Protein–RNA interactions for Protein: Q91Y11

Pcdha9, Protocadherin alpha-9, mousemouse

Predictions only

Length 979 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha9Q91Y11 Pard3-219ENSMUST00000162309 5659 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
Pcdha9Q91Y11 Map6-202ENSMUST00000107100 2335 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Pcdha9Q91Y11 Ube2d2a-201ENSMUST00000167406 2393 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
Pcdha9Q91Y11 Wnk2-211ENSMUST00000162581 6628 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
Pcdha9Q91Y11 Miga1-201ENSMUST00000068243 2689 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Pcdha9Q91Y11 Golga7-202ENSMUST00000121783 1945 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Pcdha9Q91Y11 Map7d2-203ENSMUST00000112471 3670 ntAPPRIS P3 TSL 5 BASIC19.43■□□□□ 0.7
Pcdha9Q91Y11 Mrpl10-201ENSMUST00000001485 1708 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Pcdha9Q91Y11 Foxj1-201ENSMUST00000036215 2623 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Pcdha9Q91Y11 Henmt1-202ENSMUST00000098680 1466 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Pcdha9Q91Y11 Rpl27-202ENSMUST00000107249 732 ntAPPRIS P1 TSL 2 BASIC19.42■□□□□ 0.7
Pcdha9Q91Y11 Tomm6-201ENSMUST00000113301 594 ntAPPRIS P1 TSL 2 BASIC19.42■□□□□ 0.7
Pcdha9Q91Y11 Dsg2-203ENSMUST00000121837 953 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Pcdha9Q91Y11 Gng10-201ENSMUST00000041160 1192 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Pcdha9Q91Y11 Bex2-201ENSMUST00000049130 903 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Pcdha9Q91Y11 Prrg2-201ENSMUST00000007981 1295 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Pcdha9Q91Y11 Hist2h2ac-201ENSMUST00000090782 520 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
Pcdha9Q91Y11 Nlrp5-ps-201ENSMUST00000044683 1913 ntTSL 2 BASIC19.42■□□□□ 0.7
Pcdha9Q91Y11 Gm15558-201ENSMUST00000126849 2018 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Pcdha9Q91Y11 Iscu-202ENSMUST00000112311 1395 ntTSL 2 BASIC19.42■□□□□ 0.7
Pcdha9Q91Y11 AI314180-201ENSMUST00000055822 1478 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Pcdha9Q91Y11 Cnpy1-201ENSMUST00000117098 2661 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Pcdha9Q91Y11 Rrp9-201ENSMUST00000047721 1586 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Pcdha9Q91Y11 Nlgn2-202ENSMUST00000108634 5568 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Pcdha9Q91Y11 Shc2-201ENSMUST00000020564 3243 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
Pcdha9Q91Y11 Arhgap23-203ENSMUST00000121799 5816 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
Pcdha9Q91Y11 Gm2399-201ENSMUST00000104944 225 ntBASIC19.41■□□□□ 0.7
Pcdha9Q91Y11 Josd2-205ENSMUST00000120852 727 ntAPPRIS P1 TSL 3 BASIC19.41■□□□□ 0.7
Pcdha9Q91Y11 Nudt8-203ENSMUST00000122924 1082 ntTSL 2 BASIC19.41■□□□□ 0.7
Pcdha9Q91Y11 Gm46218-201ENSMUST00000215448 801 ntTSL 5 BASIC19.41■□□□□ 0.7
Pcdha9Q91Y11 1110004E09Rik-201ENSMUST00000023694 1143 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Pcdha9Q91Y11 Olfr322-201ENSMUST00000072030 984 ntAPPRIS P1 BASIC19.41■□□□□ 0.7
Pcdha9Q91Y11 Mgll-205ENSMUST00000150180 1312 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Pcdha9Q91Y11 Tuba3b-201ENSMUST00000087445 1775 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Pcdha9Q91Y11 Fzd2-201ENSMUST00000057893 3663 ntAPPRIS P1 BASIC19.4■□□□□ 0.7
Pcdha9Q91Y11 Mtmr14-201ENSMUST00000113146 2676 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Pcdha9Q91Y11 Cdkl3-203ENSMUST00000109076 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Pcdha9Q91Y11 Eif3b-201ENSMUST00000100507 2945 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Pcdha9Q91Y11 Gfer-201ENSMUST00000046839 1775 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Pcdha9Q91Y11 Rps14-202ENSMUST00000118551 602 ntAPPRIS P1 TSL 2 BASIC19.4■□□□□ 0.7
Pcdha9Q91Y11 Dnajc19-204ENSMUST00000120805 551 ntTSL 2 BASIC19.4■□□□□ 0.7
Pcdha9Q91Y11 Nnat-210ENSMUST00000173839 1135 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Pcdha9Q91Y11 1700018M17Rik-201ENSMUST00000052502 456 ntBASIC19.4■□□□□ 0.7
Pcdha9Q91Y11 Gtf2h2-201ENSMUST00000066940 1065 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Pcdha9Q91Y11 Mplkip-201ENSMUST00000049744 2672 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Pcdha9Q91Y11 Tex264-203ENSMUST00000169068 1364 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Pcdha9Q91Y11 Pex16-201ENSMUST00000028650 1392 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Pcdha9Q91Y11 Itsn2-201ENSMUST00000062580 5987 ntAPPRIS P2 TSL 5 BASIC19.39■□□□□ 0.7
Pcdha9Q91Y11 Kat14-201ENSMUST00000028911 3801 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
