Protein–RNA interactions for Protein: Q8VEE4

Rpa1, Replication protein A 70 kDa DNA-binding subunit, mousemouse

Known RBP Predictions only

Length 623 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpa1Q8VEE4 Nrxn1-217ENSMUST00000174337 3021 ntTSL 5 BASIC18.36■□□□□ 0.53
Rpa1Q8VEE4 2310034G01Rik-201ENSMUST00000189008 1373 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
Rpa1Q8VEE4 Ikbip-202ENSMUST00000020150 1328 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
Rpa1Q8VEE4 Fgf22-202ENSMUST00000219228 2167 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Rpa1Q8VEE4 Misp-205ENSMUST00000219305 2569 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Rpa1Q8VEE4 Tymp-201ENSMUST00000023285 2037 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Rpa1Q8VEE4 Wbp1-201ENSMUST00000032111 1419 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Rpa1Q8VEE4 Ints8-201ENSMUST00000044616 3433 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Rpa1Q8VEE4 Rnf169-201ENSMUST00000080817 7147 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
Rpa1Q8VEE4 Rxra-201ENSMUST00000077257 4905 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Rpa1Q8VEE4 Msl1-204ENSMUST00000107487 2836 ntAPPRIS ALT2 TSL 2 BASIC18.36■□□□□ 0.53
Rpa1Q8VEE4 Cadm3-201ENSMUST00000005470 2518 ntTSL 5 BASIC18.35■□□□□ 0.53
Rpa1Q8VEE4 Dynll2-202ENSMUST00000107923 2443 ntAPPRIS P1 TSL 3 BASIC18.35■□□□□ 0.53
Rpa1Q8VEE4 Gm45412-201ENSMUST00000210217 2275 ntBASIC18.35■□□□□ 0.53
Rpa1Q8VEE4 Aamp-201ENSMUST00000006462 1817 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
Rpa1Q8VEE4 9430060I03Rik-201ENSMUST00000191563 1689 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Rpa1Q8VEE4 A530084C06Rik-201ENSMUST00000170573 3200 ntAPPRIS P1 BASIC18.35■□□□□ 0.53
Rpa1Q8VEE4 Sstr4-201ENSMUST00000109962 1424 ntAPPRIS P1 BASIC18.35■□□□□ 0.53
Rpa1Q8VEE4 Rbpj-203ENSMUST00000113865 5440 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Rpa1Q8VEE4 Zfp963-202ENSMUST00000154063 640 ntTSL 3 BASIC18.35■□□□□ 0.53
Rpa1Q8VEE4 B930094E09Rik-201ENSMUST00000164667 1240 ntAPPRIS P1 BASIC18.35■□□□□ 0.53
Rpa1Q8VEE4 Dctn3-203ENSMUST00000171641 885 ntTSL 3 BASIC18.35■□□□□ 0.53
Rpa1Q8VEE4 Gm26558-201ENSMUST00000180559 861 ntAPPRIS P1 BASIC18.35■□□□□ 0.53
Rpa1Q8VEE4 Depdc7-201ENSMUST00000028595 1801 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Rpa1Q8VEE4 Dus1l-202ENSMUST00000106133 1762 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
Rpa1Q8VEE4 Tcf7-202ENSMUST00000109071 1742 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Rpa1Q8VEE4 Rragd-201ENSMUST00000029946 5055 ntTSL 5 BASIC18.34■□□□□ 0.53
Rpa1Q8VEE4 Kmt5b-203ENSMUST00000113968 3216 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Rpa1Q8VEE4 Map3k1-201ENSMUST00000109267 6978 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
Rpa1Q8VEE4 Paip2-203ENSMUST00000115735 1521 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
Rpa1Q8VEE4 Rilp-201ENSMUST00000042972 1489 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Rpa1Q8VEE4 Ppp3ca-201ENSMUST00000056758 2194 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Rpa1Q8VEE4 Adrb2-201ENSMUST00000053640 2143 ntAPPRIS P1 BASIC18.34■□□□□ 0.53
Rpa1Q8VEE4 Ntmt1-201ENSMUST00000041830 1387 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Rpa1Q8VEE4 Gm15202-201ENSMUST00000154188 393 ntTSL 3 BASIC18.34■□□□□ 0.53
Rpa1Q8VEE4 Bsg-205ENSMUST00000179781 1261 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Rpa1Q8VEE4 Snx16-203ENSMUST00000195822 1084 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Rpa1Q8VEE4 Golgb1-201ENSMUST00000023534 498 ntBASIC18.34■□□□□ 0.53
Rpa1Q8VEE4 Alad-201ENSMUST00000030090 1206 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Rpa1Q8VEE4 Bag1-201ENSMUST00000030125 1295 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Rpa1Q8VEE4 Hoxb7-201ENSMUST00000049352 1291 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Rpa1Q8VEE4 Scand1-201ENSMUST00000079125 759 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Rpa1Q8VEE4 Ctcf-201ENSMUST00000005841 3782 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Rpa1Q8VEE4 Pacsin1-204ENSMUST00000114873 1857 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Rpa1Q8VEE4 Mrpl15-203ENSMUST00000130201 1894 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Rpa1Q8VEE4 Gm26774-201ENSMUST00000181534 2401 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Rpa1Q8VEE4 Fam109a-201ENSMUST00000056654 2368 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Rpa1Q8VEE4 Ndor1-202ENSMUST00000114349 2336 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Rpa1Q8VEE4 Nsmf-202ENSMUST00000074422 2824 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Rpa1Q8VEE4 Rcn1-201ENSMUST00000006128 2720 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Rpa1Q8VEE4 Trip10-205ENSMUST00000224885 2136 ntAPPRIS ALT2 BASIC18.34■□□□□ 0.53
