Protein–RNA interactions for Protein: Q99NH8

Trem2, Triggering receptor expressed on myeloid cells 2, mousemouse

Predictions only

Length 227 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trem2Q99NH8 Ddx41-201ENSMUST00000021956 2205 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Trem2Q99NH8 Efna4-201ENSMUST00000029674 1599 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Trem2Q99NH8 H2-Q7-202ENSMUST00000076256 1523 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
Trem2Q99NH8 Tsen2-203ENSMUST00000130425 638 ntTSL 3 BASIC18.61■□□□□ 0.57
Trem2Q99NH8 Gm26571-201ENSMUST00000181399 666 ntBASIC18.61■□□□□ 0.57
Trem2Q99NH8 Rps2-ps11-201ENSMUST00000195283 868 ntBASIC18.61■□□□□ 0.57
Trem2Q99NH8 Psmb5-201ENSMUST00000022803 899 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Trem2Q99NH8 Ckm-201ENSMUST00000003643 1235 ntTSL 5 BASIC18.61■□□□□ 0.57
Trem2Q99NH8 Cdkn2a-201ENSMUST00000060501 852 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Trem2Q99NH8 Map7d2-203ENSMUST00000112471 3670 ntAPPRIS P3 TSL 5 BASIC18.61■□□□□ 0.57
Trem2Q99NH8 Vsig10-201ENSMUST00000086464 2052 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
Trem2Q99NH8 Tmod1-201ENSMUST00000107773 3158 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
Trem2Q99NH8 Sqor-201ENSMUST00000005953 1804 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Trem2Q99NH8 Mboat1-201ENSMUST00000047311 2905 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Trem2Q99NH8 Zfp219-204ENSMUST00000226522 2804 ntAPPRIS P2 BASIC18.6■□□□□ 0.57
Trem2Q99NH8 Kat14-201ENSMUST00000028911 3801 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Trem2Q99NH8 Ankle1-202ENSMUST00000120725 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Trem2Q99NH8 Rsph6a-201ENSMUST00000035521 2354 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Trem2Q99NH8 2610528J11Rik-202ENSMUST00000106367 736 ntAPPRIS P1 TSL 2 BASIC18.6■□□□□ 0.57
Trem2Q99NH8 Foxk1-202ENSMUST00000198422 687 ntTSL 3 BASIC18.6■□□□□ 0.57
Trem2Q99NH8 Gm6916-201ENSMUST00000205277 828 ntTSL 3 BASIC18.6■□□□□ 0.57
Trem2Q99NH8 Uqcc2-201ENSMUST00000025045 500 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Trem2Q99NH8 Tmem62-201ENSMUST00000067582 2921 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Trem2Q99NH8 Acvr1b-201ENSMUST00000000544 4413 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Trem2Q99NH8 Fgfr1-215ENSMUST00000179592 5041 ntTSL 5 BASIC18.6■□□□□ 0.57
Trem2Q99NH8 Agbl5-209ENSMUST00000201225 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Trem2Q99NH8 Ldlrad4-201ENSMUST00000063775 2493 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Trem2Q99NH8 Ncoa5-203ENSMUST00000122070 3117 ntTSL 5 BASIC18.6■□□□□ 0.57
Trem2Q99NH8 Gm44832-201ENSMUST00000208849 2303 ntBASIC18.6■□□□□ 0.57
Trem2Q99NH8 Arhgef9-208ENSMUST00000128565 2285 ntTSL 5 BASIC18.6■□□□□ 0.57
Trem2Q99NH8 Socs6-203ENSMUST00000125362 2814 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Trem2Q99NH8 Sdcbp-201ENSMUST00000029912 2745 ntAPPRIS ALT1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Trem2Q99NH8 Adcy3-202ENSMUST00000124505 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Trem2Q99NH8 Pcbp1-201ENSMUST00000053015 1830 ntAPPRIS P1 BASIC18.59■□□□□ 0.57
Trem2Q99NH8 Mgll-203ENSMUST00000113582 1034 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Trem2Q99NH8 Tmbim6-202ENSMUST00000159209 944 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
Trem2Q99NH8 Gm8495-201ENSMUST00000188740 694 ntBASIC18.59■□□□□ 0.57
Trem2Q99NH8 Fst-202ENSMUST00000223640 2612 ntBASIC18.59■□□□□ 0.57
Trem2Q99NH8 Ano10-206ENSMUST00000216670 2108 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Trem2Q99NH8 Mtch2-205ENSMUST00000136872 2596 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Trem2Q99NH8 Fam222a-201ENSMUST00000043650 2930 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Trem2Q99NH8 Hdgfl3-201ENSMUST00000026094 2865 ntAPPRIS ALT1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Trem2Q99NH8 Crlf3-201ENSMUST00000061283 2396 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Trem2Q99NH8 4930518J20Rik-201ENSMUST00000195064 1478 ntBASIC18.58■□□□□ 0.57
Trem2Q99NH8 Slc25a47-202ENSMUST00000221080 1890 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
Trem2Q99NH8 Gm26674-201ENSMUST00000180770 1446 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
Trem2Q99NH8 Tekt1-201ENSMUST00000021155 1447 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Trem2Q99NH8 Rpl26-202ENSMUST00000101014 657 ntAPPRIS ALT1 TSL 5 BASIC18.58■□□□□ 0.56
Trem2Q99NH8 Gm7290-201ENSMUST00000104990 617 ntBASIC18.58■□□□□ 0.56
