Protein–RNA interactions for Protein: Q8VEE1

Lmcd1, LIM and cysteine-rich domains protein 1, mousemouse

Predictions only

Length 365 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lmcd1Q8VEE1 Sirt7-202ENSMUST00000106183 427 ntTSL 3 BASIC19.49■□□□□ 0.71
Lmcd1Q8VEE1 Gm42738-201ENSMUST00000201813 439 ntTSL 3 BASIC19.49■□□□□ 0.71
Lmcd1Q8VEE1 Pdcd2l-201ENSMUST00000002710 1295 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Lmcd1Q8VEE1 Alkbh2-201ENSMUST00000053657 1073 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Lmcd1Q8VEE1 Irx5-202ENSMUST00000210246 2550 ntTSL 5 BASIC19.49■□□□□ 0.71
Lmcd1Q8VEE1 Agbl4-205ENSMUST00000106591 1406 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
Lmcd1Q8VEE1 Fam181a-201ENSMUST00000179363 1406 ntAPPRIS P1 TSL 2 BASIC19.49■□□□□ 0.71
Lmcd1Q8VEE1 Fam181a-203ENSMUST00000191218 1419 ntAPPRIS P1 TSL 5 BASIC19.49■□□□□ 0.71
Lmcd1Q8VEE1 Mmp23-201ENSMUST00000030937 1434 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Lmcd1Q8VEE1 Bspry-202ENSMUST00000107449 2167 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
Lmcd1Q8VEE1 Hs2st1-201ENSMUST00000043325 6177 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Lmcd1Q8VEE1 E030030I06Rik-202ENSMUST00000179054 2081 ntAPPRIS P4 TSL 1 (best) BASIC19.48■□□□□ 0.71
Lmcd1Q8VEE1 Gm9934-201ENSMUST00000098303 2077 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Lmcd1Q8VEE1 Klf15-201ENSMUST00000032174 2373 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Lmcd1Q8VEE1 Slc10a3-201ENSMUST00000037967 2023 ntAPPRIS P2 TSL 1 (best) BASIC19.48■□□□□ 0.71
Lmcd1Q8VEE1 Ogg1-201ENSMUST00000032406 1549 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Lmcd1Q8VEE1 Josd2-203ENSMUST00000118493 922 ntAPPRIS P1 TSL 5 BASIC19.48■□□□□ 0.71
Lmcd1Q8VEE1 Blvrb-204ENSMUST00000133750 509 ntTSL 2 BASIC19.48■□□□□ 0.71
Lmcd1Q8VEE1 Gm17349-201ENSMUST00000163472 300 ntAPPRIS P1 TSL 5 BASIC19.48■□□□□ 0.71
Lmcd1Q8VEE1 Gm8258-201ENSMUST00000055593 1449 ntBASIC19.48■□□□□ 0.71
Lmcd1Q8VEE1 Exoc3l2-201ENSMUST00000011407 2200 ntTSL 5 BASIC19.48■□□□□ 0.71
Lmcd1Q8VEE1 Bdkrb1-202ENSMUST00000182899 1313 ntAPPRIS P1 TSL 5 BASIC19.48■□□□□ 0.71
Lmcd1Q8VEE1 Bdkrb1-201ENSMUST00000041229 1338 ntAPPRIS P1 BASIC19.48■□□□□ 0.71
Lmcd1Q8VEE1 Grsf1-201ENSMUST00000078945 2538 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Lmcd1Q8VEE1 Fpgs-201ENSMUST00000028148 2273 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Lmcd1Q8VEE1 Fam102b-202ENSMUST00000171143 5702 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Lmcd1Q8VEE1 Eif2b4-212ENSMUST00000202758 1767 ntTSL 5 BASIC19.47■□□□□ 0.71
Lmcd1Q8VEE1 Rogdi-207ENSMUST00000202281 1355 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Lmcd1Q8VEE1 Plpbp-202ENSMUST00000098851 1368 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Lmcd1Q8VEE1 Rad1-201ENSMUST00000022856 1514 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Lmcd1Q8VEE1 Calu-207ENSMUST00000173216 673 ntTSL 5 BASIC19.47■□□□□ 0.71
Lmcd1Q8VEE1 Gm28626-201ENSMUST00000187004 520 ntTSL 2 BASIC19.47■□□□□ 0.71
