Protein–RNA interactions for Protein: Q91XZ2

Pcdhb8, Protocadherin beta-8, mousemouse

Predictions only

Length 779 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb8Q91XZ2 Mtmr1-202ENSMUST00000114601 4640 ntAPPRIS ALT2 TSL 5 BASIC17.82■□□□□ 0.44
Pcdhb8Q91XZ2 Arrb2-204ENSMUST00000102564 1848 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Pcdhb8Q91XZ2 Tuba3b-201ENSMUST00000087445 1775 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Pcdhb8Q91XZ2 Fbxo47-201ENSMUST00000093939 2162 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Pcdhb8Q91XZ2 Knstrn-202ENSMUST00000110842 925 ntAPPRIS ALT2 TSL 3 BASIC17.82■□□□□ 0.44
Pcdhb8Q91XZ2 AI507597-201ENSMUST00000140726 880 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Pcdhb8Q91XZ2 Nt5c-201ENSMUST00000021082 858 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Pcdhb8Q91XZ2 Erh-205ENSMUST00000218740 981 ntTSL 2 BASIC17.82■□□□□ 0.44
Pcdhb8Q91XZ2 AC107452.1-201ENSMUST00000227963 481 ntBASIC17.82■□□□□ 0.44
Pcdhb8Q91XZ2 Med30-201ENSMUST00000037115 1007 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Pcdhb8Q91XZ2 Cfap36-201ENSMUST00000020754 1664 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Pcdhb8Q91XZ2 Dixdc1-207ENSMUST00000121634 2420 ntTSL 5 BASIC17.82■□□□□ 0.44
Pcdhb8Q91XZ2 Ythdc1-202ENSMUST00000119339 3222 ntAPPRIS ALT2 TSL 5 BASIC17.82■□□□□ 0.44
Pcdhb8Q91XZ2 Lats2-201ENSMUST00000022531 5191 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Pcdhb8Q91XZ2 Chmp6-201ENSMUST00000026434 1557 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Pcdhb8Q91XZ2 2310022A10Rik-201ENSMUST00000067386 2701 ntAPPRIS P2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Pcdhb8Q91XZ2 Smox-209ENSMUST00000110189 1919 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Pcdhb8Q91XZ2 Klhdc1-201ENSMUST00000063445 2620 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Pcdhb8Q91XZ2 Zfp282-201ENSMUST00000061890 5573 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Pcdhb8Q91XZ2 Caskin1-201ENSMUST00000024958 6172 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
Pcdhb8Q91XZ2 Igsf9b-201ENSMUST00000115247 2857 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Pcdhb8Q91XZ2 Gpr162-204ENSMUST00000204667 2855 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Pcdhb8Q91XZ2 Galk1-201ENSMUST00000021114 1406 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Pcdhb8Q91XZ2 4930447C04Rik-201ENSMUST00000044000 2051 ntAPPRIS P2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Pcdhb8Q91XZ2 Gdf1-201ENSMUST00000207684 1349 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Pcdhb8Q91XZ2 Tesk1-201ENSMUST00000060864 3947 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Pcdhb8Q91XZ2 Anks1b-208ENSMUST00000182053 1649 ntTSL 5 BASIC17.81■□□□□ 0.44
Pcdhb8Q91XZ2 Lhpp-202ENSMUST00000106170 999 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Pcdhb8Q91XZ2 Kcnd3os-201ENSMUST00000130683 1091 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Pcdhb8Q91XZ2 Gm18284-201ENSMUST00000172604 624 ntBASIC17.81■□□□□ 0.44
Pcdhb8Q91XZ2 Phox2b-202ENSMUST00000174251 1177 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Pcdhb8Q91XZ2 Yjefn3-203ENSMUST00000180068 629 ntTSL 5 BASIC17.81■□□□□ 0.44
