Protein–RNA interactions for Protein: Q99PF4

Cdh23, Cadherin-23, mousemouse

Predictions only

Length 3,354 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh23Q99PF4 D230030E09Rik-201ENSMUST00000222459 884 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Cdh23Q99PF4 Ly6g6d-201ENSMUST00000007259 546 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Cdh23Q99PF4 Cldn4-201ENSMUST00000051401 1816 ntAPPRIS P1 BASIC18.77■□□□□ 0.59
Cdh23Q99PF4 Fam159b-201ENSMUST00000043061 1310 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
Cdh23Q99PF4 Casp3-203ENSMUST00000210534 583 ntTSL 5 BASIC18.76■□□□□ 0.59
Cdh23Q99PF4 Habp4-201ENSMUST00000021929 2564 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Cdh23Q99PF4 Pick1-201ENSMUST00000018295 1977 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Cdh23Q99PF4 Rad1-201ENSMUST00000022856 1514 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Cdh23Q99PF4 Tomm6-202ENSMUST00000113302 749 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Cdh23Q99PF4 Gm3764-202ENSMUST00000180582 440 ntTSL 5 BASIC18.76■□□□□ 0.59
Cdh23Q99PF4 Gm38282-201ENSMUST00000192751 695 ntTSL 5 BASIC18.76■□□□□ 0.59
Cdh23Q99PF4 Olfr718-ps1-204ENSMUST00000218872 963 ntAPPRIS ALT2 BASIC18.76■□□□□ 0.59
Cdh23Q99PF4 Pldi-201ENSMUST00000036304 853 ntTSL 2 BASIC18.76■□□□□ 0.59
Cdh23Q99PF4 Golga7b-202ENSMUST00000122375 2836 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Cdh23Q99PF4 Uck1-201ENSMUST00000002625 2005 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Cdh23Q99PF4 Pbx1-202ENSMUST00000072863 1709 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Cdh23Q99PF4 Gaa-202ENSMUST00000106258 1369 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Cdh23Q99PF4 Pno1-201ENSMUST00000020317 1544 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Cdh23Q99PF4 Ndufaf8-202ENSMUST00000185558 427 ntTSL 5 BASIC18.75■□□□□ 0.59
Cdh23Q99PF4 Keap1-204ENSMUST00000193982 2163 ntAPPRIS P2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Cdh23Q99PF4 Prpf19-201ENSMUST00000025642 2134 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Cdh23Q99PF4 Gm43514-201ENSMUST00000198852 424 ntBASIC18.75■□□□□ 0.59
Cdh23Q99PF4 Fbxo7-203ENSMUST00000120344 1655 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Cdh23Q99PF4 Uba5-201ENSMUST00000035166 2404 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Cdh23Q99PF4 Igfbpl1-201ENSMUST00000044297 2864 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Cdh23Q99PF4 Mthfsl-204ENSMUST00000186863 725 ntTSL 2 BASIC18.75■□□□□ 0.59
Cdh23Q99PF4 Uqcr11-201ENSMUST00000020372 445 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Cdh23Q99PF4 1700022H01Rik-201ENSMUST00000219142 387 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Cdh23Q99PF4 Mgarp-201ENSMUST00000038154 1232 ntAPPRIS P2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Cdh23Q99PF4 Zkscan8-202ENSMUST00000110481 728 ntTSL 2 BASIC18.74■□□□□ 0.59
Cdh23Q99PF4 Tsfm-202ENSMUST00000120547 1271 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Cdh23Q99PF4 Hrh3-204ENSMUST00000165248 1224 ntAPPRIS ALT2 TSL 5 BASIC18.74■□□□□ 0.59
Cdh23Q99PF4 Gm42738-201ENSMUST00000201813 439 ntTSL 3 BASIC18.74■□□□□ 0.59
Cdh23Q99PF4 Gng11-201ENSMUST00000031670 919 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Cdh23Q99PF4 Ppp2r5a-201ENSMUST00000067976 3088 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Cdh23Q99PF4 Pdia6-201ENSMUST00000057288 2175 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Cdh23Q99PF4 Nagk-203ENSMUST00000113851 1323 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Cdh23Q99PF4 Tma7-201ENSMUST00000167504 944 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Cdh23Q99PF4 Prr3-209ENSMUST00000174849 581 ntTSL 2 BASIC18.74■□□□□ 0.59
Cdh23Q99PF4 Zfp783-201ENSMUST00000095946 670 ntBASIC18.74■□□□□ 0.59
Cdh23Q99PF4 A230050P20Rik-201ENSMUST00000043911 1683 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Cdh23Q99PF4 Gp5-201ENSMUST00000061190 2196 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Cdh23Q99PF4 Gm37820-201ENSMUST00000194021 2147 ntBASIC18.73■□□□□ 0.59
Cdh23Q99PF4 AW822252-206ENSMUST00000208904 237 ntBASIC18.73■□□□□ 0.59
Cdh23Q99PF4 D830030K20Rik-204ENSMUST00000225885 1142 ntBASIC18.73■□□□□ 0.59
Cdh23Q99PF4 Ntpcr-201ENSMUST00000034313 1155 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Cdh23Q99PF4 Maz-203ENSMUST00000205568 2650 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