Pcdha9Q91Y11 Lrrc43-201ENSMUST00000094327 2046 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.69
Pcdha9Q91Y11 Tmem44-204ENSMUST00000140402 2405 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Pcdha9Q91Y11 Pigp-202ENSMUST00000113906 745 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Pcdha9Q91Y11 Cox16-207ENSMUST00000169124 685 ntTSL 2 BASIC19.39■□□□□ 0.69
Pcdha9Q91Y11 Tssk6-201ENSMUST00000050373 1335 ntAPPRIS P1 BASIC19.39■□□□□ 0.69
Pcdha9Q91Y11 Mfsd14a-201ENSMUST00000029570 2782 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Pcdha9Q91Y11 Dennd2a-201ENSMUST00000036877 4468 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Pcdha9Q91Y11 Ttyh3-201ENSMUST00000042661 4658 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Pcdha9Q91Y11 Gm10575-201ENSMUST00000097947 1671 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Pcdha9Q91Y11 Cacng4-201ENSMUST00000021066 3500 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Pcdha9Q91Y11 Wnk2-204ENSMUST00000110096 6534 ntAPPRIS ALT2 TSL 5 BASIC19.38■□□□□ 0.69
Pcdha9Q91Y11 Mycl-202ENSMUST00000106252 3293 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Pcdha9Q91Y11 Smad7-201ENSMUST00000026999 4278 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Pcdha9Q91Y11 Lsp1-204ENSMUST00000105967 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
Pcdha9Q91Y11 Polr2c-201ENSMUST00000109521 1580 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Pcdha9Q91Y11 Vkorc1-202ENSMUST00000119922 387 ntTSL 3 BASIC19.38■□□□□ 0.69
Pcdha9Q91Y11 Gm12441-201ENSMUST00000121806 588 ntBASIC19.38■□□□□ 0.69
Pcdha9Q91Y11 3110082J24Rik-201ENSMUST00000127749 327 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
Pcdha9Q91Y11 Tsc22d1-214ENSMUST00000177207 1476 ntTSL 3 BASIC19.38■□□□□ 0.69
Pcdha9Q91Y11 Anks1b-208ENSMUST00000182053 1649 ntTSL 5 BASIC19.38■□□□□ 0.69
Pcdha9Q91Y11 Gm38345-201ENSMUST00000192635 1748 ntBASIC19.38■□□□□ 0.69
Pcdha9Q91Y11 Anapc5-203ENSMUST00000196640 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
Pcdha9Q91Y11 Gm45472-201ENSMUST00000211295 1426 ntTSL 5 BASIC19.38■□□□□ 0.69
Pcdha9Q91Y11 Fbxo45-201ENSMUST00000042732 4179 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Pcdha9Q91Y11 Rbm15b-201ENSMUST00000055843 6511 ntAPPRIS P1 BASIC19.38■□□□□ 0.69
Pcdha9Q91Y11 D930007J09Rik-201ENSMUST00000057911 393 ntAPPRIS P1 BASIC19.38■□□□□ 0.69
Pcdha9Q91Y11 Ergic3-201ENSMUST00000006035 1377 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Pcdha9Q91Y11 Ddx39b-201ENSMUST00000068056 1739 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Pcdha9Q91Y11 Gm10065-201ENSMUST00000076238 345 ntAPPRIS P1 BASIC19.38■□□□□ 0.69
Pcdha9Q91Y11 Crtap-201ENSMUST00000084881 1674 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Pcdha9Q91Y11 Dtwd2-201ENSMUST00000025383 2476 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Pcdha9Q91Y11 Chka-201ENSMUST00000025760 2319 ntAPPRIS ALT2 TSL 5 BASIC19.37■□□□□ 0.69
Pcdha9Q91Y11 Tfap4-201ENSMUST00000005862 2113 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Pcdha9Q91Y11 Egln2-202ENSMUST00000108382 1756 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
Pcdha9Q91Y11 H2-DMa-201ENSMUST00000042121 1555 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Pcdha9Q91Y11 Snca-201ENSMUST00000114268 1280 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Pcdha9Q91Y11 Gm29257-201ENSMUST00000186115 639 ntBASIC19.37■□□□□ 0.69
Pcdha9Q91Y11 B3galnt2-207ENSMUST00000221974 2439 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Pcdha9Q91Y11 Kcnip2-209ENSMUST00000162528 2395 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Pcdha9Q91Y11 Plin5-202ENSMUST00000113072 1986 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Pcdha9Q91Y11 Pqlc1-201ENSMUST00000070135 1911 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Pcdha9Q91Y11 Pacsin3-215ENSMUST00000168916 1859 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Pcdha9Q91Y11 Pacsin3-201ENSMUST00000028694 1862 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Pcdha9Q91Y11 Eva1a-201ENSMUST00000042974 1773 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Pcdha9Q91Y11 Gatad2a-202ENSMUST00000116463 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Pcdha9Q91Y11 Zdhhc14-201ENSMUST00000089185 3115 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Pcdha9Q91Y11 Traf3-203ENSMUST00000117269 6972 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Pcdha9Q91Y11 1700003E16Rik-202ENSMUST00000203203 2070 ntTSL 2 BASIC19.36■□□□□ 0.69
Pcdha9Q91Y11 Bsg-202ENSMUST00000105381 1240 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Pcdha9Q91Y11 Cracr2b-207ENSMUST00000170879 1158 ntAPPRIS ALT2 TSL 5 BASIC19.36■□□□□ 0.69
Pcdha9Q91Y11 Tspan2-203ENSMUST00000196611 682 ntTSL 5 BASIC19.36■□□□□ 0.69
Retrieved 100 of 76,532 protein–RNA pairs in 15.9 ms