Pcdhb8Q91XZ2 AC142113.1-201ENSMUST00000214931 801 ntTSL 5 BASIC17.81■□□□□ 0.44
Pcdhb8Q91XZ2 AC160393.1-201ENSMUST00000218378 1279 ntBASIC17.81■□□□□ 0.44
Pcdhb8Q91XZ2 Gpr3-201ENSMUST00000052090 1116 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Pcdhb8Q91XZ2 Klhl25-201ENSMUST00000092073 3385 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Pcdhb8Q91XZ2 Tmem39b-201ENSMUST00000102588 1810 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Pcdhb8Q91XZ2 Ism1-201ENSMUST00000099307 2944 ntTSL 5 BASIC17.81■□□□□ 0.44
Pcdhb8Q91XZ2 Mgme1-203ENSMUST00000110028 2308 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Pcdhb8Q91XZ2 AC123834.2-201ENSMUST00000224038 2340 ntBASIC17.81■□□□□ 0.44
Pcdhb8Q91XZ2 Il4i1-201ENSMUST00000033015 2048 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
Pcdhb8Q91XZ2 Lrrc75b-201ENSMUST00000051129 4601 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Pcdhb8Q91XZ2 Ppp1cb-201ENSMUST00000015100 5962 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Pcdhb8Q91XZ2 AV356131-201ENSMUST00000206201 750 ntBASIC17.8■□□□□ 0.44
Pcdhb8Q91XZ2 Rasl10a-201ENSMUST00000037218 1110 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Pcdhb8Q91XZ2 Dennd6a-201ENSMUST00000037585 6638 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Pcdhb8Q91XZ2 Eif4g3-201ENSMUST00000058133 2663 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Pcdhb8Q91XZ2 Zfp78-205ENSMUST00000208030 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Pcdhb8Q91XZ2 Laptm4b-201ENSMUST00000022867 1902 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Pcdhb8Q91XZ2 Akp3-201ENSMUST00000044878 1680 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Pcdhb8Q91XZ2 Gm9194-201ENSMUST00000220749 1447 ntBASIC17.8■□□□□ 0.44
Pcdhb8Q91XZ2 Plekhg3-201ENSMUST00000075249 5138 ntAPPRIS P2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Pcdhb8Q91XZ2 Runx2-204ENSMUST00000159943 2316 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
Pcdhb8Q91XZ2 Atg16l2-202ENSMUST00000122116 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Pcdhb8Q91XZ2 Tspan5-201ENSMUST00000029800 6653 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Pcdhb8Q91XZ2 Cirbp-202ENSMUST00000105365 1321 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Pcdhb8Q91XZ2 Gadd45b-201ENSMUST00000015456 1284 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Pcdhb8Q91XZ2 Znrf4-201ENSMUST00000052211 1236 ntAPPRIS P1 BASIC17.79■□□□□ 0.44
Pcdhb8Q91XZ2 Zbtb8a-201ENSMUST00000030610 2321 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Pcdhb8Q91XZ2 Sema3c-201ENSMUST00000030568 5491 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Pcdhb8Q91XZ2 Cyth2-202ENSMUST00000107729 2519 ntAPPRIS P2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Pcdhb8Q91XZ2 Nmnat3-202ENSMUST00000112937 1898 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Pcdhb8Q91XZ2 Gm45447-201ENSMUST00000209874 1805 ntTSL 5 BASIC17.79■□□□□ 0.44
Pcdhb8Q91XZ2 Schip1-201ENSMUST00000029346 2201 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Pcdhb8Q91XZ2 Khsrp-201ENSMUST00000007814 3990 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Pcdhb8Q91XZ2 Cckbr-201ENSMUST00000033189 2573 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Pcdhb8Q91XZ2 Tial1-201ENSMUST00000033135 1580 ntAPPRIS ALT1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Pcdhb8Q91XZ2 Prmt6-201ENSMUST00000106567 2450 ntAPPRIS P1 BASIC17.78■□□□□ 0.44
