Protein–RNA interactions for Protein: Q91XX8

Pcdhgb1, Protocadherin gamma B1, mousemouse

Predictions only

Length 918 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhgb1Q91XX8 Gm10409-201ENSMUST00000170123 1933 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Pcdhgb1Q91XX8 Tifa-201ENSMUST00000054483 2245 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Pcdhgb1Q91XX8 Pqlc1-207ENSMUST00000140594 2356 ntAPPRIS P3 TSL 1 (best) BASIC18.96■□□□□ 0.63
Pcdhgb1Q91XX8 Mplkip-201ENSMUST00000049744 2672 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Pcdhgb1Q91XX8 Ssx2ip-204ENSMUST00000106153 3446 ntAPPRIS P3 TSL 1 (best) BASIC18.96■□□□□ 0.63
Pcdhgb1Q91XX8 Sox10-201ENSMUST00000040019 2713 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Pcdhgb1Q91XX8 Gabarapl1-201ENSMUST00000032264 1820 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Pcdhgb1Q91XX8 Arrb2-203ENSMUST00000102563 1352 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Pcdhgb1Q91XX8 Eml4-203ENSMUST00000112363 5238 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
Pcdhgb1Q91XX8 Cyp2u1-203ENSMUST00000200236 1716 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Pcdhgb1Q91XX8 Larp1-203ENSMUST00000178636 6617 ntAPPRIS P2 TSL 5 BASIC18.95■□□□□ 0.62
Pcdhgb1Q91XX8 Kcnip2-209ENSMUST00000162528 2395 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Pcdhgb1Q91XX8 Icam2-201ENSMUST00000001055 1282 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Pcdhgb1Q91XX8 Gm15847-201ENSMUST00000121417 1065 ntBASIC18.95■□□□□ 0.62
Pcdhgb1Q91XX8 Crybb1-201ENSMUST00000031286 882 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Pcdhgb1Q91XX8 Mfsd10-201ENSMUST00000001109 1907 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Pcdhgb1Q91XX8 Gm26694-201ENSMUST00000180868 1902 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Pcdhgb1Q91XX8 Adcy3-202ENSMUST00000124505 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Pcdhgb1Q91XX8 Nlgn2-201ENSMUST00000056484 5003 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Pcdhgb1Q91XX8 Tpra1-201ENSMUST00000055022 1820 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Pcdhgb1Q91XX8 Sae1-204ENSMUST00000211741 1663 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Pcdhgb1Q91XX8 Podxl-201ENSMUST00000026698 5379 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Pcdhgb1Q91XX8 Smap2-201ENSMUST00000043200 2905 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Pcdhgb1Q91XX8 Gm4737-201ENSMUST00000059524 2093 ntAPPRIS P1 BASIC18.94■□□□□ 0.62
Pcdhgb1Q91XX8 Zyg11a-202ENSMUST00000106690 2421 ntAPPRIS ALT2 TSL 5 BASIC18.94■□□□□ 0.62
Pcdhgb1Q91XX8 Dtx4-201ENSMUST00000045521 5765 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Pcdhgb1Q91XX8 Alg1-202ENSMUST00000100196 1755 ntAPPRIS P2 TSL 1 (best) BASIC18.94■□□□□ 0.62
Pcdhgb1Q91XX8 Ndfip2-206ENSMUST00000181969 2532 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Pcdhgb1Q91XX8 Cfl1-201ENSMUST00000116560 1148 ntTSL 5 BASIC18.94■□□□□ 0.62
Pcdhgb1Q91XX8 Gm15556-201ENSMUST00000122904 663 ntTSL 5 BASIC18.94■□□□□ 0.62
Pcdhgb1Q91XX8 Eloc-203ENSMUST00000185771 742 ntAPPRIS P1 TSL 5 BASIC18.94■□□□□ 0.62
Pcdhgb1Q91XX8 Gm44965-201ENSMUST00000204121 360 ntAPPRIS P1 TSL 3 BASIC18.94■□□□□ 0.62
