Protein–RNA interactions for Protein: Q8R429

Atp2a1, Sarcoplasmic/endoplasmic reticulum calcium ATPase 1, mousemouse

Predictions only

Length 994 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atp2a1Q8R429 Zdhhc1-201ENSMUST00000044286 1737 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Atp2a1Q8R429 Nnat-201ENSMUST00000088484 458 ntTSL 2 BASIC20.4■□□□□ 0.86
Atp2a1Q8R429 Mfsd6-205ENSMUST00000156876 4932 ntAPPRIS P4 TSL 5 BASIC20.4■□□□□ 0.86
Atp2a1Q8R429 Tmie-201ENSMUST00000050958 2802 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Atp2a1Q8R429 Prkg2-201ENSMUST00000031277 2618 ntTSL 5 BASIC20.4■□□□□ 0.86
Atp2a1Q8R429 Srsf4-202ENSMUST00000053819 2257 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
Atp2a1Q8R429 Siglecf-206ENSMUST00000206299 2149 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.86
Atp2a1Q8R429 Tpra1-201ENSMUST00000055022 1820 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
Atp2a1Q8R429 Mark2-206ENSMUST00000164205 3104 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.85
Atp2a1Q8R429 Stx2-201ENSMUST00000031378 2939 ntAPPRIS P3 TSL 1 (best) BASIC20.39■□□□□ 0.85
Atp2a1Q8R429 Mir6982-201ENSMUST00000184354 68 ntBASIC20.39■□□□□ 0.85
Atp2a1Q8R429 Rsu1-209ENSMUST00000191959 720 ntTSL 3 BASIC20.39■□□□□ 0.85
Atp2a1Q8R429 6530437J22Rik-201ENSMUST00000207515 773 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
Atp2a1Q8R429 Mrpl3-205ENSMUST00000149243 2309 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
Atp2a1Q8R429 Lsp1-202ENSMUST00000038946 1828 ntAPPRIS P3 TSL 1 (best) BASIC20.39■□□□□ 0.85
Atp2a1Q8R429 Lin7a-203ENSMUST00000218031 1769 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
Atp2a1Q8R429 Hmgxb3-201ENSMUST00000091884 5101 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Atp2a1Q8R429 Ulk2-201ENSMUST00000004920 5743 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Atp2a1Q8R429 Ngb-201ENSMUST00000021420 1616 ntAPPRIS P3 TSL 1 (best) BASIC20.38■□□□□ 0.85
Atp2a1Q8R429 Asap2-203ENSMUST00000090834 5097 ntTSL 5 BASIC20.38■□□□□ 0.85
Atp2a1Q8R429 Cxadr-201ENSMUST00000023572 5734 ntAPPRIS P3 TSL 1 (best) BASIC20.38■□□□□ 0.85
Atp2a1Q8R429 Tlcd1-201ENSMUST00000092880 2700 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
Atp2a1Q8R429 Cdk11b-202ENSMUST00000105598 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
Atp2a1Q8R429 Gm26657-201ENSMUST00000181745 1308 ntAPPRIS P1 BASIC20.38■□□□□ 0.85
Atp2a1Q8R429 Tcp1-201ENSMUST00000089024 1902 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Atp2a1Q8R429 Mthfsl-201ENSMUST00000113110 801 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Atp2a1Q8R429 Gm1673-203ENSMUST00000114383 511 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
Atp2a1Q8R429 Mthfs-203ENSMUST00000118870 705 ntTSL 3 BASIC20.38■□□□□ 0.85
Atp2a1Q8R429 Gm2479-201ENSMUST00000173312 1053 ntTSL 3 BASIC20.38■□□□□ 0.85
Atp2a1Q8R429 Gm10830-201ENSMUST00000186379 636 ntTSL 5 BASIC20.38■□□□□ 0.85
Atp2a1Q8R429 Tpsb2-201ENSMUST00000069616 1081 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Atp2a1Q8R429 Mthfs-201ENSMUST00000085256 816 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Atp2a1Q8R429 Tbc1d25-204ENSMUST00000172020 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
