Protein–RNA interactions for Protein: Q99LC2

Cstf1, Cleavage stimulation factor subunit 1, mousemouse

Known RBP Predictions only

Length 431 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cstf1Q99LC2 Cnn1-203ENSMUST00000214601 1225 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Cstf1Q99LC2 Banf1-201ENSMUST00000025762 735 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Cstf1Q99LC2 Fkbp11-201ENSMUST00000003445 731 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Cstf1Q99LC2 Inmt-201ENSMUST00000003569 1077 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Cstf1Q99LC2 Thap3-201ENSMUST00000036680 1124 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
Cstf1Q99LC2 Tsr3-201ENSMUST00000063574 1192 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Cstf1Q99LC2 Eif1b-201ENSMUST00000007139 1035 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Cstf1Q99LC2 Larp1-203ENSMUST00000178636 6617 ntAPPRIS P2 TSL 5 BASIC18.22■□□□□ 0.51
Cstf1Q99LC2 Bspry-202ENSMUST00000107449 2167 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Cstf1Q99LC2 Ehmt2-201ENSMUST00000013931 4026 ntAPPRIS P4 TSL 1 (best) BASIC18.22■□□□□ 0.51
Cstf1Q99LC2 Hat1-202ENSMUST00000112122 1899 ntAPPRIS ALT2 TSL 5 BASIC18.22■□□□□ 0.51
Cstf1Q99LC2 Map4k4-201ENSMUST00000163854 5782 ntAPPRIS ALT2 TSL 5 BASIC18.22■□□□□ 0.51
Cstf1Q99LC2 Nudt3-201ENSMUST00000025050 2193 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Cstf1Q99LC2 Ubxn2a-201ENSMUST00000020962 2696 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Cstf1Q99LC2 Proca1-203ENSMUST00000108317 1359 ntAPPRIS ALT2 TSL 5 BASIC18.21■□□□□ 0.51
Cstf1Q99LC2 Rchy1-201ENSMUST00000031345 1967 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Cstf1Q99LC2 Wnt10b-203ENSMUST00000226610 2217 ntAPPRIS P1 BASIC18.21■□□□□ 0.51
Cstf1Q99LC2 Zdhhc12-202ENSMUST00000102865 1165 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Cstf1Q99LC2 Rasgrp2-206ENSMUST00000113472 2124 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Cstf1Q99LC2 Hilpda-202ENSMUST00000115289 658 ntAPPRIS P1 TSL 3 BASIC18.21■□□□□ 0.51
Cstf1Q99LC2 Utf1-201ENSMUST00000168457 1227 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Cstf1Q99LC2 Spata25-201ENSMUST00000017911 786 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Cstf1Q99LC2 Gm19391-201ENSMUST00000196653 999 ntTSL 3 BASIC18.21■□□□□ 0.51
Cstf1Q99LC2 Tmem14c-201ENSMUST00000021790 914 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Cstf1Q99LC2 Hist3h2ba-201ENSMUST00000078267 614 ntAPPRIS P1 BASIC18.21■□□□□ 0.51
Cstf1Q99LC2 Gzmd-201ENSMUST00000082093 964 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Cstf1Q99LC2 Klrg2-201ENSMUST00000096030 2276 ntAPPRIS P2 TSL 1 (best) BASIC18.21■□□□□ 0.51
Cstf1Q99LC2 Wnk2-205ENSMUST00000110097 6882 ntAPPRIS ALT2 TSL 5 BASIC18.21■□□□□ 0.51
Cstf1Q99LC2 Wnk2-203ENSMUST00000091623 6897 ntAPPRIS P4 TSL 5 BASIC18.21■□□□□ 0.51
Cstf1Q99LC2 Tspan9-201ENSMUST00000032503 1405 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Cstf1Q99LC2 Trim14-201ENSMUST00000046897 1429 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Cstf1Q99LC2 D030062O11Rik-201ENSMUST00000192660 2806 ntBASIC18.21■□□□□ 0.51
Cstf1Q99LC2 Efna4-201ENSMUST00000029674 1599 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Cstf1Q99LC2 Dpf1-202ENSMUST00000065181 1574 ntAPPRIS ALT1 TSL 5 BASIC18.21■□□□□ 0.51
Cstf1Q99LC2 Adat2-201ENSMUST00000019944 1466 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Cstf1Q99LC2 Faap20-201ENSMUST00000097747 1479 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Cstf1Q99LC2 Aplp1-201ENSMUST00000006828 2343 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Cstf1Q99LC2 Izumo1r-204ENSMUST00000121116 726 ntTSL 2 BASIC18.2■□□□□ 0.5
Cstf1Q99LC2 Gm45618-201ENSMUST00000209890 660 ntAPPRIS P1 BASIC18.2■□□□□ 0.5
Cstf1Q99LC2 Ptpmt1-203ENSMUST00000125001 3183 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Cstf1Q99LC2 Krt24-201ENSMUST00000017255 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Cstf1Q99LC2 Plekhm2-201ENSMUST00000030751 4154 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Cstf1Q99LC2 Zyg11a-202ENSMUST00000106690 2421 ntAPPRIS ALT2 TSL 5 BASIC18.2■□□□□ 0.5
Cstf1Q99LC2 Dscc1-201ENSMUST00000023059 1324 ntAPPRIS P2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Cstf1Q99LC2 Sys1-202ENSMUST00000109352 2001 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
