Protein–RNA interactions for Protein: Q91XX6

Pcdhgb4, Protocadherin gamma B4, mousemouse

Predictions only

Length 912 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhgb4Q91XX6 Zfp444-202ENSMUST00000108565 849 ntTSL 3 BASIC19.31■□□□□ 0.68
Pcdhgb4Q91XX6 Magi3-203ENSMUST00000122303 3827 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
Pcdhgb4Q91XX6 Gm38165-201ENSMUST00000191654 486 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Pcdhgb4Q91XX6 Specc1-215ENSMUST00000202744 674 ntTSL 3 BASIC19.31■□□□□ 0.68
Pcdhgb4Q91XX6 Ppp1r3f-201ENSMUST00000115742 3066 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
Pcdhgb4Q91XX6 Tfeb-203ENSMUST00000113284 1974 ntTSL 5 BASIC19.31■□□□□ 0.68
Pcdhgb4Q91XX6 Acvr2b-205ENSMUST00000215746 3175 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Pcdhgb4Q91XX6 Rab7-202ENSMUST00000113596 1657 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Pcdhgb4Q91XX6 Dtnb-222ENSMUST00000174479 3689 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Pcdhgb4Q91XX6 Fndc4-202ENSMUST00000172435 2333 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Pcdhgb4Q91XX6 Lrrc57-204ENSMUST00000102499 1961 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Pcdhgb4Q91XX6 Nkd1-203ENSMUST00000211113 1474 ntTSL 5 BASIC19.3■□□□□ 0.68
Pcdhgb4Q91XX6 Stac2-201ENSMUST00000017544 3050 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Pcdhgb4Q91XX6 Yjefn3-203ENSMUST00000180068 629 ntTSL 5 BASIC19.3■□□□□ 0.68
Pcdhgb4Q91XX6 AV356131-201ENSMUST00000206201 750 ntBASIC19.3■□□□□ 0.68
Pcdhgb4Q91XX6 AC142113.1-201ENSMUST00000214931 801 ntTSL 5 BASIC19.3■□□□□ 0.68
Pcdhgb4Q91XX6 Erh-205ENSMUST00000218740 981 ntTSL 2 BASIC19.3■□□□□ 0.68
Pcdhgb4Q91XX6 B3gat2-202ENSMUST00000140583 1737 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Pcdhgb4Q91XX6 Anks1b-217ENSMUST00000182550 1868 ntTSL 5 BASIC19.3■□□□□ 0.68
Pcdhgb4Q91XX6 Ppp1r13b-201ENSMUST00000054815 4389 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Pcdhgb4Q91XX6 Ankle2-202ENSMUST00000086674 5025 ntAPPRIS ALT2 TSL 5 BASIC19.3■□□□□ 0.68
Pcdhgb4Q91XX6 Cbx1-201ENSMUST00000018810 1824 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Pcdhgb4Q91XX6 Zfp382-201ENSMUST00000098596 2117 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Pcdhgb4Q91XX6 Znrf1-205ENSMUST00000172856 4600 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
Pcdhgb4Q91XX6 Srsf11-202ENSMUST00000072875 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Pcdhgb4Q91XX6 Golga7-202ENSMUST00000121783 1945 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Pcdhgb4Q91XX6 Fmnl2-203ENSMUST00000090952 5414 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
Pcdhgb4Q91XX6 Keap1-204ENSMUST00000193982 2163 ntAPPRIS P2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Pcdhgb4Q91XX6 Pkp4-210ENSMUST00000168631 4484 ntAPPRIS ALT1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Pcdhgb4Q91XX6 Gm43672-201ENSMUST00000199072 1731 ntBASIC19.29■□□□□ 0.68
Pcdhgb4Q91XX6 Gm9194-201ENSMUST00000220749 1447 ntBASIC19.29■□□□□ 0.68
Pcdhgb4Q91XX6 Lhpp-202ENSMUST00000106170 999 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Pcdhgb4Q91XX6 Foxi3-202ENSMUST00000163089 1278 ntAPPRIS ALT2 TSL 5 BASIC19.29■□□□□ 0.68