Cdh23Q99PF4 Desi2-204ENSMUST00000161075 2590 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Cdh23Q99PF4 Rogdi-207ENSMUST00000202281 1355 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Cdh23Q99PF4 Aicda-202ENSMUST00000160685 1292 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Cdh23Q99PF4 Pgrmc2-201ENSMUST00000058578 3007 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Cdh23Q99PF4 Idh3a-205ENSMUST00000217484 2580 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Cdh23Q99PF4 Nsfl1c-201ENSMUST00000028949 1364 ntAPPRIS ALT1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Cdh23Q99PF4 Mras-202ENSMUST00000119472 1190 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Cdh23Q99PF4 1700095J03Rik-201ENSMUST00000143715 1808 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Cdh23Q99PF4 Gm44544-201ENSMUST00000207052 1844 ntBASIC18.72■□□□□ 0.59
Cdh23Q99PF4 Gm17349-201ENSMUST00000163472 300 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
Cdh23Q99PF4 Tpsg1-201ENSMUST00000024999 1186 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Cdh23Q99PF4 Olfr464-201ENSMUST00000074874 1084 ntAPPRIS P1 BASIC18.72■□□□□ 0.59
Cdh23Q99PF4 1700028E10Rik-201ENSMUST00000181114 2034 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Cdh23Q99PF4 Gm27704-201ENSMUST00000185094 107 ntBASIC18.72■□□□□ 0.59
Cdh23Q99PF4 Bricd5-201ENSMUST00000054946 997 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Cdh23Q99PF4 Izumo2-201ENSMUST00000085422 632 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Cdh23Q99PF4 S100a16-202ENSMUST00000098911 1127 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Cdh23Q99PF4 Praf2-201ENSMUST00000033489 1339 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Cdh23Q99PF4 Nfatc2-201ENSMUST00000029057 2310 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Cdh23Q99PF4 Tymp-201ENSMUST00000023285 2037 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Cdh23Q99PF4 Gnpda1-201ENSMUST00000063814 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Cdh23Q99PF4 Prr3-202ENSMUST00000165613 767 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Cdh23Q99PF4 Lce1a2-201ENSMUST00000029530 715 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Cdh23Q99PF4 Cln5-201ENSMUST00000022721 2445 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Cdh23Q99PF4 Mgat2-201ENSMUST00000060579 2614 ntAPPRIS P1 BASIC18.71■□□□□ 0.59
Cdh23Q99PF4 Sept7-201ENSMUST00000115272 2533 ntAPPRIS ALT1 TSL 5 BASIC18.71■□□□□ 0.59
Cdh23Q99PF4 Rap1a-201ENSMUST00000090678 2407 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Cdh23Q99PF4 Mrpl3-205ENSMUST00000149243 2309 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Cdh23Q99PF4 Gm25016-201ENSMUST00000158399 131 ntBASIC18.71■□□□□ 0.59
Cdh23Q99PF4 Znhit2-201ENSMUST00000162726 1281 ntAPPRIS P1 BASIC18.71■□□□□ 0.59
Cdh23Q99PF4 Egln2-202ENSMUST00000108382 1756 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
Cdh23Q99PF4 Kif1bp-202ENSMUST00000159704 2622 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Cdh23Q99PF4 Med25-201ENSMUST00000003049 2619 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Cdh23Q99PF4 Vstm2b-201ENSMUST00000044705 2627 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
Cdh23Q99PF4 Lsr-205ENSMUST00000205961 2021 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
Cdh23Q99PF4 Ube2cbp-201ENSMUST00000034986 1790 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Cdh23Q99PF4 Samd10-201ENSMUST00000060173 2164 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Cdh23Q99PF4 Hnrnph3-203ENSMUST00000119814 682 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Cdh23Q99PF4 Klhdc3-202ENSMUST00000165007 1973 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Cdh23Q99PF4 Bnip2-203ENSMUST00000117450 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Cdh23Q99PF4 Schip1-205ENSMUST00000182532 2059 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Cdh23Q99PF4 Rab5c-202ENSMUST00000107364 1915 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Cdh23Q99PF4 Gatad1-201ENSMUST00000007559 2545 ntAPPRIS P2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Cdh23Q99PF4 Lhx1os-201ENSMUST00000126072 589 ntTSL 3 BASIC18.7■□□□□ 0.58
Cdh23Q99PF4 Ndufa12-201ENSMUST00000020209 1110 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Cdh23Q99PF4 Krtap1-5-201ENSMUST00000054532 1041 ntAPPRIS P1 BASIC18.7■□□□□ 0.58
Cdh23Q99PF4 Parp12-201ENSMUST00000038398 3231 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Cdh23Q99PF4 Srsf12-201ENSMUST00000067864 2939 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Cdh23Q99PF4 Echdc2-204ENSMUST00000116309 1238 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Cdh23Q99PF4 Kiss1r-202ENSMUST00000219745 979 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Cdh23Q99PF4 Tmem241-205ENSMUST00000209859 1426 ntAPPRIS P4 TSL 1 (best) BASIC18.69■□□□□ 0.58
Cdh23Q99PF4 Skor2-201ENSMUST00000166956 3141 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Cdh23Q99PF4 Alg1-202ENSMUST00000100196 1755 ntAPPRIS P2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Retrieved 100 of 76,532 protein–RNA pairs in 32.1 ms