Pcdhb8Q91XZ2 Rragd-203ENSMUST00000098190 5008 ntAPPRIS P1 TSL 2 BASIC17.78■□□□□ 0.44
Pcdhb8Q91XZ2 Grk6-201ENSMUST00000001115 2994 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Pcdhb8Q91XZ2 Sorcs2-201ENSMUST00000037370 5707 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Pcdhb8Q91XZ2 1810043G02Rik-201ENSMUST00000105397 1818 ntAPPRIS P2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Pcdhb8Q91XZ2 Tmem54-203ENSMUST00000106064 1066 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
Pcdhb8Q91XZ2 Foxi3-202ENSMUST00000163089 1278 ntAPPRIS ALT2 TSL 5 BASIC17.78■□□□□ 0.44
Pcdhb8Q91XZ2 Specc1-215ENSMUST00000202744 674 ntTSL 3 BASIC17.78■□□□□ 0.44
Pcdhb8Q91XZ2 Foxi3-201ENSMUST00000069634 1206 ntAPPRIS P2 TSL 5 BASIC17.78■□□□□ 0.44
Pcdhb8Q91XZ2 A730056A06Rik-201ENSMUST00000181299 2689 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Pcdhb8Q91XZ2 Mrgprf-202ENSMUST00000117718 1935 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Pcdhb8Q91XZ2 Exog-202ENSMUST00000164213 2627 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Pcdhb8Q91XZ2 Sh3bp1-202ENSMUST00000061239 1917 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Pcdhb8Q91XZ2 Gm45141-201ENSMUST00000206502 1888 ntBASIC17.78■□□□□ 0.44
Pcdhb8Q91XZ2 St7l-201ENSMUST00000059271 5728 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.44
Pcdhb8Q91XZ2 Htr7-201ENSMUST00000099505 1606 ntTSL 5 BASIC17.77■□□□□ 0.44
Pcdhb8Q91XZ2 Gpx4-202ENSMUST00000105372 959 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Pcdhb8Q91XZ2 1700125G02Rik-201ENSMUST00000154947 519 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Pcdhb8Q91XZ2 Mpig6b-202ENSMUST00000174190 729 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Pcdhb8Q91XZ2 Snrpc-201ENSMUST00000071006 870 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Pcdhb8Q91XZ2 Prdm8-202ENSMUST00000210477 3316 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.44
Pcdhb8Q91XZ2 Mrpl10-201ENSMUST00000001485 1708 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Pcdhb8Q91XZ2 Foxp1-230ENSMUST00000177437 2468 ntAPPRIS P2 TSL 1 (best) BASIC17.77■□□□□ 0.43
Pcdhb8Q91XZ2 Fam213a-201ENSMUST00000022317 1537 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.43
Pcdhb8Q91XZ2 St8sia5-202ENSMUST00000079618 1989 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Pcdhb8Q91XZ2 Pip5k1c-202ENSMUST00000105327 2551 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.43
Pcdhb8Q91XZ2 Ppfia1-201ENSMUST00000168134 5181 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
Pcdhb8Q91XZ2 Nkd1-203ENSMUST00000211113 1474 ntTSL 5 BASIC17.76■□□□□ 0.43
Pcdhb8Q91XZ2 Snap91-201ENSMUST00000036347 4237 ntAPPRIS ALT2 TSL 5 BASIC17.76■□□□□ 0.43
Pcdhb8Q91XZ2 Cebpg-202ENSMUST00000130491 4709 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Pcdhb8Q91XZ2 Dynll2-202ENSMUST00000107923 2443 ntAPPRIS P1 TSL 3 BASIC17.76■□□□□ 0.43
Pcdhb8Q91XZ2 Cd47-201ENSMUST00000084838 5277 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Pcdhb8Q91XZ2 Gm39115-201ENSMUST00000211350 699 ntAPPRIS P1 BASIC17.76■□□□□ 0.43
Retrieved 100 of 76,532 protein–RNA pairs in 28.5 ms