Protein–RNA interactions for Protein: Q91XX9

Pcdhga9, Protocadherin gamma A9, mousemouse

Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhga9Q91XX9 Snx12-204ENSMUST00000156473 1114 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
Pcdhga9Q91XX9 Gm10153-202ENSMUST00000210290 963 ntAPPRIS P1 BASIC18.08■□□□□ 0.48
Pcdhga9Q91XX9 Gm40460-201ENSMUST00000211591 735 ntAPPRIS P1 BASIC18.08■□□□□ 0.48
Pcdhga9Q91XX9 Smarcc1-207ENSMUST00000199896 5773 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.48
Pcdhga9Q91XX9 Negr1-202ENSMUST00000074015 4983 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Pcdhga9Q91XX9 Phldb3-204ENSMUST00000206422 2564 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.48
Pcdhga9Q91XX9 Tal1-204ENSMUST00000162489 2894 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Pcdhga9Q91XX9 Adgra2-201ENSMUST00000033876 5760 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Pcdhga9Q91XX9 Hgsnat-201ENSMUST00000037609 2694 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Pcdhga9Q91XX9 Kat14-201ENSMUST00000028911 3801 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Pcdhga9Q91XX9 Prkci-201ENSMUST00000108249 4708 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Pcdhga9Q91XX9 Gm12527-201ENSMUST00000117967 564 ntBASIC18.07■□□□□ 0.48
Pcdhga9Q91XX9 Josd2-204ENSMUST00000118628 864 ntAPPRIS P1 TSL 2 BASIC18.07■□□□□ 0.48
Pcdhga9Q91XX9 Josd2-201ENSMUST00000035844 930 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Pcdhga9Q91XX9 Gm10065-201ENSMUST00000076238 345 ntAPPRIS P1 BASIC18.07■□□□□ 0.48
Pcdhga9Q91XX9 Ttc32-201ENSMUST00000085741 1000 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Pcdhga9Q91XX9 Rbmxl1-202ENSMUST00000211719 1622 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Pcdhga9Q91XX9 Fzd2-201ENSMUST00000057893 3663 ntAPPRIS P1 BASIC18.07■□□□□ 0.48
Pcdhga9Q91XX9 Lrch2-201ENSMUST00000112819 4892 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
Pcdhga9Q91XX9 Irgq-201ENSMUST00000049020 6083 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Pcdhga9Q91XX9 Syde1-201ENSMUST00000040580 3288 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Pcdhga9Q91XX9 Galnt16-204ENSMUST00000218943 2047 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Pcdhga9Q91XX9 Mgea5-201ENSMUST00000026243 5024 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Pcdhga9Q91XX9 Akp3-201ENSMUST00000044878 1680 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Pcdhga9Q91XX9 Actrt3-201ENSMUST00000047630 1961 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Pcdhga9Q91XX9 Myo1b-203ENSMUST00000114537 4618 ntTSL 5 BASIC18.06■□□□□ 0.48
Pcdhga9Q91XX9 Gm13509-201ENSMUST00000119733 1308 ntBASIC18.06■□□□□ 0.48
Pcdhga9Q91XX9 Enah-203ENSMUST00000111025 3385 ntAPPRIS ALT2 TSL 5 BASIC18.06■□□□□ 0.48
Pcdhga9Q91XX9 Rpl26-202ENSMUST00000101014 657 ntAPPRIS ALT1 TSL 5 BASIC18.06■□□□□ 0.48
Pcdhga9Q91XX9 Hist1h4c-201ENSMUST00000102967 820 ntAPPRIS P1 BASIC18.06■□□□□ 0.48
Pcdhga9Q91XX9 Tspan2os-201ENSMUST00000146624 590 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Pcdhga9Q91XX9 Cacna2d1-207ENSMUST00000196750 1272 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Pcdhga9Q91XX9 1810059H22Rik-205ENSMUST00000204570 690 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Pcdhga9Q91XX9 Cck-204ENSMUST00000216138 799 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Pcdhga9Q91XX9 AC107452.1-201ENSMUST00000227963 481 ntBASIC18.06■□□□□ 0.48
Pcdhga9Q91XX9 1110004E09Rik-201ENSMUST00000023694 1143 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Pcdhga9Q91XX9 Tmem54-201ENSMUST00000030575 1064 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Pcdhga9Q91XX9 Pstk-201ENSMUST00000075610 1135 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Pcdhga9Q91XX9 Selenom-201ENSMUST00000094469 707 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Pcdhga9Q91XX9 Aup1-201ENSMUST00000092618 1769 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Pcdhga9Q91XX9 Pwwp2b-201ENSMUST00000093993 3057 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Pcdhga9Q91XX9 Notch4-201ENSMUST00000015612 6591 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Pcdhga9Q91XX9 Atad2b-201ENSMUST00000045664 8035 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
Pcdhga9Q91XX9 Trim67-201ENSMUST00000041106 5694 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Pcdhga9Q91XX9 Aamp-201ENSMUST00000006462 1817 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
Pcdhga9Q91XX9 Scaf8-201ENSMUST00000076734 4869 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Pcdhga9Q91XX9 Six3os1-206ENSMUST00000175921 2737 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Pcdhga9Q91XX9 Spc25-202ENSMUST00000112320 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
