Protein–RNA interactions for Protein: Q8VE91

Retreg1d, Reticulophagy regulator 1, mousemouse

Predictions only

Length 480 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Retreg1dQ8VE91 Csnk1a1-210ENSMUST00000170862 2259 ntAPPRIS ALT1 TSL 5 BASIC18.03■□□□□ 0.48
Retreg1dQ8VE91 Rasl10b-202ENSMUST00000108140 3156 ntAPPRIS P1 TSL 2 BASIC18.03■□□□□ 0.48
Retreg1dQ8VE91 Chd3os-201ENSMUST00000129321 2081 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Retreg1dQ8VE91 Mmp15-201ENSMUST00000034243 5135 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Retreg1dQ8VE91 1810055G02Rik-201ENSMUST00000039048 1882 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Retreg1dQ8VE91 Uck1-201ENSMUST00000002625 2005 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Retreg1dQ8VE91 Crebbp-201ENSMUST00000023165 10820 ntAPPRIS P2 TSL 1 (best) BASIC18.03■□□□□ 0.48
Retreg1dQ8VE91 Gm10167-201ENSMUST00000150411 1479 ntBASIC18.03■□□□□ 0.48
Retreg1dQ8VE91 1600012H06Rik-203ENSMUST00000174004 1466 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Retreg1dQ8VE91 Kcnb1-201ENSMUST00000059826 4015 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Retreg1dQ8VE91 Kmt5b-204ENSMUST00000113970 2975 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
Retreg1dQ8VE91 Mrps10-203ENSMUST00000119945 1018 ntAPPRIS P4 TSL 1 (best) BASIC18.03■□□□□ 0.48
Retreg1dQ8VE91 Mrps18a-202ENSMUST00000123646 621 ntTSL 2 BASIC18.03■□□□□ 0.48
Retreg1dQ8VE91 Taz-208ENSMUST00000132437 768 ntTSL 3 BASIC18.03■□□□□ 0.48
Retreg1dQ8VE91 AA465934-203ENSMUST00000177150 383 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Retreg1dQ8VE91 Gm19094-201ENSMUST00000209791 1246 ntBASIC18.03■□□□□ 0.48
Retreg1dQ8VE91 Olfr718-ps1-204ENSMUST00000218872 963 ntAPPRIS ALT2 BASIC18.03■□□□□ 0.48
Retreg1dQ8VE91 Tmem126a-201ENSMUST00000032844 799 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Retreg1dQ8VE91 Lingo1-203ENSMUST00000114256 2782 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Retreg1dQ8VE91 Bcl9l-206ENSMUST00000220303 5760 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
Retreg1dQ8VE91 Arrb2-202ENSMUST00000084954 1732 ntTSL 5 BASIC18.03■□□□□ 0.48
Retreg1dQ8VE91 Ntmt1-201ENSMUST00000041830 1387 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Retreg1dQ8VE91 Hnrnpul2-201ENSMUST00000096753 5726 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Retreg1dQ8VE91 Itgb4-210ENSMUST00000169928 6160 ntAPPRIS P2 TSL 5 BASIC18.03■□□□□ 0.48
Retreg1dQ8VE91 Faxc-201ENSMUST00000029908 2627 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Retreg1dQ8VE91 Fgfr3-202ENSMUST00000087820 2630 ntAPPRIS ALT2 TSL 5 BASIC18.02■□□□□ 0.48
Retreg1dQ8VE91 Gm26795-201ENSMUST00000180993 1952 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
Retreg1dQ8VE91 Xkr4-201ENSMUST00000070533 3634 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Retreg1dQ8VE91 Sema3c-201ENSMUST00000030568 5491 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Retreg1dQ8VE91 Dstn-201ENSMUST00000103172 1911 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Retreg1dQ8VE91 Pqlc3-201ENSMUST00000054536 1928 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Retreg1dQ8VE91 Ppp1r13b-201ENSMUST00000054815 4389 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Retreg1dQ8VE91 1110004F10Rik-202ENSMUST00000106607 1153 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
