASIC20.25■□□□□ 0.83
Ccdc43Q9CR29 Dmrt1-201ENSMUST00000025755 2340 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Ccdc43Q9CR29 Arfrp1-209ENSMUST00000170190 2483 ntTSL 5 BASIC20.25■□□□□ 0.83
Ccdc43Q9CR29 Gm13146-201ENSMUST00000118508 780 ntBASIC20.25■□□□□ 0.83
Ccdc43Q9CR29 Sirpa-209ENSMUST00000160276 876 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Ccdc43Q9CR29 Gm10300-201ENSMUST00000094662 2296 ntAPPRIS P1 BASIC20.25■□□□□ 0.83
Ccdc43Q9CR29 Srf-201ENSMUST00000015749 4093 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Ccdc43Q9CR29 Magi3-203ENSMUST00000122303 3827 ntAPPRIS P3 TSL 1 (best) BASIC20.25■□□□□ 0.83
Ccdc43Q9CR29 Swsap1-201ENSMUST00000053583 1838 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Ccdc43Q9CR29 Nkd1-201ENSMUST00000034086 3035 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Ccdc43Q9CR29 Pou2f2-205ENSMUST00000108417 1937 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Ccdc43Q9CR29 S100a6-201ENSMUST00000001051 731 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Ccdc43Q9CR29 Gm11713-201ENSMUST00000139941 523 ntTSL 3 BASIC20.24■□□□□ 0.83
Ccdc43Q9CR29 Rasl10b-201ENSMUST00000021022 996 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Ccdc43Q9CR29 Cck-203ENSMUST00000215228 783 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Ccdc43Q9CR29 Ndufa5-201ENSMUST00000023851 875 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Ccdc43Q9CR29 Col9a3-203ENSMUST00000132527 3046 ntAPPRIS P1 TSL 5 BASIC20.24■□□□□ 0.83
Ccdc43Q9CR29 Mapre3-202ENSMUST00000200692 1816 ntTSL 5 BASIC20.24■□□□□ 0.83
Ccdc43Q9CR29 Dusp14-202ENSMUST00000100705 1447 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Ccdc43Q9CR29 Ube2d2a-201ENSMUST00000167406 2393 ntAPPRIS P1 TSL 5 BASIC20.24■□□□□ 0.83
Ccdc43Q9CR29 H2-Q7-201ENSMUST00000071951 1406 ntAPPRIS P2 TSL 1 (best) BASIC20.24■□□□□ 0.83
Ccdc43Q9CR29 H2-Q7-203ENSMUST00000078205 1419 ntTSL 5 BASIC20.24■□□□□ 0.83
Ccdc43Q9CR29 Pparg-202ENSMUST00000171644 2125 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Ccdc43Q9CR29 Nt5c3b-204ENSMUST00000107398 1635 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Ccdc43Q9CR29 Mael-201ENSMUST00000038782 1546 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Ccdc43Q9CR29 Nectin3-202ENSMUST00000023335 9116 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
Ccdc43Q9CR29 Gm19094-201ENSMUST00000209791 1246 ntBASIC20.23■□□□□ 0.83
Ccdc43Q9CR29 Klhl36-201ENSMUST00000034287 2181 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Ccdc43Q9CR29 Zfp692-201ENSMUST00000049353 1860 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Ccdc43Q9CR29 Klhdc9-201ENSMUST00000061878 1558 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Ccdc43Q9CR29 Trim58-201ENSMUST00000075084 2192 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Ccdc43Q9CR29 Grk2-202ENSMUST00000088737 3376 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Retrieved 100 of 76,532 protein–RNA pairs in 18.3 ms