Pcdhga9Q91XX9 Snapc2-201ENSMUST00000011981 1536 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Pcdhga9Q91XX9 Rab3ip-201ENSMUST00000020375 2690 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Pcdhga9Q91XX9 2610035F20Rik-202ENSMUST00000177306 1149 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Pcdhga9Q91XX9 Nptxr-201ENSMUST00000023057 5004 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
Pcdhga9Q91XX9 Trabd-206ENSMUST00000169891 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
Pcdhga9Q91XX9 Kcnk3-201ENSMUST00000066295 3811 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Pcdhga9Q91XX9 Cep57-209ENSMUST00000148086 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
Pcdhga9Q91XX9 Fgf23-201ENSMUST00000000186 1814 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Pcdhga9Q91XX9 Gfra3-201ENSMUST00000025224 1992 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Pcdhga9Q91XX9 Snrnp70-201ENSMUST00000074575 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Pcdhga9Q91XX9 Patz1-203ENSMUST00000094471 2930 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Pcdhga9Q91XX9 Fbxo30-201ENSMUST00000070300 2492 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Pcdhga9Q91XX9 Rfx7-201ENSMUST00000093820 7988 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
Pcdhga9Q91XX9 Vkorc1-202ENSMUST00000119922 387 ntTSL 3 BASIC18.04■□□□□ 0.48
Pcdhga9Q91XX9 Lypla1-208ENSMUST00000150971 877 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Pcdhga9Q91XX9 Ago4-201ENSMUST00000084289 6537 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Pcdhga9Q91XX9 Arrb2-204ENSMUST00000102564 1848 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Pcdhga9Q91XX9 Epc2-201ENSMUST00000092123 4697 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Pcdhga9Q91XX9 Trim58-201ENSMUST00000075084 2192 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Pcdhga9Q91XX9 2810474O19Rik-201ENSMUST00000046689 6066 ntAPPRIS P2 TSL 1 (best) BASIC18.04■□□□□ 0.48
Pcdhga9Q91XX9 Gm5112-201ENSMUST00000204407 2368 ntBASIC18.03■□□□□ 0.48
Pcdhga9Q91XX9 Fam118a-201ENSMUST00000023069 2543 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Pcdhga9Q91XX9 4930518J20Rik-201ENSMUST00000195064 1478 ntBASIC18.03■□□□□ 0.48
Pcdhga9Q91XX9 Gm11627-202ENSMUST00000107081 818 ntAPPRIS P1 TSL 2 BASIC18.03■□□□□ 0.48
Pcdhga9Q91XX9 Kmt5b-204ENSMUST00000113970 2975 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
Pcdhga9Q91XX9 Gm12473-201ENSMUST00000137535 579 ntTSL 5 BASIC18.03■□□□□ 0.48
Pcdhga9Q91XX9 Gm22240-201ENSMUST00000175225 82 ntBASIC18.03■□□□□ 0.48
Pcdhga9Q91XX9 Unc13a-208ENSMUST00000177517 5654 ntAPPRIS ALT2 TSL 5 BASIC18.03■□□□□ 0.48
Pcdhga9Q91XX9 Nck2-201ENSMUST00000086421 2772 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Pcdhga9Q91XX9 Gm9194-201ENSMUST00000220749 1447 ntBASIC18.03■□□□□ 0.48
Pcdhga9Q91XX9 Olig2-201ENSMUST00000035608 2437 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Pcdhga9Q91XX9 Mafg-201ENSMUST00000058162 4923 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Pcdhga9Q91XX9 Rap1b-201ENSMUST00000064667 2724 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Pcdhga9Q91XX9 Map4k4-201ENSMUST00000163854 5782 ntAPPRIS ALT2 TSL 5 BASIC18.03■□□□□ 0.48
Pcdhga9Q91XX9 Wdr20-205ENSMUST00000193053 1351 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Pcdhga9Q91XX9 Fbxo47-201ENSMUST00000093939 2162 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Pcdhga9Q91XX9 Nectin3-201ENSMUST00000023334 3062 ntAPPRIS P4 TSL 1 (best) BASIC18.02■□□□□ 0.48
Pcdhga9Q91XX9 Gm22325-201ENSMUST00000158904 308 ntBASIC18.02■□□□□ 0.48
Pcdhga9Q91XX9 C430014B12Rik-202ENSMUST00000186858 657 ntTSL 2 BASIC18.02■□□□□ 0.48
Pcdhga9Q91XX9 2900042K21Rik-201ENSMUST00000194444 653 ntBASIC18.02■□□□□ 0.48
Pcdhga9Q91XX9 Thoc3-201ENSMUST00000026990 2335 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Pcdhga9Q91XX9 Klhl36-201ENSMUST00000034287 2181 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Pcdhga9Q91XX9 Tagln-201ENSMUST00000034590 1595 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Pcdhga9Q91XX9 Gm37563-201ENSMUST00000192580 1513 ntBASIC18.02■□□□□ 0.47
Pcdhga9Q91XX9 Anapc5-208ENSMUST00000197719 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.47
Pcdhga9Q91XX9 S1pr4-201ENSMUST00000053646 2386 ntAPPRIS P1 BASIC18.02■□□□□ 0.47
Pcdhga9Q91XX9 Syndig1-202ENSMUST00000109935 2050 ntAPPRIS P1 TSL 5 BASIC18.02■□□□□ 0.47
Pcdhga9Q91XX9 Mrps23-203ENSMUST00000118784 1404 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Pcdhga9Q91XX9 Arl6ip4-202ENSMUST00000122394 982 ntAPPRIS ALT2 TSL 5 BASIC18.01■□□□□ 0.47
Pcdhga9Q91XX9 Gm8520-201ENSMUST00000186517 868 ntBASIC18.01■□□□□ 0.47
Pcdhga9Q91XX9 Gm42922-201ENSMUST00000195887 2078 ntBASIC18.01■□□□□ 0.47
Pcdhga9Q91XX9 Rimklb-201ENSMUST00000068242 4725 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Retrieved 100 of 76,532 protein–RNA pairs in 34.8 ms