Atp2a1Q8R429 Nova2-202ENSMUST00000220302 8372 ntAPPRIS P1 TSL 5 BASIC20.38■□□□□ 0.85
Atp2a1Q8R429 Nova2-201ENSMUST00000032571 8372 ntTSL 5 BASIC20.38■□□□□ 0.85
Atp2a1Q8R429 Srcin1-201ENSMUST00000107590 5493 ntAPPRIS ALT2 TSL 5 BASIC20.38■□□□□ 0.85
Atp2a1Q8R429 Pdzd3-201ENSMUST00000034618 2193 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Atp2a1Q8R429 Mrpl15-205ENSMUST00000146665 1569 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Atp2a1Q8R429 Gdf11-201ENSMUST00000026408 4062 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Atp2a1Q8R429 Iscu-202ENSMUST00000112311 1395 ntTSL 2 BASIC20.37■□□□□ 0.85
Atp2a1Q8R429 Hoxd3-201ENSMUST00000047830 2292 ntAPPRIS P1 TSL 5 BASIC20.37■□□□□ 0.85
Atp2a1Q8R429 Ghrhr-202ENSMUST00000203241 1328 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Atp2a1Q8R429 Rab1a-203ENSMUST00000109602 2626 ntTSL 5 BASIC20.37■□□□□ 0.85
Atp2a1Q8R429 Irx3-201ENSMUST00000093312 2610 ntAPPRIS P4 TSL 1 (best) BASIC20.37■□□□□ 0.85
Atp2a1Q8R429 AW047730-202ENSMUST00000181406 2579 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Atp2a1Q8R429 AC107452.1-201ENSMUST00000227963 481 ntBASIC20.37■□□□□ 0.85
Atp2a1Q8R429 Cnih3-202ENSMUST00000161880 1995 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Atp2a1Q8R429 Stx18-201ENSMUST00000031008 1471 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Atp2a1Q8R429 Exoc5-206ENSMUST00000161504 2582 ntTSL 5 BASIC20.37■□□□□ 0.85
Atp2a1Q8R429 Galnt14-202ENSMUST00000112591 1843 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Atp2a1Q8R429 Alg1-202ENSMUST00000100196 1755 ntAPPRIS P2 TSL 1 (best) BASIC20.36■□□□□ 0.85
Atp2a1Q8R429 Blcap-202ENSMUST00000109528 2056 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Atp2a1Q8R429 Slc39a5-202ENSMUST00000167859 2025 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Atp2a1Q8R429 Lrch3-201ENSMUST00000023491 5536 ntAPPRIS P3 TSL 1 (best) BASIC20.36■□□□□ 0.85
Atp2a1Q8R429 Stk11-201ENSMUST00000003152 2566 ntAPPRIS P3 TSL 1 (best) BASIC20.36■□□□□ 0.85
Atp2a1Q8R429 Pou2f2-206ENSMUST00000108418 1934 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Atp2a1Q8R429 Moap1-202ENSMUST00000178384 1284 ntAPPRIS P1 TSL 2 BASIC20.36■□□□□ 0.85
Atp2a1Q8R429 Alkbh1-212ENSMUST00000185301 408 ntBASIC20.36■□□□□ 0.85
Atp2a1Q8R429 Rwdd1-201ENSMUST00000019917 1090 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Atp2a1Q8R429 Kcnn4-203ENSMUST00000205626 461 ntTSL 5 BASIC20.36■□□□□ 0.85
Atp2a1Q8R429 Tesmin-201ENSMUST00000025840 2234 ntAPPRIS P3 TSL 1 (best) BASIC20.36■□□□□ 0.85
Atp2a1Q8R429 Golph3-205ENSMUST00000228671 2842 ntBASIC20.36■□□□□ 0.85
Atp2a1Q8R429 Rassf7-201ENSMUST00000046890 1525 ntAPPRIS P2 TSL 1 (best) BASIC20.36■□□□□ 0.85
Atp2a1Q8R429 Gapvd1-201ENSMUST00000028224 5695 ntAPPRIS P2 TSL 1 (best) BASIC20.36■□□□□ 0.85
Atp2a1Q8R429 Kl-201ENSMUST00000078856 5118 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Atp2a1Q8R429 Clcn4-206ENSMUST00000210594 2539 ntAPPRIS ALT2 TSL 5 BASIC20.35■□□□□ 0.85
Atp2a1Q8R429 Nsmf-206ENSMUST00000114388 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
