Protein–RNA interactions for Protein: Q99PP6

Trim34a, Tripartite motif-containing protein 34A, mousemouse

Predictions only

Length 485 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim34aQ99PP6 Ctla2a-201ENSMUST00000021880 1373 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
Trim34aQ99PP6 Irx2-201ENSMUST00000074372 2625 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
Trim34aQ99PP6 Rapgef3-207ENSMUST00000134885 1422 ntTSL 5 BASIC22.58■■□□□ 1.21
Trim34aQ99PP6 Bhlhe23-201ENSMUST00000108878 2520 ntAPPRIS P1 BASIC22.58■■□□□ 1.21
Trim34aQ99PP6 B3gat2-202ENSMUST00000140583 1737 ntTSL 1 (best) BASIC22.58■■□□□ 1.21
Trim34aQ99PP6 Tgif1-209ENSMUST00000166395 1714 ntTSL 1 (best) BASIC22.58■■□□□ 1.21
Trim34aQ99PP6 Gnpda1-201ENSMUST00000063814 2289 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
Trim34aQ99PP6 Rps5-202ENSMUST00000108539 794 ntAPPRIS P1 TSL 2 BASIC22.58■■□□□ 1.21
Trim34aQ99PP6 2210408F21Rik-211ENSMUST00000151800 750 ntTSL 1 (best) BASIC22.58■■□□□ 1.21
Trim34aQ99PP6 Ccl27a-219ENSMUST00000173865 657 ntTSL 1 (best) BASIC22.58■■□□□ 1.21
Trim34aQ99PP6 Nudt22-203ENSMUST00000180765 1073 ntAPPRIS P1 TSL 5 BASIC22.58■■□□□ 1.21
Trim34aQ99PP6 Gm26709-202ENSMUST00000223049 819 ntTSL 5 BASIC22.58■■□□□ 1.21
Trim34aQ99PP6 Tsks-202ENSMUST00000120929 1843 ntAPPRIS ALT2 TSL 1 (best) BASIC22.58■■□□□ 1.21
Trim34aQ99PP6 P2ry2-202ENSMUST00000178340 2137 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.2
Trim34aQ99PP6 Ptges3-202ENSMUST00000084771 1559 ntTSL 5 BASIC22.58■■□□□ 1.2
Trim34aQ99PP6 Ruvbl1-201ENSMUST00000032165 1675 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.2
Trim34aQ99PP6 R3hdm4-201ENSMUST00000045628 1898 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.2
Trim34aQ99PP6 Adrb3-202ENSMUST00000117565 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC22.57■■□□□ 1.2
Trim34aQ99PP6 Tlcd1-201ENSMUST00000092880 2700 ntAPPRIS ALT2 TSL 1 (best) BASIC22.57■■□□□ 1.2
Trim34aQ99PP6 Nsl1-203ENSMUST00000139340 837 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
Trim34aQ99PP6 Mir6349-201ENSMUST00000184059 97 ntBASIC22.57■■□□□ 1.2
Trim34aQ99PP6 4930554G22Rik-201ENSMUST00000196102 686 ntBASIC22.57■■□□□ 1.2
Trim34aQ99PP6 Mrps28-201ENSMUST00000042148 783 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
Trim34aQ99PP6 Cldn24-201ENSMUST00000079639 663 ntAPPRIS P1 BASIC22.57■■□□□ 1.2
Trim34aQ99PP6 Myoz1-201ENSMUST00000090469 1289 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
Trim34aQ99PP6 Dusp12-201ENSMUST00000027970 1374 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
Trim34aQ99PP6 9530080O11Rik-201ENSMUST00000137239 1475 ntTSL 2 BASIC22.57■■□□□ 1.2
Trim34aQ99PP6 Dvl1-201ENSMUST00000030948 3358 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
Trim34aQ99PP6 Hira-201ENSMUST00000004222 4218 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
Trim34aQ99PP6 St3gal3-201ENSMUST00000030263 2549 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
Trim34aQ99PP6 Pias2-202ENSMUST00000114777 4968 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
