Protein–RNA interactions for Protein: Q99M85

Scrt1, Transcriptional repressor scratch 1, mousemouse

Predictions only

Length 348 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scrt1Q99M85 1600023N17Rik-201ENSMUST00000196242 1007 ntBASIC15.98■□□□□ 0.15
Scrt1Q99M85 Mrps28-201ENSMUST00000042148 783 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Scrt1Q99M85 Snx12-201ENSMUST00000077876 1002 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
Scrt1Q99M85 Ahcyl1-201ENSMUST00000029490 3863 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Scrt1Q99M85 Tbc1d13-201ENSMUST00000044556 3595 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Scrt1Q99M85 Nbn-201ENSMUST00000029879 2533 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Scrt1Q99M85 Bmpr1b-202ENSMUST00000098568 1910 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Scrt1Q99M85 Gfer-201ENSMUST00000046839 1775 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Scrt1Q99M85 Faxc-201ENSMUST00000029908 2627 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Scrt1Q99M85 Tm7sf2-202ENSMUST00000113543 1498 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
Scrt1Q99M85 Hes1-201ENSMUST00000023171 1468 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Scrt1Q99M85 Zfp692-202ENSMUST00000153510 1887 ntAPPRIS P1 TSL 5 BASIC15.97■□□□□ 0.15
Scrt1Q99M85 Mpg-201ENSMUST00000020528 1737 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Scrt1Q99M85 Fgf3-201ENSMUST00000105898 2299 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Scrt1Q99M85 Bend3-202ENSMUST00000167488 6337 ntAPPRIS P1 TSL 2 BASIC15.97■□□□□ 0.15
Scrt1Q99M85 Nexmif-201ENSMUST00000056502 5211 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
Scrt1Q99M85 Rbm18-201ENSMUST00000028251 2617 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Scrt1Q99M85 2210408F21Rik-204ENSMUST00000136571 478 ntTSL 3 BASIC15.97■□□□□ 0.15
Scrt1Q99M85 AI480526-205ENSMUST00000160255 1095 ntTSL 5 BASIC15.97■□□□□ 0.15
Scrt1Q99M85 Ankrd39-202ENSMUST00000194894 664 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
Scrt1Q99M85 Paox-202ENSMUST00000097967 1024 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
Scrt1Q99M85 Tax1bp3-201ENSMUST00000040687 1523 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Scrt1Q99M85 Tor2a-201ENSMUST00000009707 1536 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Scrt1Q99M85 Gm16262-201ENSMUST00000162306 1751 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
Scrt1Q99M85 Nt5c3b-204ENSMUST00000107398 1635 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
Scrt1Q99M85 Aen-202ENSMUST00000107423 2230 ntAPPRIS P3 TSL 5 BASIC15.96■□□□□ 0.15
Scrt1Q99M85 Gm28523-201ENSMUST00000190040 1588 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
Scrt1Q99M85 Stard3-201ENSMUST00000018311 2070 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Scrt1Q99M85 9430060I03Rik-201ENSMUST00000191563 1689 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
Scrt1Q99M85 Gpr137-202ENSMUST00000099774 1434 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
Scrt1Q99M85 Dnpep-204ENSMUST00000185797 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.15
Scrt1Q99M85 Mtus2-205ENSMUST00000110515 1792 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Scrt1Q99M85 1700065D16Rik-204ENSMUST00000189348 1540 ntTSL 2 BASIC15.96■□□□□ 0.15
Scrt1Q99M85 Rin3-202ENSMUST00000101114 2394 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
Scrt1Q99M85 H2-K2-201ENSMUST00000174250 1049 ntBASIC15.96■□□□□ 0.15
Scrt1Q99M85 2510002D24Rik-204ENSMUST00000191388 995 ntTSL 5 BASIC15.96■□□□□ 0.15
Scrt1Q99M85 Aga-203ENSMUST00000211424 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.15
Scrt1Q99M85 Crabp1-201ENSMUST00000034830 802 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Scrt1Q99M85 Id1-201ENSMUST00000038368 934 ntAPPRIS P2 TSL 1 (best) BASIC15.96■□□□□ 0.15
Scrt1Q99M85 Fgfr1op2-202ENSMUST00000058245 918 ntTSL 2 BASIC15.96■□□□□ 0.15
Scrt1Q99M85 Gm10819-201ENSMUST00000099988 561 ntBASIC15.96■□□□□ 0.15
Scrt1Q99M85 Nlgn2-201ENSMUST00000056484 5003 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Scrt1Q99M85 Tfeb-203ENSMUST00000113284 1974 ntTSL 5 BASIC15.96■□□□□ 0.15
Scrt1Q99M85 Mycl-202ENSMUST00000106252 3293 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Scrt1Q99M85 Hs3st5-202ENSMUST00000167191 2408 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Scrt1Q99M85 Prmt3-201ENSMUST00000032715 2507 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
Scrt1Q99M85 Lemd3-201ENSMUST00000119093 4370 ntAPPRIS ALT2 TSL 2 BASIC15.96■□□□□ 0.14
Scrt1Q99M85 Tbkbp1-203ENSMUST00000107614 2391 ntAPPRIS ALT2 TSL 5 BASIC15.95■□□□□ 0.14
Scrt1Q99M85 Kcnn2-208ENSMUST00000211323 2046 ntAPPRIS P2 TSL 1 (best) BASIC15.95■□□□□ 0.14