Rpa1Q8VEE4 Nelfb-201ENSMUST00000059849 2637 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Rpa1Q8VEE4 Gm15558-201ENSMUST00000126849 2018 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
Rpa1Q8VEE4 Man2a2-201ENSMUST00000098346 6554 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Rpa1Q8VEE4 Apbb1-209ENSMUST00000188368 1970 ntTSL 5 BASIC18.33■□□□□ 0.53
Rpa1Q8VEE4 Itsn1-201ENSMUST00000056482 5364 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
Rpa1Q8VEE4 Pea15a-202ENSMUST00000111247 2435 ntTSL 3 BASIC18.33■□□□□ 0.53
Rpa1Q8VEE4 Lrp5-202ENSMUST00000176867 2759 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
Rpa1Q8VEE4 0610010K14Rik-209ENSMUST00000108579 667 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Rpa1Q8VEE4 Hagh-201ENSMUST00000024974 1101 ntAPPRIS ALT1 TSL 5 BASIC18.33■□□□□ 0.52
Rpa1Q8VEE4 Svbp-201ENSMUST00000030395 733 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Rpa1Q8VEE4 Gm9922-201ENSMUST00000066461 435 ntAPPRIS P1 BASIC18.33■□□□□ 0.52
Rpa1Q8VEE4 Taf6l-211ENSMUST00000177056 2006 ntTSL 5 BASIC18.33■□□□□ 0.52
Rpa1Q8VEE4 Dmrt2-201ENSMUST00000053068 2347 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Rpa1Q8VEE4 Mfsd10-201ENSMUST00000001109 1907 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Rpa1Q8VEE4 Pgrmc1-201ENSMUST00000073339 1857 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Rpa1Q8VEE4 Xxylt1-201ENSMUST00000055389 2987 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Rpa1Q8VEE4 Scly-201ENSMUST00000027532 2202 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Rpa1Q8VEE4 Coq10a-201ENSMUST00000043211 1421 ntAPPRIS P2 TSL 5 BASIC18.32■□□□□ 0.52
Rpa1Q8VEE4 Lin7a-203ENSMUST00000218031 1769 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Rpa1Q8VEE4 Tigd3-201ENSMUST00000055911 2114 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Rpa1Q8VEE4 Negr1-201ENSMUST00000041425 2095 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Rpa1Q8VEE4 Pkp4-202ENSMUST00000102754 4614 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
Rpa1Q8VEE4 D030056L22Rik-201ENSMUST00000055792 1631 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Rpa1Q8VEE4 Gm9847-201ENSMUST00000052528 599 ntBASIC18.32■□□□□ 0.52
Rpa1Q8VEE4 Arrb1-210ENSMUST00000179755 7135 ntTSL 5 BASIC18.32■□□□□ 0.52
Rpa1Q8VEE4 Arrb1-202ENSMUST00000098266 7132 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Rpa1Q8VEE4 Gm16897-201ENSMUST00000180780 2492 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Rpa1Q8VEE4 1700123O20Rik-201ENSMUST00000038539 1843 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Rpa1Q8VEE4 Bpifb4-203ENSMUST00000109759 2115 ntAPPRIS P2 TSL 5 BASIC18.32■□□□□ 0.52
Rpa1Q8VEE4 Atp2a2-201ENSMUST00000031423 4486 ntAPPRIS P4 TSL 1 (best) BASIC18.32■□□□□ 0.52
Rpa1Q8VEE4 Nfatc2-205ENSMUST00000137451 2369 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Rpa1Q8VEE4 Gfer-201ENSMUST00000046839 1775 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Rpa1Q8VEE4 Uhmk1-202ENSMUST00000123399 7775 ntTSL 5 BASIC18.31■□□□□ 0.52
Rpa1Q8VEE4 Inpp4a-201ENSMUST00000027287 5691 ntAPPRIS P2 TSL 5 BASIC18.31■□□□□ 0.52
Rpa1Q8VEE4 Slc35f4-204ENSMUST00000138884 1810 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Rpa1Q8VEE4 Scrib-202ENSMUST00000063747 5440 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Rpa1Q8VEE4 Ubxn1-202ENSMUST00000166407 1032 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Rpa1Q8VEE4 Gm9207-201ENSMUST00000198773 1115 ntBASIC18.31■□□□□ 0.52
Rpa1Q8VEE4 Gm4553-202ENSMUST00000210925 1044 ntAPPRIS P5 BASIC18.31■□□□□ 0.52
Rpa1Q8VEE4 Hoxc12-201ENSMUST00000055562 1031 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Rpa1Q8VEE4 Lrfn1-201ENSMUST00000055110 1479 ntAPPRIS P3 TSL 5 BASIC18.31■□□□□ 0.52
Rpa1Q8VEE4 Thumpd3-201ENSMUST00000032398 2163 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Rpa1Q8VEE4 Apoe-206ENSMUST00000174064 1408 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Rpa1Q8VEE4 Msi2-201ENSMUST00000092794 1855 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Rpa1Q8VEE4 Ngb-203ENSMUST00000110177 1611 ntAPPRIS ALT1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Rpa1Q8VEE4 Gm45447-201ENSMUST00000209874 1805 ntTSL 5 BASIC18.3■□□□□ 0.52
Rpa1Q8VEE4 Cspg5-202ENSMUST00000196060 3790 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Rpa1Q8VEE4 Kcnip1-201ENSMUST00000065970 1749 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Rpa1Q8VEE4 Amacr-201ENSMUST00000070877 2577 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Retrieved 100 of 76,532 protein–RNA pairs in 17.7 ms