Pcdhgb4Q91XX6 Cst3-201ENSMUST00000028938 860 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Pcdhgb4Q91XX6 Rasl10a-201ENSMUST00000037218 1110 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Pcdhgb4Q91XX6 Foxi3-201ENSMUST00000069634 1206 ntAPPRIS P2 TSL 5 BASIC19.29■□□□□ 0.68
Pcdhgb4Q91XX6 Zfp800-203ENSMUST00000115321 2699 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Pcdhgb4Q91XX6 Gm26884-201ENSMUST00000181207 3074 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Pcdhgb4Q91XX6 Keap1-206ENSMUST00000216436 2498 ntAPPRIS ALT2 TSL 5 BASIC19.29■□□□□ 0.68
Pcdhgb4Q91XX6 Ndufa10-201ENSMUST00000027478 2020 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Pcdhgb4Q91XX6 Map4k4-201ENSMUST00000163854 5782 ntAPPRIS ALT2 TSL 5 BASIC19.29■□□□□ 0.68
Pcdhgb4Q91XX6 Tbc1d2b-202ENSMUST00000128874 3473 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Pcdhgb4Q91XX6 Dlg3-204ENSMUST00000113736 4940 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Pcdhgb4Q91XX6 Fstl3-201ENSMUST00000020575 1955 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Pcdhgb4Q91XX6 Smarcd2-201ENSMUST00000021052 2747 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Pcdhgb4Q91XX6 Ythdc1-202ENSMUST00000119339 3222 ntAPPRIS ALT2 TSL 5 BASIC19.28■□□□□ 0.68
Pcdhgb4Q91XX6 Itsn1-206ENSMUST00000113999 5393 ntTSL 5 BASIC19.28■□□□□ 0.68
Pcdhgb4Q91XX6 Tmem54-203ENSMUST00000106064 1066 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
Pcdhgb4Q91XX6 AC121961.1-201ENSMUST00000218594 1779 ntBASIC19.28■□□□□ 0.68
Pcdhgb4Q91XX6 Ciz1-201ENSMUST00000048964 2771 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
Pcdhgb4Q91XX6 Trim63-202ENSMUST00000105875 1886 ntAPPRIS P2 TSL 5 BASIC19.28■□□□□ 0.68
Pcdhgb4Q91XX6 Fbxw5-201ENSMUST00000015239 2388 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Pcdhgb4Q91XX6 Htr7-201ENSMUST00000099505 1606 ntTSL 5 BASIC19.28■□□□□ 0.68
Pcdhgb4Q91XX6 Rasl10b-202ENSMUST00000108140 3156 ntAPPRIS P1 TSL 2 BASIC19.28■□□□□ 0.68
Pcdhgb4Q91XX6 Rbm11-202ENSMUST00000114249 2750 ntAPPRIS ALT2 TSL 5 BASIC19.27■□□□□ 0.68
Pcdhgb4Q91XX6 Schip1-201ENSMUST00000029346 2201 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Pcdhgb4Q91XX6 Dscam-201ENSMUST00000056102 7498 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Pcdhgb4Q91XX6 Knstrn-202ENSMUST00000110842 925 ntAPPRIS ALT2 TSL 3 BASIC19.27■□□□□ 0.68
Pcdhgb4Q91XX6 Gm18284-201ENSMUST00000172604 624 ntBASIC19.27■□□□□ 0.68
Pcdhgb4Q91XX6 Mpig6b-202ENSMUST00000174190 729 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Pcdhgb4Q91XX6 AC160393.1-201ENSMUST00000218378 1279 ntBASIC19.27■□□□□ 0.68
Pcdhgb4Q91XX6 Gm43182-201ENSMUST00000199476 2528 ntBASIC19.27■□□□□ 0.68
Pcdhgb4Q91XX6 Bmp8a-202ENSMUST00000102641 1917 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.67
Pcdhgb4Q91XX6 Nrxn2-203ENSMUST00000113459 3285 ntTSL 2 BASIC19.27■□□□□ 0.67
Pcdhgb4Q91XX6 Fam213a-201ENSMUST00000022317 1537 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
Pcdhgb4Q91XX6 Hoxa1-202ENSMUST00000120363 2043 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Pcdhgb4Q91XX6 Gadd45b-201ENSMUST00000015456 1284 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Pcdhgb4Q91XX6 Nudt14-201ENSMUST00000002881 734 ntTSL 2 BASIC19.26■□□□□ 0.67