Trim34aQ99PP6 Tmem145-202ENSMUST00000119703 1781 ntAPPRIS ALT2 TSL 5 BASIC22.56■■□□□ 1.2
Trim34aQ99PP6 Cenpa-205ENSMUST00000144742 1466 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
Trim34aQ99PP6 AL591207.1-203ENSMUST00000222401 1380 ntTSL 5 BASIC22.56■■□□□ 1.2
Trim34aQ99PP6 AC156016.1-201ENSMUST00000227190 1035 ntBASIC22.56■■□□□ 1.2
Trim34aQ99PP6 Ica1-203ENSMUST00000115519 1706 ntAPPRIS ALT2 TSL 5 BASIC22.56■■□□□ 1.2
Trim34aQ99PP6 Slc25a39-202ENSMUST00000107098 1606 ntAPPRIS ALT1 TSL 5 BASIC22.56■■□□□ 1.2
Trim34aQ99PP6 4930432B10Rik-202ENSMUST00000181330 1612 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
Trim34aQ99PP6 Kansl1-205ENSMUST00000106977 5510 ntAPPRIS P2 TSL 1 (best) BASIC22.56■■□□□ 1.2
Trim34aQ99PP6 Nudt10-201ENSMUST00000103006 1775 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
Trim34aQ99PP6 Isca1-201ENSMUST00000057115 1942 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
Trim34aQ99PP6 Cln5-201ENSMUST00000022721 2445 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
Trim34aQ99PP6 Nkx2-2-203ENSMUST00000109970 1053 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
Trim34aQ99PP6 Gm12382-201ENSMUST00000122005 922 ntBASIC22.55■■□□□ 1.2
Trim34aQ99PP6 Mrpl13-205ENSMUST00000172387 1223 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
Trim34aQ99PP6 Comtd1-204ENSMUST00000177527 714 ntAPPRIS ALT2 TSL 5 BASIC22.55■■□□□ 1.2
Trim34aQ99PP6 Tbc1d7-201ENSMUST00000021797 1239 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
Trim34aQ99PP6 Gm30025-201ENSMUST00000218555 728 ntBASIC22.55■■□□□ 1.2
Trim34aQ99PP6 Mrpl21-202ENSMUST00000025745 1138 ntAPPRIS P3 TSL 1 (best) BASIC22.55■■□□□ 1.2
Trim34aQ99PP6 Bax-201ENSMUST00000033093 867 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
Trim34aQ99PP6 Syngr1-202ENSMUST00000009728 819 ntAPPRIS ALT2 TSL 1 (best) BASIC22.55■■□□□ 1.2
Trim34aQ99PP6 Sh2b2-204ENSMUST00000196447 1783 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
Trim34aQ99PP6 Cbfb-204ENSMUST00000109395 2709 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
Trim34aQ99PP6 Tymp-201ENSMUST00000023285 2037 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
Trim34aQ99PP6 Cerkl-205ENSMUST00000143974 1623 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
Trim34aQ99PP6 Pno1-201ENSMUST00000020317 1544 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
Trim34aQ99PP6 Maz-203ENSMUST00000205568 2650 ntAPPRIS P1 TSL 5 BASIC22.54■■□□□ 1.2
Trim34aQ99PP6 Rcbtb2-217ENSMUST00000167401 868 ntTSL 5 BASIC22.54■■□□□ 1.2
Trim34aQ99PP6 Tomm20-202ENSMUST00000212771 458 ntTSL 2 BASIC22.54■■□□□ 1.2
Trim34aQ99PP6 Smad6-201ENSMUST00000041029 2971 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
Trim34aQ99PP6 Gabarapl1-201ENSMUST00000032264 1820 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
Trim34aQ99PP6 Gm26860-201ENSMUST00000181674 1489 ntTSL 5 BASIC22.54■■□□□ 1.2
Trim34aQ99PP6 Kdm1a-203ENSMUST00000116273 3008 ntAPPRIS P3 TSL 1 (best) BASIC22.53■■□□□ 1.2
Trim34aQ99PP6 Stx2-202ENSMUST00000100680 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC22.53■■□□□ 1.2
Trim34aQ99PP6 Josd2-203ENSMUST00000118493 922 ntAPPRIS P1 TSL 5 BASIC22.53■■□□□ 1.2
