Protein–RNA interactions for Protein: Q9CQX5

Cldnd1, Claudin domain-containing protein 1, mousemouse

Predictions only

Length 253 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cldnd1Q9CQX5 Mzt2-202ENSMUST00000117136 758 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Cldnd1Q9CQX5 5430402O13Rik-201ENSMUST00000126537 869 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Cldnd1Q9CQX5 Cldn18-203ENSMUST00000131922 860 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Cldnd1Q9CQX5 Mir5130-201ENSMUST00000175160 84 ntBASIC18.77■□□□□ 0.6
Cldnd1Q9CQX5 Ank2-226ENSMUST00000189368 339 ntBASIC18.77■□□□□ 0.6
Cldnd1Q9CQX5 Fkbp9-201ENSMUST00000031795 3009 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Cldnd1Q9CQX5 Klhdc3-202ENSMUST00000165007 1973 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
Cldnd1Q9CQX5 Triobp-202ENSMUST00000109688 2553 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.59
Cldnd1Q9CQX5 Ptges3-202ENSMUST00000084771 1559 ntTSL 5 BASIC18.76■□□□□ 0.59
Cldnd1Q9CQX5 Mycbp-202ENSMUST00000106202 1536 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Cldnd1Q9CQX5 Stau2-217ENSMUST00000162751 3030 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Cldnd1Q9CQX5 Lce1j-201ENSMUST00000107304 420 ntAPPRIS P1 BASIC18.76■□□□□ 0.59
Cldnd1Q9CQX5 Spint2-202ENSMUST00000108236 1211 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Cldnd1Q9CQX5 Arpc4-204ENSMUST00000204802 794 ntTSL 3 BASIC18.76■□□□□ 0.59
Cldnd1Q9CQX5 Hsbp1-202ENSMUST00000212468 638 ntAPPRIS P1 TSL 2 BASIC18.76■□□□□ 0.59
Cldnd1Q9CQX5 Gmpr-201ENSMUST00000000260 1580 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Cldnd1Q9CQX5 Klhdc9-201ENSMUST00000061878 1558 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Cldnd1Q9CQX5 Pdp1-204ENSMUST00000108299 2588 ntAPPRIS ALT2 TSL 2 BASIC18.75■□□□□ 0.59
Cldnd1Q9CQX5 Rrs1-201ENSMUST00000072079 2048 ntAPPRIS P1 BASIC18.75■□□□□ 0.59
Cldnd1Q9CQX5 Mafg-202ENSMUST00000106180 732 ntAPPRIS P1 TSL 2 BASIC18.75■□□□□ 0.59
Cldnd1Q9CQX5 Mafg-204ENSMUST00000106182 1104 ntAPPRIS P1 TSL 2 BASIC18.75■□□□□ 0.59
Cldnd1Q9CQX5 Gm14464-201ENSMUST00000119658 1254 ntBASIC18.75■□□□□ 0.59
Cldnd1Q9CQX5 C130032M10Rik-201ENSMUST00000180393 728 ntAPPRIS P1 BASIC18.75■□□□□ 0.59
Cldnd1Q9CQX5 Ly6h-202ENSMUST00000065417 985 ntAPPRIS ALT1 TSL 2 BASIC18.75■□□□□ 0.59
Cldnd1Q9CQX5 2310039H08Rik-201ENSMUST00000071430 773 ntAPPRIS P1 BASIC18.75■□□□□ 0.59
Cldnd1Q9CQX5 AL591207.1-203ENSMUST00000222401 1380 ntTSL 5 BASIC18.75■□□□□ 0.59
Cldnd1Q9CQX5 Ltbp3-201ENSMUST00000081496 5190 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
Cldnd1Q9CQX5 Blcap-202ENSMUST00000109528 2056 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Cldnd1Q9CQX5 Nit1-202ENSMUST00000111295 1335 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
Cldnd1Q9CQX5 Gfi1-202ENSMUST00000065478 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Cldnd1Q9CQX5 9130019P16Rik-201ENSMUST00000135612 1019 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Cldnd1Q9CQX5 Gm26829-201ENSMUST00000180581 934 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Cldnd1Q9CQX5 Nkx2-6-201ENSMUST00000062437 1134 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Cldnd1Q9CQX5 Slc22a23-201ENSMUST00000040336 6251 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Cldnd1Q9CQX5 Chadl-201ENSMUST00000072910 2548 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