Cstf1Q99LC2 Adcy3-202ENSMUST00000124505 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Cstf1Q99LC2 Snx15-201ENSMUST00000025702 1635 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Cstf1Q99LC2 Dstn-201ENSMUST00000103172 1911 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Cstf1Q99LC2 Ptger3-202ENSMUST00000173533 2097 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Cstf1Q99LC2 Ttc9b-201ENSMUST00000008088 2052 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Cstf1Q99LC2 Ntmt1-201ENSMUST00000041830 1387 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Cstf1Q99LC2 Fndc11-201ENSMUST00000050026 1387 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Cstf1Q99LC2 Zcchc24-201ENSMUST00000069180 4556 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Cstf1Q99LC2 Fbxo44-201ENSMUST00000057907 1829 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Cstf1Q99LC2 Glrb-201ENSMUST00000029654 3029 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Cstf1Q99LC2 Tram1-201ENSMUST00000027068 2938 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Cstf1Q99LC2 Bricd5-201ENSMUST00000054946 997 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Cstf1Q99LC2 Slc35d3-201ENSMUST00000059805 2630 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Cstf1Q99LC2 Cldn24-201ENSMUST00000079639 663 ntAPPRIS P1 BASIC18.19■□□□□ 0.5
Cstf1Q99LC2 Ankrd40-203ENSMUST00000107818 3487 ntAPPRIS P3 TSL 5 BASIC18.19■□□□□ 0.5
Cstf1Q99LC2 9130221H12Rik-201ENSMUST00000169914 1465 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Cstf1Q99LC2 Pard3-219ENSMUST00000162309 5659 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
Cstf1Q99LC2 Vstm2b-201ENSMUST00000044705 2627 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
Cstf1Q99LC2 Fgfrl1-201ENSMUST00000013633 2329 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Cstf1Q99LC2 Pank2-204ENSMUST00000150843 4266 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Cstf1Q99LC2 Gm15138-201ENSMUST00000151778 379 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Cstf1Q99LC2 1810026B05Rik-205ENSMUST00000184855 409 ntTSL 3 BASIC18.18■□□□□ 0.5
Cstf1Q99LC2 Gm10517-202ENSMUST00000192970 758 ntBASIC18.18■□□□□ 0.5
Cstf1Q99LC2 Gm42545-201ENSMUST00000202755 922 ntBASIC18.18■□□□□ 0.5
Cstf1Q99LC2 Fxyd1-208ENSMUST00000205807 539 ntTSL 3 BASIC18.18■□□□□ 0.5
Cstf1Q99LC2 Spata33-206ENSMUST00000212637 569 ntAPPRIS ALT2 TSL 2 BASIC18.18■□□□□ 0.5
Cstf1Q99LC2 Odf3b-204ENSMUST00000227834 930 ntBASIC18.18■□□□□ 0.5
Cstf1Q99LC2 Birc5-201ENSMUST00000081387 947 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Cstf1Q99LC2 Hist1h2aj-201ENSMUST00000091710 352 ntBASIC18.18■□□□□ 0.5
Cstf1Q99LC2 Cerk-201ENSMUST00000044332 4518 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Cstf1Q99LC2 Gabbr1-201ENSMUST00000025338 5248 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Cstf1Q99LC2 D11Wsu47e-201ENSMUST00000042227 2196 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Cstf1Q99LC2 Mrps16-201ENSMUST00000061444 2572 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Cstf1Q99LC2 Zbed3-201ENSMUST00000045909 1894 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Cstf1Q99LC2 Syt17-203ENSMUST00000203485 1932 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Cstf1Q99LC2 Anks3-201ENSMUST00000023157 2483 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Cstf1Q99LC2 Zfp653-201ENSMUST00000043922 2108 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
Cstf1Q99LC2 Ank1-207ENSMUST00000118733 8201 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Cstf1Q99LC2 Slc9a2-203ENSMUST00000192345 2507 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Cstf1Q99LC2 Ablim1-204ENSMUST00000111524 1251 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Cstf1Q99LC2 Prss16-204ENSMUST00000150547 1159 ntTSL 3 BASIC18.17■□□□□ 0.5
Cstf1Q99LC2 Gm28793-201ENSMUST00000190845 413 ntTSL 5 BASIC18.17■□□□□ 0.5
Cstf1Q99LC2 Ssr2-207ENSMUST00000195014 1059 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Cstf1Q99LC2 Gm10138-203ENSMUST00000206952 366 ntBASIC18.17■□□□□ 0.5
Cstf1Q99LC2 Gm18025-201ENSMUST00000221733 862 ntBASIC18.17■□□□□ 0.5
Cstf1Q99LC2 Timm23-208ENSMUST00000226683 750 ntBASIC18.17■□□□□ 0.5
Cstf1Q99LC2 Mrpl21-201ENSMUST00000025743 802 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Cstf1Q99LC2 0610009B22Rik-201ENSMUST00000007921 813 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Cstf1Q99LC2 Gm10273-201ENSMUST00000092511 1126 ntAPPRIS P1 BASIC18.17■□□□□ 0.5
Cstf1Q99LC2 Sae1-201ENSMUST00000094815 1875 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Cstf1Q99LC2 E030030I06Rik-202ENSMUST00000179054 2081 ntAPPRIS P4 TSL 1 (best) BASIC18.17■□□□□ 0.5
Cstf1Q99LC2 Ppp1r16a-201ENSMUST00000037551 2692 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Cstf1Q99LC2 Spint1-203ENSMUST00000110817 2323 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Cstf1Q99LC2 Fgfr1-215ENSMUST00000179592 5041 ntTSL 5 BASIC18.17■□□□□ 0.5
Cstf1Q99LC2 Cerkl-205ENSMUST00000143974 1623 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Retrieved 100 of 76,532 protein–RNA pairs in 30 ms