Pcdhgb4Q91XX6 Zfp697-201ENSMUST00000056096 5166 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Pcdhgb4Q91XX6 Pdia6-201ENSMUST00000057288 2175 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Pcdhgb4Q91XX6 Podxl2-202ENSMUST00000061262 2195 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
Pcdhgb4Q91XX6 Nr4a1-201ENSMUST00000023779 2474 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Pcdhgb4Q91XX6 Fez2-201ENSMUST00000070039 1939 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
Pcdhgb4Q91XX6 Camsap3-207ENSMUST00000207712 2539 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Pcdhgb4Q91XX6 Alkbh5-201ENSMUST00000044250 5730 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Pcdhgb4Q91XX6 4930540M05Rik-201ENSMUST00000180527 2068 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Pcdhgb4Q91XX6 Ankrd17-214ENSMUST00000218526 4938 ntTSL 5 BASIC19.25■□□□□ 0.67
Pcdhgb4Q91XX6 Car11-201ENSMUST00000003360 1585 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Pcdhgb4Q91XX6 B4galt5-201ENSMUST00000109221 4210 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Pcdhgb4Q91XX6 Med30-201ENSMUST00000037115 1007 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Pcdhgb4Q91XX6 Gapvd1-201ENSMUST00000028224 5695 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Pcdhgb4Q91XX6 Agbl5-215ENSMUST00000202060 3121 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Pcdhgb4Q91XX6 Dlg1-202ENSMUST00000064477 4663 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
Pcdhgb4Q91XX6 Tmtc1-201ENSMUST00000060095 8383 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Pcdhgb4Q91XX6 Mtmr1-202ENSMUST00000114601 4640 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
Pcdhgb4Q91XX6 Vps9d1-203ENSMUST00000122363 2952 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
Pcdhgb4Q91XX6 Slc9a5-201ENSMUST00000073149 3499 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Pcdhgb4Q91XX6 Mdfic-202ENSMUST00000120512 1871 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Pcdhgb4Q91XX6 Gm15558-201ENSMUST00000126849 2018 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Pcdhgb4Q91XX6 Tmtc1-202ENSMUST00000100772 8269 ntTSL 2 BASIC19.24■□□□□ 0.67
Pcdhgb4Q91XX6 Crlf3-201ENSMUST00000061283 2396 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Pcdhgb4Q91XX6 Ddx39b-203ENSMUST00000173731 2848 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Pcdhgb4Q91XX6 Gm13441-201ENSMUST00000140104 1168 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Pcdhgb4Q91XX6 Fkbp11-201ENSMUST00000003445 731 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Pcdhgb4Q91XX6 Sds-201ENSMUST00000066540 1207 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Pcdhgb4Q91XX6 Akain1-201ENSMUST00000169935 2296 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Pcdhgb4Q91XX6 Dexi-203ENSMUST00000184863 2537 ntAPPRIS P1 TSL 2 BASIC19.24■□□□□ 0.67
Pcdhgb4Q91XX6 Klhl25-201ENSMUST00000092073 3385 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Pcdhgb4Q91XX6 Epn1-207ENSMUST00000208634 2127 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
Pcdhgb4Q91XX6 Dbnl-203ENSMUST00000109845 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Retrieved 100 of 76,532 protein–RNA pairs in 23.7 ms