Cldnd1Q9CQX5 Plin1-202ENSMUST00000178257 1841 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Cldnd1Q9CQX5 Hoxa10-202ENSMUST00000125581 2565 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Cldnd1Q9CQX5 Asnsd1-202ENSMUST00000123519 983 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Cldnd1Q9CQX5 Gm2274-201ENSMUST00000184539 609 ntBASIC18.73■□□□□ 0.59
Cldnd1Q9CQX5 Gm18101-201ENSMUST00000215769 548 ntBASIC18.73■□□□□ 0.59
Cldnd1Q9CQX5 AC159205.3-201ENSMUST00000224614 874 ntBASIC18.73■□□□□ 0.59
Cldnd1Q9CQX5 Sra1-201ENSMUST00000001415 2061 ntAPPRIS P4 TSL 5 BASIC18.73■□□□□ 0.59
Cldnd1Q9CQX5 Scube1-202ENSMUST00000043634 5161 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Cldnd1Q9CQX5 Akp3-201ENSMUST00000044878 1680 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Cldnd1Q9CQX5 Vav3-201ENSMUST00000046864 5019 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Cldnd1Q9CQX5 Nrxn2-208ENSMUST00000137166 6314 ntAPPRIS ALT2 TSL 5 BASIC18.72■□□□□ 0.59
Cldnd1Q9CQX5 Mvb12b-201ENSMUST00000041555 4998 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Cldnd1Q9CQX5 Agap2-202ENSMUST00000217941 5573 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Cldnd1Q9CQX5 AC126028.2-201ENSMUST00000228100 1833 ntBASIC18.72■□□□□ 0.59
Cldnd1Q9CQX5 Cenpa-205ENSMUST00000144742 1466 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Cldnd1Q9CQX5 Noc2l-201ENSMUST00000179543 2785 ntAPPRIS P2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Cldnd1Q9CQX5 Neurl4-213ENSMUST00000177476 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Cldnd1Q9CQX5 Sigmar1-201ENSMUST00000059354 1640 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Cldnd1Q9CQX5 Homer1-207ENSMUST00000109494 2468 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Cldnd1Q9CQX5 6430573P05Rik-203ENSMUST00000195547 2457 ntBASIC18.72■□□□□ 0.59
Cldnd1Q9CQX5 Tsfm-202ENSMUST00000120547 1271 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Cldnd1Q9CQX5 Gm20544-201ENSMUST00000174338 690 ntTSL 3 BASIC18.72■□□□□ 0.59
Cldnd1Q9CQX5 Sh2b2-204ENSMUST00000196447 1783 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Cldnd1Q9CQX5 Eif2b4-212ENSMUST00000202758 1767 ntTSL 5 BASIC18.72■□□□□ 0.59
Cldnd1Q9CQX5 Lin7a-203ENSMUST00000218031 1769 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Cldnd1Q9CQX5 Isca1-201ENSMUST00000057115 1942 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Cldnd1Q9CQX5 Tmem51-201ENSMUST00000036572 1875 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Cldnd1Q9CQX5 1810055G02Rik-201ENSMUST00000039048 1882 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Cldnd1Q9CQX5 Wnk2-211ENSMUST00000162581 6628 ntAPPRIS ALT2 TSL 5 BASIC18.71■□□□□ 0.59
Cldnd1Q9CQX5 Gm43353-201ENSMUST00000199224 1295 ntBASIC18.71■□□□□ 0.59
