Protein–RNA interactions for Protein: Q99NI3

Gtf2ird2, General transcription factor II-I repeat domain-containing protein 2, mousemouse

Predictions only

Length 936 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gtf2ird2Q99NI3 Tmem126a-201ENSMUST00000032844 799 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Gtf2ird2Q99NI3 AB041806-201ENSMUST00000062902 2105 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Gtf2ird2Q99NI3 Tnfsf11-201ENSMUST00000022592 2236 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Gtf2ird2Q99NI3 Clic1-201ENSMUST00000007257 1466 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Gtf2ird2Q99NI3 Tmem62-201ENSMUST00000067582 2921 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Gtf2ird2Q99NI3 Ehmt2-203ENSMUST00000097342 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Gtf2ird2Q99NI3 Ciz1-205ENSMUST00000113338 2666 ntAPPRIS P3 TSL 5 BASIC18.75■□□□□ 0.59
Gtf2ird2Q99NI3 Ccdc59-201ENSMUST00000020049 1813 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Gtf2ird2Q99NI3 Hdhd5-201ENSMUST00000075303 1928 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Gtf2ird2Q99NI3 Taf4b-201ENSMUST00000169862 5149 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
Gtf2ird2Q99NI3 Ism1-202ENSMUST00000184404 2964 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Gtf2ird2Q99NI3 Map6-206ENSMUST00000208605 2275 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Gtf2ird2Q99NI3 Gm4737-201ENSMUST00000059524 2093 ntAPPRIS P1 BASIC18.74■□□□□ 0.59
Gtf2ird2Q99NI3 Arhgap23-203ENSMUST00000121799 5816 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
Gtf2ird2Q99NI3 P2rx4-202ENSMUST00000081554 1887 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Gtf2ird2Q99NI3 Alg1-202ENSMUST00000100196 1755 ntAPPRIS P2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Gtf2ird2Q99NI3 Acp4-203ENSMUST00000118216 1454 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
Gtf2ird2Q99NI3 Rilpl2-201ENSMUST00000031347 1391 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Gtf2ird2Q99NI3 Cfl1-201ENSMUST00000116560 1148 ntTSL 5 BASIC18.74■□□□□ 0.59
Gtf2ird2Q99NI3 Arl6ip4-202ENSMUST00000122394 982 ntAPPRIS ALT2 TSL 5 BASIC18.74■□□□□ 0.59
Gtf2ird2Q99NI3 Gm37856-201ENSMUST00000191634 999 ntBASIC18.74■□□□□ 0.59
Gtf2ird2Q99NI3 AC135637.1-201ENSMUST00000227750 365 ntBASIC18.74■□□□□ 0.59
Gtf2ird2Q99NI3 Dnajb2-201ENSMUST00000055223 1199 ntTSL 5 BASIC18.74■□□□□ 0.59
Gtf2ird2Q99NI3 Rps16-201ENSMUST00000082134 1109 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Gtf2ird2Q99NI3 Soga1-201ENSMUST00000069098 7864 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Gtf2ird2Q99NI3 Fbxo24-202ENSMUST00000111002 2306 ntTSL 5 BASIC18.74■□□□□ 0.59
Gtf2ird2Q99NI3 Tmem79-203ENSMUST00000107553 2053 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Gtf2ird2Q99NI3 AU019823-202ENSMUST00000145139 2805 ntTSL 2 BASIC18.73■□□□□ 0.59
Gtf2ird2Q99NI3 Vps9d1-203ENSMUST00000122363 2952 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
Gtf2ird2Q99NI3 Shisa7-203ENSMUST00000119433 3481 ntAPPRIS P2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Gtf2ird2Q99NI3 Gm12896-201ENSMUST00000118430 226 ntBASIC18.73■□□□□ 0.59