Scrt1Q99M85 Plekhm2-201ENSMUST00000030751 4154 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
Scrt1Q99M85 Dmrt1-201ENSMUST00000025755 2340 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Scrt1Q99M85 Ezh2-204ENSMUST00000114618 2775 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
Scrt1Q99M85 Palm-202ENSMUST00000105379 2519 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
Scrt1Q99M85 Lhx8-201ENSMUST00000177846 2076 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
Scrt1Q99M85 Crybb1-201ENSMUST00000031286 882 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Scrt1Q99M85 Cmtm7-201ENSMUST00000035009 993 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Scrt1Q99M85 Nme2-202ENSMUST00000072566 734 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Scrt1Q99M85 Nsfl1c-203ENSMUST00000103160 1369 ntTSL 5 BASIC15.95■□□□□ 0.14
Scrt1Q99M85 Lrrc73-201ENSMUST00000095262 1384 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Scrt1Q99M85 Gm10167-201ENSMUST00000150411 1479 ntBASIC15.95■□□□□ 0.14
Scrt1Q99M85 Mob2-201ENSMUST00000084418 1490 ntAPPRIS P2 TSL 1 (best) BASIC15.95■□□□□ 0.14
Scrt1Q99M85 Tmem55b-205ENSMUST00000160835 2755 ntAPPRIS P3 TSL 1 (best) BASIC15.95■□□□□ 0.14
Scrt1Q99M85 Ttc39a-203ENSMUST00000106619 1778 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
Scrt1Q99M85 Fzd2-201ENSMUST00000057893 3663 ntAPPRIS P1 BASIC15.95■□□□□ 0.14
Scrt1Q99M85 Oxsr1-201ENSMUST00000040853 4647 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Scrt1Q99M85 Fbxw5-201ENSMUST00000015239 2388 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Scrt1Q99M85 Cacng4-201ENSMUST00000021066 3500 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Scrt1Q99M85 Snrnp70-201ENSMUST00000074575 1735 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Scrt1Q99M85 Podxl-201ENSMUST00000026698 5379 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Scrt1Q99M85 Mzt1-201ENSMUST00000042662 2240 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Scrt1Q99M85 Kcns1-201ENSMUST00000045196 2712 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Scrt1Q99M85 Wnk2-202ENSMUST00000049265 6738 ntAPPRIS ALT2 TSL 5 BASIC15.94■□□□□ 0.14
Scrt1Q99M85 Gm20695-202ENSMUST00000176233 1012 ntAPPRIS P1 TSL 5 BASIC15.94■□□□□ 0.14
Scrt1Q99M85 Gm10231-201ENSMUST00000181584 441 ntBASIC15.94■□□□□ 0.14
Scrt1Q99M85 Atp5g2-202ENSMUST00000185641 731 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Scrt1Q99M85 Gm10175-202ENSMUST00000208752 441 ntBASIC15.94■□□□□ 0.14
Scrt1Q99M85 4930554C24Rik-202ENSMUST00000216019 1159 ntTSL 5 BASIC15.94■□□□□ 0.14
Scrt1Q99M85 Gm35240-201ENSMUST00000218335 661 ntTSL 2 BASIC15.94■□□□□ 0.14
Scrt1Q99M85 Nrn1l-201ENSMUST00000060167 617 ntAPPRIS P3 TSL 1 (best) BASIC15.94■□□□□ 0.14
Scrt1Q99M85 Psmd4-201ENSMUST00000071664 1276 ntAPPRIS ALT2 TSL 1 (best) BASIC15.94■□□□□ 0.14
Scrt1Q99M85 Atp5g2-201ENSMUST00000075630 441 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Scrt1Q99M85 6820408C15Rik-201ENSMUST00000039961 1684 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Scrt1Q99M85 Tcf7l1-202ENSMUST00000114053 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC15.94■□□□□ 0.14
Scrt1Q99M85 Pianp-201ENSMUST00000032479 2250 ntAPPRIS P2 TSL 1 (best) BASIC15.94■□□□□ 0.14
Scrt1Q99M85 Clcn4-206ENSMUST00000210594 2539 ntAPPRIS ALT2 TSL 5 BASIC15.94■□□□□ 0.14
Scrt1Q99M85 Papola-212ENSMUST00000168186 2436 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
Scrt1Q99M85 Dnajb11-201ENSMUST00000004574 1927 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Scrt1Q99M85 Gm5540-201ENSMUST00000131852 1848 ntBASIC15.94■□□□□ 0.14
Scrt1Q99M85 Foxj2-201ENSMUST00000003238 5283 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Scrt1Q99M85 Mdfi-202ENSMUST00000066368 1711 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Scrt1Q99M85 Cobll1-202ENSMUST00000102726 5031 ntAPPRIS P3 TSL 1 (best) BASIC15.93■□□□□ 0.14
Scrt1Q99M85 Cobll1-203ENSMUST00000112429 5045 ntAPPRIS ALT2 TSL 5 BASIC15.93■□□□□ 0.14
Scrt1Q99M85 Brpf3-201ENSMUST00000004985 5766 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Scrt1Q99M85 Pgf-204ENSMUST00000223220 2080 ntAPPRIS ALT2 TSL 1 (best) BASIC15.93■□□□□ 0.14
Scrt1Q99M85 Them6-201ENSMUST00000070923 1784 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Scrt1Q99M85 Eml4-203ENSMUST00000112363 5238 ntAPPRIS ALT2 TSL 1 (best) BASIC15.93■□□□□ 0.14
Scrt1Q99M85 Dusp12-201ENSMUST00000027970 1374 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Scrt1Q99M85 Gm43799-201ENSMUST00000201845 579 ntBASIC15.93■□□□□ 0.14
Scrt1Q99M85 4732471J01Rik-202ENSMUST00000205787 991 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
Scrt1Q99M85 Prrg2-201ENSMUST00000007981 1295 ntAPPRIS P2 TSL 1 (best) BASIC15.93■□□□□ 0.14
Retrieved 100 of 76,532 protein–RNA pairs in 17.8 ms