Cldnd1Q9CQX5 Psma6-201ENSMUST00000021412 1042 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Cldnd1Q9CQX5 Tnfsf11-201ENSMUST00000022592 2236 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Cldnd1Q9CQX5 Slc30a4-201ENSMUST00000005952 5458 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Cldnd1Q9CQX5 2900052L18Rik-201ENSMUST00000139014 1588 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Cldnd1Q9CQX5 Gsg1-201ENSMUST00000087729 1307 ntAPPRIS P4 TSL 1 (best) BASIC18.71■□□□□ 0.59
Cldnd1Q9CQX5 Gm7609-201ENSMUST00000113402 1538 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Cldnd1Q9CQX5 Tmem132b-201ENSMUST00000031446 7995 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
Cldnd1Q9CQX5 Naglu-201ENSMUST00000001802 2560 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Cldnd1Q9CQX5 4833413E03Rik-201ENSMUST00000013706 1091 ntTSL 5 BASIC18.7■□□□□ 0.58
Cldnd1Q9CQX5 Gm15545-202ENSMUST00000141011 899 ntTSL 3 BASIC18.7■□□□□ 0.58
Cldnd1Q9CQX5 Gm22697-201ENSMUST00000175194 63 ntBASIC18.7■□□□□ 0.58
Cldnd1Q9CQX5 Hint2-201ENSMUST00000030192 610 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Cldnd1Q9CQX5 Impdh2-201ENSMUST00000081111 1858 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Cldnd1Q9CQX5 Stim2-201ENSMUST00000117661 4934 ntAPPRIS P2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Cldnd1Q9CQX5 Zfp69-201ENSMUST00000106280 2362 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
Cldnd1Q9CQX5 Ube2cbp-201ENSMUST00000034986 1790 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Cldnd1Q9CQX5 Gm10654-201ENSMUST00000098653 1633 ntBASIC18.7■□□□□ 0.58
Cldnd1Q9CQX5 Mpdu1-201ENSMUST00000018905 1321 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Cldnd1Q9CQX5 Cklf-208ENSMUST00000212433 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Cldnd1Q9CQX5 Msl3l2-201ENSMUST00000063138 2140 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Cldnd1Q9CQX5 Nfe2-201ENSMUST00000075192 1697 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Cldnd1Q9CQX5 Krt76-201ENSMUST00000100179 2312 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Cldnd1Q9CQX5 Gaa-202ENSMUST00000106258 1369 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Cldnd1Q9CQX5 Gm15751-201ENSMUST00000134552 1862 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Cldnd1Q9CQX5 B3gat2-202ENSMUST00000140583 1737 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Cldnd1Q9CQX5 Runx2-210ENSMUST00000162373 1565 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
Cldnd1Q9CQX5 Prdm8-201ENSMUST00000112959 4553 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Cldnd1Q9CQX5 Mum1-201ENSMUST00000020365 2640 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Cldnd1Q9CQX5 Hist1h2bj-201ENSMUST00000110452 463 ntAPPRIS P1 BASIC18.69■□□□□ 0.58
Cldnd1Q9CQX5 Hist1h2bp-202ENSMUST00000110473 621 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Cldnd1Q9CQX5 Mras-203ENSMUST00000122384 1122 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Cldnd1Q9CQX5 Gm16295-201ENSMUST00000139512 643 ntTSL 3 BASIC18.69■□□□□ 0.58
Cldnd1Q9CQX5 Fuz-206ENSMUST00000207485 1140 ntAPPRIS ALT1 TSL 5 BASIC18.69■□□□□ 0.58
Cldnd1Q9CQX5 AC134329.2-201ENSMUST00000217897 428 ntBASIC18.69■□□□□ 0.58
Cldnd1Q9CQX5 Hist1h2bm-201ENSMUST00000224651 524 ntAPPRIS P1 BASIC18.69■□□□□ 0.58
Retrieved 100 of 76,532 protein–RNA pairs in 28.9 ms