Pcdhgb1Q91XX8 Mboat4-201ENSMUST00000095345 1836 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Pcdhgb1Q91XX8 Gm29430-202ENSMUST00000191453 2015 ntTSL 5 BASIC18.94■□□□□ 0.62
Pcdhgb1Q91XX8 Purb-201ENSMUST00000179343 8319 ntAPPRIS P1 BASIC18.94■□□□□ 0.62
Pcdhgb1Q91XX8 Cachd1-201ENSMUST00000030257 5765 ntAPPRIS P2 TSL 1 (best) BASIC18.94■□□□□ 0.62
Pcdhgb1Q91XX8 Lrrc36-202ENSMUST00000109355 2411 ntAPPRIS P2 TSL 5 BASIC18.94■□□□□ 0.62
Pcdhgb1Q91XX8 Chd5-205ENSMUST00000164662 9375 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
Pcdhgb1Q91XX8 Gm21596-201ENSMUST00000178049 1316 ntBASIC18.94■□□□□ 0.62
Pcdhgb1Q91XX8 Lrg1-201ENSMUST00000041357 1351 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Pcdhgb1Q91XX8 Tmem185a-201ENSMUST00000101506 2429 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Pcdhgb1Q91XX8 Pcnp-202ENSMUST00000114444 2295 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Pcdhgb1Q91XX8 Cdkl3-206ENSMUST00000109079 2051 ntAPPRIS ALT2 TSL 5 BASIC18.93■□□□□ 0.62
Pcdhgb1Q91XX8 Cdkl3-208ENSMUST00000109081 2063 ntAPPRIS ALT2 TSL 5 BASIC18.93■□□□□ 0.62
Pcdhgb1Q91XX8 A530010L16Rik-201ENSMUST00000212007 2336 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Pcdhgb1Q91XX8 Ssu72-202ENSMUST00000105595 874 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Pcdhgb1Q91XX8 Gm17098-201ENSMUST00000166507 628 ntTSL 5 BASIC18.93■□□□□ 0.62
Pcdhgb1Q91XX8 Rtl8a-201ENSMUST00000088779 1195 ntAPPRIS P1 BASIC18.93■□□□□ 0.62
Pcdhgb1Q91XX8 Rncr4-201ENSMUST00000194541 2234 ntBASIC18.93■□□□□ 0.62
Pcdhgb1Q91XX8 Phldb3-204ENSMUST00000206422 2564 ntAPPRIS P1 TSL 5 BASIC18.92■□□□□ 0.62
Pcdhgb1Q91XX8 Polr3gl-201ENSMUST00000091924 1427 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Pcdhgb1Q91XX8 Fmnl2-201ENSMUST00000049483 5461 ntTSL 5 BASIC18.92■□□□□ 0.62
Pcdhgb1Q91XX8 Fam117b-201ENSMUST00000036540 5532 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Pcdhgb1Q91XX8 Tmem44-204ENSMUST00000140402 2405 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Pcdhgb1Q91XX8 Gm43231-201ENSMUST00000202960 2258 ntBASIC18.92■□□□□ 0.62
Pcdhgb1Q91XX8 Lrrc43-203ENSMUST00000196809 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
Pcdhgb1Q91XX8 Fam213a-201ENSMUST00000022317 1537 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
Pcdhgb1Q91XX8 1110065P20Rik-203ENSMUST00000137769 659 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Pcdhgb1Q91XX8 Mvb12a-201ENSMUST00000034272 1062 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Pcdhgb1Q91XX8 Hsbp1-201ENSMUST00000034300 1208 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Pcdhgb1Q91XX8 Wdsub1-201ENSMUST00000028368 2072 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Pcdhgb1Q91XX8 Pgs1-203ENSMUST00000132676 2863 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Pcdhgb1Q91XX8 Rrp9-201ENSMUST00000047721 1586 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Pcdhgb1Q91XX8 Wbp1-202ENSMUST00000113936 1314 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Pcdhgb1Q91XX8 Kcnb1-201ENSMUST00000059826 4015 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Pcdhgb1Q91XX8 Cbln2-202ENSMUST00000122079 2549 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Pcdhgb1Q91XX8 Grk2-202ENSMUST00000088737 3376 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Pcdhgb1Q91XX8 Gpr137-202ENSMUST00000099774 1434 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Pcdhgb1Q91XX8 Vstm2b-203ENSMUST00000205845 1455 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Pcdhgb1Q91XX8 Dynll2-204ENSMUST00000178105 2187 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Pcdhgb1Q91XX8 Pdp1-206ENSMUST00000108302 2525 ntTSL 3 BASIC18.91■□□□□ 0.62
