Protein–RNA interactions for Protein: Q99LM2

Cdk5rap3, CDK5 regulatory subunit-associated protein 3, mousemouse

Predictions only

Length 503 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdk5rap3Q99LM2 Fndc4-202ENSMUST00000172435 2333 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Cdk5rap3Q99LM2 Larp4b-201ENSMUST00000091829 5720 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Cdk5rap3Q99LM2 Orai3-201ENSMUST00000061587 1996 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Cdk5rap3Q99LM2 Il15ra-201ENSMUST00000078834 1600 ntAPPRIS P3 TSL 5 BASIC18.94■□□□□ 0.62
Cdk5rap3Q99LM2 Rbm24-201ENSMUST00000037923 3086 ntAPPRIS P1 TSL 2 BASIC18.94■□□□□ 0.62
Cdk5rap3Q99LM2 U2af2-201ENSMUST00000005041 2183 ntAPPRIS ALT1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Cdk5rap3Q99LM2 Prkci-201ENSMUST00000108249 4708 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Cdk5rap3Q99LM2 Ubtf-204ENSMUST00000107117 3258 ntAPPRIS ALT2 TSL 5 BASIC18.94■□□□□ 0.62
Cdk5rap3Q99LM2 Gm13146-201ENSMUST00000118508 780 ntBASIC18.94■□□□□ 0.62
Cdk5rap3Q99LM2 AC122828.1-201ENSMUST00000220785 489 ntTSL 3 BASIC18.94■□□□□ 0.62
Cdk5rap3Q99LM2 Gm9988-201ENSMUST00000069786 435 ntBASIC18.94■□□□□ 0.62
Cdk5rap3Q99LM2 Abr-202ENSMUST00000072740 5394 ntAPPRIS P1 TSL 5 BASIC18.94■□□□□ 0.62
Cdk5rap3Q99LM2 Smu1-201ENSMUST00000030117 2418 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Cdk5rap3Q99LM2 Esco1-202ENSMUST00000097670 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
Cdk5rap3Q99LM2 Pacs2-207ENSMUST00000223502 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
Cdk5rap3Q99LM2 Zc3h15-201ENSMUST00000081591 2111 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Cdk5rap3Q99LM2 Cds2-202ENSMUST00000103181 8396 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Cdk5rap3Q99LM2 Cpeb2-204ENSMUST00000166713 6846 ntAPPRIS ALT2 TSL 5 BASIC18.94■□□□□ 0.62
Cdk5rap3Q99LM2 Sfr1-201ENSMUST00000099353 1583 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Cdk5rap3Q99LM2 B3galnt2-207ENSMUST00000221974 2439 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Cdk5rap3Q99LM2 Gm38308-201ENSMUST00000194934 1809 ntBASIC18.93■□□□□ 0.62
Cdk5rap3Q99LM2 Scaf8-201ENSMUST00000076734 4869 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Cdk5rap3Q99LM2 Negr1-202ENSMUST00000074015 4983 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Cdk5rap3Q99LM2 Nfu1-202ENSMUST00000117583 950 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
Cdk5rap3Q99LM2 Dlgap2-209ENSMUST00000152652 3842 ntAPPRIS P4 TSL 1 (best) BASIC18.93■□□□□ 0.62
Cdk5rap3Q99LM2 Gm21168-201ENSMUST00000199646 1096 ntBASIC18.93■□□□□ 0.62
Cdk5rap3Q99LM2 AC107452.1-201ENSMUST00000227963 481 ntBASIC18.93■□□□□ 0.62
Cdk5rap3Q99LM2 1700012B09Rik-201ENSMUST00000060330 688 ntAPPRIS P2 TSL 1 (best) BASIC18.93■□□□□ 0.62
Cdk5rap3Q99LM2 Col4a3bp-202ENSMUST00000109444 5285 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Cdk5rap3Q99LM2 Alyref-201ENSMUST00000026125 3527 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Cdk5rap3Q99LM2 Dus1l-202ENSMUST00000106133 1762 ntAPPRIS ALT2 TSL 5 BASIC18.93■□□□□ 0.62
Cdk5rap3Q99LM2 Gfer-201ENSMUST00000046839 1775 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Cdk5rap3Q99LM2 Ssc4d-204ENSMUST00000111153 2745 ntAPPRIS P1 TSL 5 BASIC18.93■□□□□ 0.62