Atp2a1Q8R429 Dhrs7-201ENSMUST00000021512 1385 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Atp2a1Q8R429 Hhipl1-201ENSMUST00000021685 5174 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Atp2a1Q8R429 R3hdm4-201ENSMUST00000045628 1898 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Atp2a1Q8R429 Tmbim1-201ENSMUST00000016309 2378 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Atp2a1Q8R429 Hoxb3os-201ENSMUST00000131275 2315 ntTSL 3 BASIC20.35■□□□□ 0.85
Atp2a1Q8R429 Atox1-201ENSMUST00000108857 541 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Atp2a1Q8R429 Snrnp35-202ENSMUST00000111453 1181 ntAPPRIS P1 TSL 2 BASIC20.35■□□□□ 0.85
Atp2a1Q8R429 Zfp783-201ENSMUST00000095946 670 ntBASIC20.35■□□□□ 0.85
Atp2a1Q8R429 Dip2c-203ENSMUST00000174552 8023 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Atp2a1Q8R429 Il15ra-201ENSMUST00000078834 1600 ntAPPRIS P3 TSL 5 BASIC20.35■□□□□ 0.85
Atp2a1Q8R429 Esco1-202ENSMUST00000097670 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
Atp2a1Q8R429 Pde1b-201ENSMUST00000023132 3218 ntAPPRIS P2 TSL 1 (best) BASIC20.34■□□□□ 0.85
Atp2a1Q8R429 Ergic3-201ENSMUST00000006035 1377 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Atp2a1Q8R429 Fam105a-202ENSMUST00000226145 2950 ntAPPRIS P1 BASIC20.34■□□□□ 0.85
Atp2a1Q8R429 Mir1199-201ENSMUST00000117015 119 ntBASIC20.34■□□□□ 0.85
Atp2a1Q8R429 Gm715-201ENSMUST00000117865 831 ntBASIC20.34■□□□□ 0.85
Atp2a1Q8R429 Insig2-203ENSMUST00000159085 1252 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Atp2a1Q8R429 Fev-202ENSMUST00000159232 928 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Atp2a1Q8R429 Dleu2-210ENSMUST00000183054 722 ntTSL 5 BASIC20.34■□□□□ 0.85
Atp2a1Q8R429 Ap2m1-202ENSMUST00000090023 2080 ntAPPRIS ALT1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Atp2a1Q8R429 Gabarapl1-201ENSMUST00000032264 1820 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Atp2a1Q8R429 Dynll2-204ENSMUST00000178105 2187 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Atp2a1Q8R429 Irx3-202ENSMUST00000175795 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.85
Atp2a1Q8R429 Mdfi-202ENSMUST00000066368 1711 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Atp2a1Q8R429 Gm6209-202ENSMUST00000194629 1506 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
Atp2a1Q8R429 Setd3-201ENSMUST00000071095 2755 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Atp2a1Q8R429 Dyrk1b-203ENSMUST00000172761 2018 ntAPPRIS ALT1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Atp2a1Q8R429 Rhbdf1-201ENSMUST00000020524 2946 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Atp2a1Q8R429 Lhpp-202ENSMUST00000106170 999 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
Atp2a1Q8R429 Tlcd1-203ENSMUST00000108338 714 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
Atp2a1Q8R429 Rhno1-202ENSMUST00000112151 1108 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Atp2a1Q8R429 Gtf2a2-204ENSMUST00000119905 622 ntTSL 2 BASIC20.33■□□□□ 0.85
Atp2a1Q8R429 Ost4-201ENSMUST00000132034 576 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Retrieved 100 of 76,532 protein–RNA pairs in 24.2 ms