Lmcd1Q8VEE1 6430500D05Rik-201ENSMUST00000198286 1176 ntBASIC19.47■□□□□ 0.71
Lmcd1Q8VEE1 1700022H01Rik-201ENSMUST00000219142 387 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Lmcd1Q8VEE1 Gm8309-201ENSMUST00000206627 1448 ntBASIC19.47■□□□□ 0.71
Lmcd1Q8VEE1 Npdc1-201ENSMUST00000055921 1412 ntAPPRIS ALT2 TSL 5 BASIC19.47■□□□□ 0.71
Lmcd1Q8VEE1 Gpc3-202ENSMUST00000114857 1880 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Lmcd1Q8VEE1 9130024F11Rik-201ENSMUST00000135238 1300 ntTSL 2 BASIC19.47■□□□□ 0.71
Lmcd1Q8VEE1 Praf2-201ENSMUST00000033489 1339 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Lmcd1Q8VEE1 Dnajb11-201ENSMUST00000004574 1927 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Lmcd1Q8VEE1 Cacnb1-203ENSMUST00000103144 2236 ntTSL 5 BASIC19.47■□□□□ 0.71
Lmcd1Q8VEE1 Ppp3ca-201ENSMUST00000056758 2194 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Lmcd1Q8VEE1 1810010H24Rik-201ENSMUST00000106767 1100 ntAPPRIS P2 TSL 2 BASIC19.46■□□□□ 0.71
Lmcd1Q8VEE1 Fam167b-201ENSMUST00000052835 913 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Lmcd1Q8VEE1 Patz1-203ENSMUST00000094471 2930 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Lmcd1Q8VEE1 Plk5-202ENSMUST00000105351 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
Lmcd1Q8VEE1 Gpr160-202ENSMUST00000108258 2139 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Lmcd1Q8VEE1 Ltbr-201ENSMUST00000032489 2107 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Lmcd1Q8VEE1 Plk5-201ENSMUST00000039836 2112 ntAPPRIS P3 TSL 2 BASIC19.46■□□□□ 0.71
Lmcd1Q8VEE1 Stoml1-201ENSMUST00000034883 1984 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Lmcd1Q8VEE1 Tnks2-201ENSMUST00000025729 6481 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
Lmcd1Q8VEE1 Syt17-203ENSMUST00000203485 1932 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Lmcd1Q8VEE1 Pus1-201ENSMUST00000031481 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Lmcd1Q8VEE1 Cadps-202ENSMUST00000112657 5455 ntAPPRIS ALT2 TSL 5 BASIC19.45■□□□□ 0.7
Lmcd1Q8VEE1 Bfsp1-202ENSMUST00000099296 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Lmcd1Q8VEE1 Aicda-202ENSMUST00000160685 1292 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Lmcd1Q8VEE1 Gm17182-201ENSMUST00000163795 860 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Lmcd1Q8VEE1 Anapc13-203ENSMUST00000188398 727 ntAPPRIS P1 TSL 2 BASIC19.45■□□□□ 0.7
Lmcd1Q8VEE1 Acvr1c-204ENSMUST00000112608 1497 ntAPPRIS ALT2 TSL 5 BASIC19.45■□□□□ 0.7
Lmcd1Q8VEE1 Hnrnpf-202ENSMUST00000163168 2401 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Lmcd1Q8VEE1 Ccnd3-218ENSMUST00000183177 2060 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
Lmcd1Q8VEE1 Ppp1r1b-204ENSMUST00000137634 1343 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Lmcd1Q8VEE1 Sephs1-202ENSMUST00000115019 2933 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Lmcd1Q8VEE1 Gm9774-202ENSMUST00000192538 1392 ntAPPRIS P1 BASIC19.44■□□□□ 0.7