Cdk5rap3Q99LM2 Arrb2-204ENSMUST00000102564 1848 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Cdk5rap3Q99LM2 Fam107a-202ENSMUST00000120411 2093 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Cdk5rap3Q99LM2 Gm45606-201ENSMUST00000209836 2795 ntBASIC18.93■□□□□ 0.62
Cdk5rap3Q99LM2 Gm8309-201ENSMUST00000206627 1448 ntBASIC18.92■□□□□ 0.62
Cdk5rap3Q99LM2 Zfpm1-201ENSMUST00000054052 3390 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Cdk5rap3Q99LM2 Gm16262-201ENSMUST00000162306 1751 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Cdk5rap3Q99LM2 A830035A12Rik-201ENSMUST00000147445 861 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Cdk5rap3Q99LM2 Rnf39-202ENSMUST00000173072 631 ntTSL 2 BASIC18.92■□□□□ 0.62
Cdk5rap3Q99LM2 Nr2c2ap-202ENSMUST00000211898 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
Cdk5rap3Q99LM2 Dtd2-202ENSMUST00000085404 1012 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Cdk5rap3Q99LM2 Cpd-201ENSMUST00000021201 7946 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Cdk5rap3Q99LM2 Por-201ENSMUST00000005651 2636 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Cdk5rap3Q99LM2 Gls-204ENSMUST00000114513 4966 ntAPPRIS P3 TSL 5 BASIC18.92■□□□□ 0.62
Cdk5rap3Q99LM2 Reep4-203ENSMUST00000226563 1444 ntBASIC18.91■□□□□ 0.62
Cdk5rap3Q99LM2 Slit3-201ENSMUST00000069837 5228 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Cdk5rap3Q99LM2 Atp9a-211ENSMUST00000178504 3668 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
Cdk5rap3Q99LM2 Tbcel-201ENSMUST00000066148 5000 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Cdk5rap3Q99LM2 S100a6-201ENSMUST00000001051 731 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Cdk5rap3Q99LM2 Rpl21-203ENSMUST00000099272 1067 ntAPPRIS P1 TSL 3 BASIC18.91■□□□□ 0.62
Cdk5rap3Q99LM2 Tspan17-202ENSMUST00000099503 822 ntAPPRIS ALT1 TSL 5 BASIC18.91■□□□□ 0.62
Cdk5rap3Q99LM2 Arhgef9-208ENSMUST00000128565 2285 ntTSL 5 BASIC18.91■□□□□ 0.62
Cdk5rap3Q99LM2 Tulp1-201ENSMUST00000041819 2017 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Cdk5rap3Q99LM2 Rbm11-202ENSMUST00000114249 2750 ntAPPRIS ALT2 TSL 5 BASIC18.91■□□□□ 0.62
Cdk5rap3Q99LM2 Agbl5-209ENSMUST00000201225 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
Cdk5rap3Q99LM2 Gm5828-201ENSMUST00000071842 1860 ntBASIC18.9■□□□□ 0.62
Cdk5rap3Q99LM2 Mbd6-202ENSMUST00000119078 4287 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
Cdk5rap3Q99LM2 Sart1-201ENSMUST00000044207 5091 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Cdk5rap3Q99LM2 Gm13790-201ENSMUST00000156209 473 ntTSL 3 BASIC18.9■□□□□ 0.62
Cdk5rap3Q99LM2 Gamt-201ENSMUST00000020359 979 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Cdk5rap3Q99LM2 Rasgrp2-224ENSMUST00000167240 2192 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
Cdk5rap3Q99LM2 Fst-202ENSMUST00000223640 2612 ntBASIC18.9■□□□□ 0.62
Cdk5rap3Q99LM2 Phax-202ENSMUST00000130163 1386 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
Cdk5rap3Q99LM2 Golga7-202ENSMUST00000121783 1945 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Cdk5rap3Q99LM2 Wnt10b-202ENSMUST00000166022 1594 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