Retreg1dQ8VE91 Gnas-208ENSMUST00000109087 1716 ntAPPRIS P4 TSL 1 (best) BASIC18.02■□□□□ 0.48
Retreg1dQ8VE91 Tsen2-203ENSMUST00000130425 638 ntTSL 3 BASIC18.02■□□□□ 0.48
Retreg1dQ8VE91 Foxa3-201ENSMUST00000036018 2037 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Retreg1dQ8VE91 Gm7075-201ENSMUST00000054760 425 ntAPPRIS P1 BASIC18.02■□□□□ 0.48
Retreg1dQ8VE91 D11Wsu47e-202ENSMUST00000106621 2062 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
Retreg1dQ8VE91 Marc2-201ENSMUST00000068725 1917 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
Retreg1dQ8VE91 Eid2b-201ENSMUST00000094651 1751 ntAPPRIS P1 BASIC18.02■□□□□ 0.47
Retreg1dQ8VE91 Porcn-202ENSMUST00000082320 1883 ntAPPRIS ALT1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Retreg1dQ8VE91 Arpc5-202ENSMUST00000097536 1737 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Retreg1dQ8VE91 Grk2-202ENSMUST00000088737 3376 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Retreg1dQ8VE91 Tmco4-202ENSMUST00000050949 3318 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Retreg1dQ8VE91 Gm12356-201ENSMUST00000122854 353 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Retreg1dQ8VE91 Gm37856-201ENSMUST00000191634 999 ntBASIC18.01■□□□□ 0.47
Retreg1dQ8VE91 AC135637.1-201ENSMUST00000227750 365 ntBASIC18.01■□□□□ 0.47
Retreg1dQ8VE91 Lbx2-201ENSMUST00000041265 817 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Retreg1dQ8VE91 Mbip-201ENSMUST00000021416 1512 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Retreg1dQ8VE91 Tbx2-201ENSMUST00000000095 3626 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Retreg1dQ8VE91 Hs3st5-202ENSMUST00000167191 2408 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Retreg1dQ8VE91 Zfp821-206ENSMUST00000212964 2033 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Retreg1dQ8VE91 Ccser1-203ENSMUST00000126214 5657 ntAPPRIS P1 TSL 5 BASIC18.01■□□□□ 0.47
Retreg1dQ8VE91 Vti1b-201ENSMUST00000055262 1490 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Retreg1dQ8VE91 Tifa-201ENSMUST00000054483 2245 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Retreg1dQ8VE91 Gm43231-201ENSMUST00000202960 2258 ntBASIC18■□□□□ 0.47
Retreg1dQ8VE91 Galnt16-204ENSMUST00000218943 2047 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Retreg1dQ8VE91 Grk6-201ENSMUST00000001115 2994 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
Retreg1dQ8VE91 Snx12-204ENSMUST00000156473 1114 ntTSL 1 (best) BASIC18■□□□□ 0.47
Retreg1dQ8VE91 AI480526-205ENSMUST00000160255 1095 ntTSL 5 BASIC18■□□□□ 0.47
Retreg1dQ8VE91 Zfp580-201ENSMUST00000069324 1096 ntAPPRIS P2 TSL 1 (best) BASIC18■□□□□ 0.47
Retreg1dQ8VE91 Hist2h2ac-201ENSMUST00000090782 520 ntAPPRIS P1 BASIC18■□□□□ 0.47
Retreg1dQ8VE91 Dock9-202ENSMUST00000100299 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
Retreg1dQ8VE91 Anapc16-204ENSMUST00000182898 1852 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Retreg1dQ8VE91 Ccdc6-203ENSMUST00000147545 5511 ntAPPRIS P1 TSL 5 BASIC18■□□□□ 0.47
Retreg1dQ8VE91 Rprm-201ENSMUST00000100089 1460 ntAPPRIS P1 BASIC18■□□□□ 0.47