Gtf2ird2Q99NI3 Crybb1-201ENSMUST00000031286 882 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Gtf2ird2Q99NI3 Nfu1-201ENSMUST00000032060 948 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
Gtf2ird2Q99NI3 Mrps10-201ENSMUST00000060752 1109 ntTSL 5 BASIC18.73■□□□□ 0.59
Gtf2ird2Q99NI3 Acvr1b-201ENSMUST00000000544 4413 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Gtf2ird2Q99NI3 Rarb-207ENSMUST00000225921 2756 ntBASIC18.73■□□□□ 0.59
Gtf2ird2Q99NI3 Mmp15-201ENSMUST00000034243 5135 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Gtf2ird2Q99NI3 Lbp-202ENSMUST00000109491 1322 ntTSL 2 BASIC18.73■□□□□ 0.59
Gtf2ird2Q99NI3 Txnrd2-203ENSMUST00000115606 1905 ntAPPRIS P2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Gtf2ird2Q99NI3 Fam43b-201ENSMUST00000105032 2437 ntAPPRIS P1 BASIC18.72■□□□□ 0.59
Gtf2ird2Q99NI3 Chd3os-201ENSMUST00000129321 2081 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Gtf2ird2Q99NI3 Nfatc2-201ENSMUST00000029057 2310 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Gtf2ird2Q99NI3 Alad-202ENSMUST00000107444 1247 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Gtf2ird2Q99NI3 Gng2-202ENSMUST00000159028 458 ntAPPRIS P1 TSL 2 BASIC18.72■□□□□ 0.59
Gtf2ird2Q99NI3 Trmt13-210ENSMUST00000198454 880 ntBASIC18.72■□□□□ 0.59
Gtf2ird2Q99NI3 Mbip-201ENSMUST00000021416 1512 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Gtf2ird2Q99NI3 Actl6a-201ENSMUST00000029214 2010 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Gtf2ird2Q99NI3 Cfap206-202ENSMUST00000108136 1688 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Gtf2ird2Q99NI3 Mfsd10-201ENSMUST00000001109 1907 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Gtf2ird2Q99NI3 Rhbdd3-202ENSMUST00000101610 2333 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Gtf2ird2Q99NI3 Dpf1-203ENSMUST00000108230 1553 ntTSL 5 BASIC18.72■□□□□ 0.59
Gtf2ird2Q99NI3 Rps6ka3-201ENSMUST00000033671 7244 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Gtf2ird2Q99NI3 Rxra-201ENSMUST00000077257 4905 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Gtf2ird2Q99NI3 Mfsd14a-201ENSMUST00000029570 2782 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Gtf2ird2Q99NI3 Kiz-201ENSMUST00000099278 2183 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Gtf2ird2Q99NI3 Esco1-202ENSMUST00000097670 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Gtf2ird2Q99NI3 Gm2399-201ENSMUST00000104944 225 ntBASIC18.71■□□□□ 0.59
Gtf2ird2Q99NI3 Pigp-202ENSMUST00000113906 745 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Gtf2ird2Q99NI3 Alcam-206ENSMUST00000168071 878 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Gtf2ird2Q99NI3 D930007J09Rik-201ENSMUST00000057911 393 ntAPPRIS P1 BASIC18.71■□□□□ 0.59
Gtf2ird2Q99NI3 Ssx2ip-201ENSMUST00000039021 3410 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Gtf2ird2Q99NI3 Vav2-201ENSMUST00000056176 5221 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Gtf2ird2Q99NI3 Dio3-201ENSMUST00000097228 1449 ntBASIC18.71■□□□□ 0.59
Gtf2ird2Q99NI3 Zfp706-201ENSMUST00000078976 4417 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Gtf2ird2Q99NI3 Il15ra-201ENSMUST00000078834 1600 ntAPPRIS P3 TSL 5 BASIC18.71■□□□□ 0.58
Gtf2ird2Q99NI3 Gm35558-201ENSMUST00000222675 2219 ntBASIC18.7■□□□□ 0.58