Pcdhgb1Q91XX8 Dkk4-201ENSMUST00000033936 1315 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Pcdhgb1Q91XX8 Hpca-202ENSMUST00000095807 1666 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Pcdhgb1Q91XX8 Tymp-201ENSMUST00000023285 2037 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Pcdhgb1Q91XX8 Actl6a-201ENSMUST00000029214 2010 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Pcdhgb1Q91XX8 Gabarap-201ENSMUST00000018711 1351 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Pcdhgb1Q91XX8 Prdm8-201ENSMUST00000112959 4553 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Pcdhgb1Q91XX8 Socs6-203ENSMUST00000125362 2814 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Pcdhgb1Q91XX8 Cbx6-203ENSMUST00000109627 5806 ntAPPRIS P2 TSL 1 (best) BASIC18.91■□□□□ 0.62
Pcdhgb1Q91XX8 Ccdc3-201ENSMUST00000027988 2670 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Pcdhgb1Q91XX8 2700033N17Rik-201ENSMUST00000140185 721 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Pcdhgb1Q91XX8 Ube2s-201ENSMUST00000079496 1238 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Pcdhgb1Q91XX8 Prr29-201ENSMUST00000009354 1112 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Pcdhgb1Q91XX8 Hmga1-202ENSMUST00000117254 1328 ntAPPRIS P3 TSL 2 BASIC18.9■□□□□ 0.62
Pcdhgb1Q91XX8 Zmynd10-201ENSMUST00000010188 1765 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Pcdhgb1Q91XX8 Arhgap23-203ENSMUST00000121799 5816 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
Pcdhgb1Q91XX8 Dbr1-201ENSMUST00000066650 2261 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Pcdhgb1Q91XX8 Paqr3-201ENSMUST00000069453 1375 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Pcdhgb1Q91XX8 P2rx4-202ENSMUST00000081554 1887 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Pcdhgb1Q91XX8 Acvr1-201ENSMUST00000056376 2394 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Pcdhgb1Q91XX8 Rusc2-201ENSMUST00000035645 5300 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Pcdhgb1Q91XX8 Rbm18-201ENSMUST00000028251 2617 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
Pcdhgb1Q91XX8 Ica1-203ENSMUST00000115519 1706 ntAPPRIS ALT2 TSL 5 BASIC18.89■□□□□ 0.61
Pcdhgb1Q91XX8 Tgif1-209ENSMUST00000166395 1714 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Pcdhgb1Q91XX8 Lrch3-208ENSMUST00000165616 1875 ntTSL 5 BASIC18.89■□□□□ 0.61
Pcdhgb1Q91XX8 Gm13181-201ENSMUST00000120117 1069 ntBASIC18.89■□□□□ 0.61
Pcdhgb1Q91XX8 Serf1-204ENSMUST00000151821 570 ntTSL 2 BASIC18.89■□□□□ 0.61
Pcdhgb1Q91XX8 Rrs1-201ENSMUST00000072079 2048 ntAPPRIS P1 BASIC18.89■□□□□ 0.61
Pcdhgb1Q91XX8 Gm19531-201ENSMUST00000216737 1377 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Pcdhgb1Q91XX8 Mark2-203ENSMUST00000051711 2867 ntAPPRIS P4 TSL 1 (best) BASIC18.89■□□□□ 0.61
Retrieved 100 of 76,532 protein–RNA pairs in 29.9 ms