Retreg1dQ8VE91 4930518J20Rik-201ENSMUST00000195064 1478 ntBASIC18■□□□□ 0.47
Retreg1dQ8VE91 Palm-202ENSMUST00000105379 2519 ntTSL 1 (best) BASIC18■□□□□ 0.47
Retreg1dQ8VE91 Arhgap44-202ENSMUST00000093001 2256 ntTSL 2 BASIC18■□□□□ 0.47
Retreg1dQ8VE91 Gpr137-203ENSMUST00000099776 1569 ntTSL 1 (best) BASIC18■□□□□ 0.47
Retreg1dQ8VE91 Sept9-201ENSMUST00000019038 3784 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
Retreg1dQ8VE91 Tbkbp1-203ENSMUST00000107614 2391 ntAPPRIS ALT2 TSL 5 BASIC17.99■□□□□ 0.47
Retreg1dQ8VE91 Gnptab-201ENSMUST00000020251 5390 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Retreg1dQ8VE91 Nbl1-201ENSMUST00000042844 1793 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Retreg1dQ8VE91 Fgf2os-201ENSMUST00000153785 1441 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Retreg1dQ8VE91 Mfsd14a-201ENSMUST00000029570 2782 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Retreg1dQ8VE91 Smad5-203ENSMUST00000109876 4570 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Retreg1dQ8VE91 Slit3-201ENSMUST00000069837 5228 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Retreg1dQ8VE91 Rbm24-201ENSMUST00000037923 3086 ntAPPRIS P1 TSL 2 BASIC17.99■□□□□ 0.47
Retreg1dQ8VE91 Gm22240-201ENSMUST00000175225 82 ntBASIC17.99■□□□□ 0.47
Retreg1dQ8VE91 C430014B12Rik-202ENSMUST00000186858 657 ntTSL 2 BASIC17.99■□□□□ 0.47
Retreg1dQ8VE91 Chpt1-202ENSMUST00000073783 852 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
Retreg1dQ8VE91 Hspe1-201ENSMUST00000075242 774 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Retreg1dQ8VE91 Smn1-202ENSMUST00000091321 223 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Retreg1dQ8VE91 Ptgfrn-201ENSMUST00000102694 5902 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Retreg1dQ8VE91 Gmpr-201ENSMUST00000000260 1580 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Retreg1dQ8VE91 Alyref-201ENSMUST00000026125 3527 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Retreg1dQ8VE91 Thoc3-201ENSMUST00000026990 2335 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Retreg1dQ8VE91 Papola-212ENSMUST00000168186 2436 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Retreg1dQ8VE91 Adamtsl5-201ENSMUST00000095446 1957 ntAPPRIS P1 TSL 5 BASIC17.99■□□□□ 0.47
Retreg1dQ8VE91 Zc3h14-202ENSMUST00000057000 3046 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Retreg1dQ8VE91 Slc39a5-201ENSMUST00000042666 1947 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Retreg1dQ8VE91 Atad2b-201ENSMUST00000045664 8035 ntAPPRIS P1 TSL 5 BASIC17.98■□□□□ 0.47
Retreg1dQ8VE91 Ppp1r8-202ENSMUST00000105919 1090 ntAPPRIS ALT1 TSL 3 BASIC17.98■□□□□ 0.47
Retreg1dQ8VE91 Lypla1-208ENSMUST00000150971 877 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Retreg1dQ8VE91 Bnip1-201ENSMUST00000015725 1085 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Retreg1dQ8VE91 Trmt13-210ENSMUST00000198454 880 ntBASIC17.98■□□□□ 0.47
Retreg1dQ8VE91 Rps16-201ENSMUST00000082134 1109 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Retreg1dQ8VE91 Dynll2-204ENSMUST00000178105 2187 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Retreg1dQ8VE91 Gm10300-201ENSMUST00000094662 2296 ntAPPRIS P1 BASIC17.98■□□□□ 0.47
Retrieved 100 of 76,532 protein–RNA pairs in 47.5 ms