Gtf2ird2Q99NI3 Dlg1-202ENSMUST00000064477 4663 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
Gtf2ird2Q99NI3 Prmt3-201ENSMUST00000032715 2507 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Gtf2ird2Q99NI3 Nsfl1c-203ENSMUST00000103160 1369 ntTSL 5 BASIC18.7■□□□□ 0.58
Gtf2ird2Q99NI3 Selenos-201ENSMUST00000101801 1191 ntAPPRIS P2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Gtf2ird2Q99NI3 Snca-201ENSMUST00000114268 1280 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Gtf2ird2Q99NI3 Ndufb2-202ENSMUST00000119379 455 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Gtf2ird2Q99NI3 Ndufv1-202ENSMUST00000128787 1436 ntAPPRIS ALT2 TSL 5 BASIC18.7■□□□□ 0.58
Gtf2ird2Q99NI3 Ndufv1-207ENSMUST00000134479 1438 ntTSL 5 BASIC18.7■□□□□ 0.58
Gtf2ird2Q99NI3 Lrch3-208ENSMUST00000165616 1875 ntTSL 5 BASIC18.7■□□□□ 0.58
Gtf2ird2Q99NI3 Pacsin3-215ENSMUST00000168916 1859 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Gtf2ird2Q99NI3 AA465934-203ENSMUST00000177150 383 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Gtf2ird2Q99NI3 Gm37805-201ENSMUST00000192612 1094 ntBASIC18.7■□□□□ 0.58
Gtf2ird2Q99NI3 Gm45472-201ENSMUST00000211295 1426 ntTSL 5 BASIC18.7■□□□□ 0.58
Gtf2ird2Q99NI3 Pacsin3-201ENSMUST00000028694 1862 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Gtf2ird2Q99NI3 Asap2-203ENSMUST00000090834 5097 ntTSL 5 BASIC18.7■□□□□ 0.58
Gtf2ird2Q99NI3 Krt4-201ENSMUST00000023797 2132 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Gtf2ird2Q99NI3 Ripk2-201ENSMUST00000037035 2692 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Gtf2ird2Q99NI3 Cyp2u1-203ENSMUST00000200236 1716 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Gtf2ird2Q99NI3 6030445D17Rik-201ENSMUST00000084593 1728 ntAPPRIS P1 BASIC18.69■□□□□ 0.58
Gtf2ird2Q99NI3 4930560O18Rik-201ENSMUST00000207051 1595 ntBASIC18.69■□□□□ 0.58
Gtf2ird2Q99NI3 Rrp9-201ENSMUST00000047721 1586 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Gtf2ird2Q99NI3 Dlg3-204ENSMUST00000113736 4940 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Gtf2ird2Q99NI3 Fam189a1-201ENSMUST00000119118 4801 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
Gtf2ird2Q99NI3 Bmpr1b-203ENSMUST00000106230 2147 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Gtf2ird2Q99NI3 Gm8520-201ENSMUST00000186517 868 ntBASIC18.69■□□□□ 0.58
Gtf2ird2Q99NI3 Gm44878-201ENSMUST00000205812 1295 ntBASIC18.69■□□□□ 0.58
Gtf2ird2Q99NI3 Rpl18-202ENSMUST00000209287 1027 ntTSL 3 BASIC18.69■□□□□ 0.58
Gtf2ird2Q99NI3 Prrg2-201ENSMUST00000007981 1295 ntAPPRIS P2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Gtf2ird2Q99NI3 Paics-201ENSMUST00000031160 2482 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Gtf2ird2Q99NI3 Tsks-202ENSMUST00000120929 1843 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Gtf2ird2Q99NI3 Kmt5b-204ENSMUST00000113970 2975 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Gtf2ird2Q99NI3 Syt3-203ENSMUST00000120262 2096 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
Gtf2ird2Q99NI3 Rab3ip-201ENSMUST00000020375 2690 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Gtf2ird2Q99NI3 Naa50-202ENSMUST00000063542 2136 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Retrieved 100 of 76,532 protein–RNA pairs in 27.7 ms