Lmcd1Q8VEE1 Sult4a1-201ENSMUST00000082365 2383 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Lmcd1Q8VEE1 Chst7-201ENSMUST00000044138 2206 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Lmcd1Q8VEE1 Tmem86a-201ENSMUST00000010451 1831 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Lmcd1Q8VEE1 C030014I23Rik-201ENSMUST00000080911 1810 ntBASIC19.44■□□□□ 0.7
Lmcd1Q8VEE1 Atp5d-203ENSMUST00000105367 1410 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
Lmcd1Q8VEE1 0610012G03Rik-201ENSMUST00000202722 1445 ntAPPRIS P1 BASIC19.44■□□□□ 0.7
Lmcd1Q8VEE1 Aldh7a1-206ENSMUST00000172734 1880 ntTSL 5 BASIC19.44■□□□□ 0.7
Lmcd1Q8VEE1 Cyp4f41-ps-201ENSMUST00000126790 1077 ntBASIC19.44■□□□□ 0.7
Lmcd1Q8VEE1 Flg-203ENSMUST00000178695 777 ntAPPRIS P5 BASIC19.44■□□□□ 0.7
Lmcd1Q8VEE1 Gm26829-201ENSMUST00000180581 934 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Lmcd1Q8VEE1 Gm17807-201ENSMUST00000186869 298 ntBASIC19.44■□□□□ 0.7
Lmcd1Q8VEE1 Umpk-ps-201ENSMUST00000211897 827 ntBASIC19.44■□□□□ 0.7
Lmcd1Q8VEE1 Gm5867-201ENSMUST00000063197 592 ntBASIC19.44■□□□□ 0.7
Lmcd1Q8VEE1 Homer1-206ENSMUST00000109493 2580 ntTSL 5 BASIC19.44■□□□□ 0.7
Lmcd1Q8VEE1 Fam159b-201ENSMUST00000043061 1310 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Lmcd1Q8VEE1 Dpf1-203ENSMUST00000108230 1553 ntTSL 5 BASIC19.44■□□□□ 0.7
Lmcd1Q8VEE1 Ildr2-204ENSMUST00000192732 2263 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Lmcd1Q8VEE1 Prr3-209ENSMUST00000174849 581 ntTSL 2 BASIC19.43■□□□□ 0.7
Lmcd1Q8VEE1 Gm45442-201ENSMUST00000210038 411 ntTSL 3 BASIC19.43■□□□□ 0.7
Lmcd1Q8VEE1 Hsbp1-202ENSMUST00000212468 638 ntAPPRIS P1 TSL 2 BASIC19.43■□□□□ 0.7
Lmcd1Q8VEE1 Gm5540-201ENSMUST00000131852 1848 ntBASIC19.43■□□□□ 0.7
Lmcd1Q8VEE1 Nagk-203ENSMUST00000113851 1323 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Lmcd1Q8VEE1 Hat1-202ENSMUST00000112122 1899 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
Lmcd1Q8VEE1 Dab2-208ENSMUST00000160134 1374 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
Lmcd1Q8VEE1 Kis2-201ENSMUST00000133214 1717 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Lmcd1Q8VEE1 Psmd8-203ENSMUST00000186182 1512 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Lmcd1Q8VEE1 Pon1-201ENSMUST00000002663 1513 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Lmcd1Q8VEE1 Trp73os-201ENSMUST00000143429 2192 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Lmcd1Q8VEE1 Slc35g2-201ENSMUST00000093792 1590 ntAPPRIS P1 TSL 2 BASIC19.42■□□□□ 0.7
Lmcd1Q8VEE1 AC124601.2-201ENSMUST00000222888 759 ntTSL 2 BASIC19.42■□□□□ 0.7
Lmcd1Q8VEE1 Krt88-201ENSMUST00000023781 903 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Lmcd1Q8VEE1 Hebp1-201ENSMUST00000045855 1058 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Lmcd1Q8VEE1 Idnk-201ENSMUST00000051490 764 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Lmcd1Q8VEE1 Tctex1d4-201ENSMUST00000062206 990 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Lmcd1Q8VEE1 Gabbr2-201ENSMUST00000107749 5750 ntAPPRIS P1 TSL 2 BASIC19.42■□□□□ 0.7
Lmcd1Q8VEE1 Crtc2-201ENSMUST00000029545 2747 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Retrieved 100 of 76,532 protein–RNA pairs in 24.7 ms