Trim34aQ99PP6 Limd2-202ENSMUST00000064545 798 ntAPPRIS P1 TSL 2 BASIC22.53■■□□□ 1.2
Trim34aQ99PP6 Ndufv1-202ENSMUST00000128787 1436 ntAPPRIS ALT2 TSL 5 BASIC22.53■■□□□ 1.2
Trim34aQ99PP6 Ndufv1-207ENSMUST00000134479 1438 ntTSL 5 BASIC22.53■■□□□ 1.2
Trim34aQ99PP6 Fmnl2-204ENSMUST00000127122 5508 ntTSL 5 BASIC22.53■■□□□ 1.2
Trim34aQ99PP6 Spire1-203ENSMUST00000115050 5405 ntAPPRIS ALT2 TSL 1 (best) BASIC22.53■■□□□ 1.2
Trim34aQ99PP6 Gnb2-204ENSMUST00000111027 1610 ntTSL 5 BASIC22.53■■□□□ 1.2
Trim34aQ99PP6 Cdkl3-206ENSMUST00000109079 2051 ntAPPRIS ALT2 TSL 5 BASIC22.53■■□□□ 1.2
Trim34aQ99PP6 Cdkl3-208ENSMUST00000109081 2063 ntAPPRIS ALT2 TSL 5 BASIC22.53■■□□□ 1.2
Trim34aQ99PP6 Inpp5a-203ENSMUST00000106098 2826 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
Trim34aQ99PP6 Gm26837-201ENSMUST00000180821 2110 ntTSL 5 BASIC22.52■■□□□ 1.2
Trim34aQ99PP6 Azi2-205ENSMUST00000133580 2156 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
Trim34aQ99PP6 Rbm15b-201ENSMUST00000055843 6511 ntAPPRIS P1 BASIC22.52■■□□□ 1.2
Trim34aQ99PP6 Dap3-201ENSMUST00000090938 4760 ntAPPRIS P2 TSL 1 (best) BASIC22.52■■□□□ 1.2
Trim34aQ99PP6 Pitx2-201ENSMUST00000029657 1680 ntTSL 5 BASIC22.52■■□□□ 1.2
Trim34aQ99PP6 Gfi1-203ENSMUST00000159164 2648 ntAPPRIS P3 TSL 1 (best) BASIC22.51■■□□□ 1.19
Trim34aQ99PP6 Gpr137b-ps-203ENSMUST00000220758 1942 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
Trim34aQ99PP6 Ccdc112-201ENSMUST00000072835 2801 ntAPPRIS P1 TSL 5 BASIC22.51■■□□□ 1.19
Trim34aQ99PP6 Fbxw8-201ENSMUST00000049474 5000 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
Trim34aQ99PP6 Gm10231-201ENSMUST00000181584 441 ntBASIC22.51■■□□□ 1.19
Trim34aQ99PP6 Atp5g2-202ENSMUST00000185641 731 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
Trim34aQ99PP6 Cib1-207ENSMUST00000206084 772 ntTSL 3 BASIC22.51■■□□□ 1.19
Trim34aQ99PP6 Gm10175-202ENSMUST00000208752 441 ntBASIC22.51■■□□□ 1.19
Trim34aQ99PP6 Timm23-208ENSMUST00000226683 750 ntBASIC22.51■■□□□ 1.19
Trim34aQ99PP6 Odf3b-204ENSMUST00000227834 930 ntBASIC22.51■■□□□ 1.19
Trim34aQ99PP6 Cib1-202ENSMUST00000071457 702 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
Trim34aQ99PP6 Atp5g2-201ENSMUST00000075630 441 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
Trim34aQ99PP6 Gm10273-201ENSMUST00000092511 1126 ntAPPRIS P1 BASIC22.51■■□□□ 1.19
Trim34aQ99PP6 Gm44544-201ENSMUST00000207052 1844 ntBASIC22.51■■□□□ 1.19
Trim34aQ99PP6 Znrf1-205ENSMUST00000172856 4600 ntAPPRIS P1 TSL 5 BASIC22.51■■□□□ 1.19
Trim34aQ99PP6 Gm7712-202ENSMUST00000222331 1510 ntBASIC22.51■■□□□ 1.19
Trim34aQ99PP6 6030445D17Rik-201ENSMUST00000084593 1728 ntAPPRIS P1 BASIC22.51■■□□□ 1.19
Trim34aQ99PP6 Donson-202ENSMUST00000114031 2147 ntAPPRIS ALT2 TSL 5 BASIC22.51■■□□□ 1.19
Trim34aQ99PP6 Mtcp1-201ENSMUST00000033542 1592 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
Trim34aQ99PP6 Slc35g2-201ENSMUST00000093792 1590 ntAPPRIS P1 TSL 2 BASIC22.5■■□□□ 1.19
Trim34aQ99PP6 Keap1-204ENSMUST00000193982 2163 ntAPPRIS P2 TSL 1 (best) BASIC22.5■■□□□ 1.19
Retrieved 100 of 76,532 protein–RNA pairs in 24.1 ms