Cdk5rap3Q99LM2 Epn1-207ENSMUST00000208634 2127 ntAPPRIS ALT2 TSL 5 BASIC18.89■□□□□ 0.62
Cdk5rap3Q99LM2 Man1c1-201ENSMUST00000038628 4285 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
Cdk5rap3Q99LM2 Gm16432-201ENSMUST00000094273 1663 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Cdk5rap3Q99LM2 Cacul1-201ENSMUST00000081790 5790 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.61
Cdk5rap3Q99LM2 AC121961.1-201ENSMUST00000218594 1779 ntBASIC18.89■□□□□ 0.61
Cdk5rap3Q99LM2 Gm13534-201ENSMUST00000121169 513 ntBASIC18.89■□□□□ 0.61
Cdk5rap3Q99LM2 Gm2011-201ENSMUST00000203124 1263 ntBASIC18.89■□□□□ 0.61
Cdk5rap3Q99LM2 Bri3-201ENSMUST00000056578 955 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Cdk5rap3Q99LM2 Abhd5-202ENSMUST00000111497 2576 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Cdk5rap3Q99LM2 Ccdc149-201ENSMUST00000059428 3295 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.61
Cdk5rap3Q99LM2 Srsf11-202ENSMUST00000072875 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
Cdk5rap3Q99LM2 Ano10-206ENSMUST00000216670 2108 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Cdk5rap3Q99LM2 Sbf1-201ENSMUST00000123791 6190 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.61
Cdk5rap3Q99LM2 Gm4675-202ENSMUST00000164755 2322 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Cdk5rap3Q99LM2 Nfix-204ENSMUST00000109764 5476 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Cdk5rap3Q99LM2 Npepl1-201ENSMUST00000044415 2467 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Cdk5rap3Q99LM2 Rtkn-203ENSMUST00000121093 2597 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
Cdk5rap3Q99LM2 Fam46a-202ENSMUST00000187711 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
Cdk5rap3Q99LM2 Pgrmc1-201ENSMUST00000073339 1857 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Cdk5rap3Q99LM2 Akain1-201ENSMUST00000169935 2296 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Cdk5rap3Q99LM2 Zscan12-201ENSMUST00000053293 2270 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Cdk5rap3Q99LM2 Fem1c-201ENSMUST00000036226 5726 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Cdk5rap3Q99LM2 Dexi-203ENSMUST00000184863 2537 ntAPPRIS P1 TSL 2 BASIC18.88■□□□□ 0.61
Cdk5rap3Q99LM2 Ppp1r12b-203ENSMUST00000112163 828 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Cdk5rap3Q99LM2 Far2os2-201ENSMUST00000149815 980 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Cdk5rap3Q99LM2 Mpc1-208ENSMUST00000155364 958 ntAPPRIS P1 TSL 2 BASIC18.88■□□□□ 0.61
Cdk5rap3Q99LM2 Ypel3-210ENSMUST00000170882 1050 ntAPPRIS P1 TSL 3 BASIC18.88■□□□□ 0.61
Cdk5rap3Q99LM2 Mrpl40-201ENSMUST00000023391 1185 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Cdk5rap3Q99LM2 E130116L18Rik-201ENSMUST00000066954 306 ntAPPRIS P1 BASIC18.88■□□□□ 0.61
Cdk5rap3Q99LM2 Rpl13-201ENSMUST00000000756 780 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Cdk5rap3Q99LM2 Gm26995-201ENSMUST00000182216 1306 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Cdk5rap3Q99LM2 Olfr94-201ENSMUST00000055324 1304 ntAPPRIS P2 BASIC18.88■□□□□ 0.61
Cdk5rap3Q99LM2 Foxj3-209ENSMUST00000162267 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
Retrieved 100 of 76,532 protein–RNA pairs in 19.7 ms