Trem2Q99NH8 Gm12918-201ENSMUST00000120234 636 ntBASIC18.58■□□□□ 0.56
Trem2Q99NH8 Gm15710-201ENSMUST00000121821 636 ntBASIC18.58■□□□□ 0.56
Trem2Q99NH8 Gm5075-201ENSMUST00000196916 622 ntBASIC18.58■□□□□ 0.56
Trem2Q99NH8 Gm42882-201ENSMUST00000201788 506 ntTSL 3 BASIC18.58■□□□□ 0.56
Trem2Q99NH8 1810059H22Rik-205ENSMUST00000204570 690 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
Trem2Q99NH8 Arv1-201ENSMUST00000034463 1165 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Trem2Q99NH8 Bricd5-201ENSMUST00000054946 997 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Trem2Q99NH8 Rpl13-ps6-201ENSMUST00000079761 636 ntBASIC18.58■□□□□ 0.56
Trem2Q99NH8 Rpl13-ps3-201ENSMUST00000079960 624 ntBASIC18.58■□□□□ 0.56
Trem2Q99NH8 Trpc4ap-202ENSMUST00000103140 3091 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.56
Trem2Q99NH8 9330111N05Rik-202ENSMUST00000181043 2449 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
Trem2Q99NH8 Ddit4-201ENSMUST00000020308 1755 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Trem2Q99NH8 Slc29a1-201ENSMUST00000051574 1996 ntAPPRIS ALT2 TSL 5 BASIC18.57■□□□□ 0.56
Trem2Q99NH8 Zscan12-201ENSMUST00000053293 2270 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Trem2Q99NH8 Gm13509-201ENSMUST00000119733 1308 ntBASIC18.57■□□□□ 0.56
Trem2Q99NH8 Etv2-201ENSMUST00000108147 1048 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Trem2Q99NH8 Gm45890-201ENSMUST00000212043 1026 ntTSL 5 BASIC18.57■□□□□ 0.56
Trem2Q99NH8 Lsm6-201ENSMUST00000051867 2107 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Trem2Q99NH8 Gm6365-201ENSMUST00000054711 744 ntBASIC18.57■□□□□ 0.56
Trem2Q99NH8 Acy3-201ENSMUST00000054030 1505 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Trem2Q99NH8 Adam22-205ENSMUST00000115385 2318 ntTSL 2 BASIC18.57■□□□□ 0.56
Trem2Q99NH8 Sh2b2-204ENSMUST00000196447 1783 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Trem2Q99NH8 Surf4-201ENSMUST00000015011 3281 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Trem2Q99NH8 Fgf2os-201ENSMUST00000153785 1441 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Trem2Q99NH8 Fmnl2-204ENSMUST00000127122 5508 ntTSL 5 BASIC18.57■□□□□ 0.56
Trem2Q99NH8 Gm15408-201ENSMUST00000124198 1379 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Trem2Q99NH8 Tmem80-206ENSMUST00000133012 1524 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Trem2Q99NH8 Knstrn-202ENSMUST00000110842 925 ntAPPRIS ALT2 TSL 3 BASIC18.56■□□□□ 0.56
Trem2Q99NH8 Gm53-201ENSMUST00000129907 1172 ntTSL 2 BASIC18.56■□□□□ 0.56
Trem2Q99NH8 Gm42555-201ENSMUST00000199304 1039 ntBASIC18.56■□□□□ 0.56
Trem2Q99NH8 Tmem53-201ENSMUST00000062824 991 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Trem2Q99NH8 Prdm8-201ENSMUST00000112959 4553 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Trem2Q99NH8 Dexi-203ENSMUST00000184863 2537 ntAPPRIS P1 TSL 2 BASIC18.56■□□□□ 0.56
Trem2Q99NH8 C1ql3-201ENSMUST00000061545 2535 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Trem2Q99NH8 Phf14-201ENSMUST00000090632 3985 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Trem2Q99NH8 Nlgn2-201ENSMUST00000056484 5003 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Trem2Q99NH8 Rab20-201ENSMUST00000033900 1392 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Trem2Q99NH8 Ciz1-201ENSMUST00000048964 2771 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
Trem2Q99NH8 Aunip-201ENSMUST00000105866 1275 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Trem2Q99NH8 A730056A06Rik-202ENSMUST00000206959 526 ntTSL 3 BASIC18.55■□□□□ 0.56
Trem2Q99NH8 Pacs2-207ENSMUST00000223502 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
Trem2Q99NH8 Osbpl1a-207ENSMUST00000121808 3030 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Trem2Q99NH8 Dixdc1-207ENSMUST00000121634 2420 ntTSL 5 BASIC18.55■□□□□ 0.56
Trem2Q99NH8 Lancl2-201ENSMUST00000050077 2509 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Trem2Q99NH8 Lemd3-201ENSMUST00000119093 4370 ntAPPRIS ALT2 TSL 2 BASIC18.55■□□□□ 0.56
Trem2Q99NH8 Sirt7-201ENSMUST00000080202 1727 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Trem2Q99NH8 BC017158-201ENSMUST00000033044 2627 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Trem2Q99NH8 Smim15-205ENSMUST00000225972 2097 ntAPPRIS P1 BASIC18.54■□□□□ 0.56
Trem2Q99NH8 Pfn2-201ENSMUST00000066882 2342 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Trem2Q99NH8 Mtx1-201ENSMUST00000073572 1617 ntAPPRIS P2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Trem2Q99NH8 Zfp467-201ENSMUST00000101443 599 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Retrieved 100 of 76,532 protein–RNA pairs in 44.5 ms