Protein–RNA interactions for Protein: Q8R1N4

Nudcd3, NudC domain-containing protein 3, mousemouse

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nudcd3Q8R1N4 Camk1-201ENSMUST00000032409 1496 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Nudcd3Q8R1N4 Otud7a-201ENSMUST00000058476 3483 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Nudcd3Q8R1N4 Lysmd4-209ENSMUST00000208998 2110 ntAPPRIS P2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Nudcd3Q8R1N4 Asb1-202ENSMUST00000086843 2490 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Nudcd3Q8R1N4 Gsk3b-201ENSMUST00000023507 8303 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
Nudcd3Q8R1N4 Pdia6-201ENSMUST00000057288 2175 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Nudcd3Q8R1N4 Paip2-204ENSMUST00000115736 857 ntAPPRIS P1 TSL 3 BASIC18.26■□□□□ 0.51
Nudcd3Q8R1N4 Usf2-203ENSMUST00000162228 960 ntTSL 5 BASIC18.26■□□□□ 0.51
Nudcd3Q8R1N4 Gm27801-201ENSMUST00000184174 223 ntBASIC18.26■□□□□ 0.51
Nudcd3Q8R1N4 Ctf1-204ENSMUST00000206506 784 ntTSL 2 BASIC18.26■□□□□ 0.51
Nudcd3Q8R1N4 Gm9847-201ENSMUST00000052528 599 ntBASIC18.26■□□□□ 0.51
Nudcd3Q8R1N4 Klf13-201ENSMUST00000063694 6396 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Nudcd3Q8R1N4 Gm15558-201ENSMUST00000126849 2018 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Nudcd3Q8R1N4 Kazald1-201ENSMUST00000026234 1380 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Nudcd3Q8R1N4 Mark3-202ENSMUST00000084953 3365 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Nudcd3Q8R1N4 D1Ertd622e-204ENSMUST00000153115 3495 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Nudcd3Q8R1N4 Smim15-205ENSMUST00000225972 2097 ntAPPRIS P1 BASIC18.26■□□□□ 0.51
Nudcd3Q8R1N4 Ndufv1-202ENSMUST00000128787 1436 ntAPPRIS ALT2 TSL 5 BASIC18.25■□□□□ 0.51
Nudcd3Q8R1N4 Ndufv1-207ENSMUST00000134479 1438 ntTSL 5 BASIC18.25■□□□□ 0.51
Nudcd3Q8R1N4 Rnf157-201ENSMUST00000100202 4619 ntAPPRIS P2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Nudcd3Q8R1N4 Clasp2-204ENSMUST00000213663 2727 ntTSL 5 BASIC18.25■□□□□ 0.51
Nudcd3Q8R1N4 Smox-205ENSMUST00000110182 985 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Nudcd3Q8R1N4 Gm16076-201ENSMUST00000140116 480 ntTSL 3 BASIC18.25■□□□□ 0.51
Nudcd3Q8R1N4 Rps2-ps10-202ENSMUST00000170335 965 ntBASIC18.25■□□□□ 0.51
Nudcd3Q8R1N4 Smad6-203ENSMUST00000179458 273 ntBASIC18.25■□□□□ 0.51
Nudcd3Q8R1N4 Gm45447-201ENSMUST00000209874 1805 ntTSL 5 BASIC18.25■□□□□ 0.51
Nudcd3Q8R1N4 Sft2d2-201ENSMUST00000043338 5535 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Nudcd3Q8R1N4 Pla2g12a-201ENSMUST00000029629 1561 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Nudcd3Q8R1N4 Ddit4-201ENSMUST00000020308 1755 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Nudcd3Q8R1N4 Dock3-201ENSMUST00000044532 9063 ntAPPRIS P1 TSL 2 BASIC18.24■□□□□ 0.51
Nudcd3Q8R1N4 Il17re-203ENSMUST00000101065 1973 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Nudcd3Q8R1N4 Tacc3-203ENSMUST00000114426 2187 ntAPPRIS P3 TSL 1 (best) BASIC18.24■□□□□ 0.51
Nudcd3Q8R1N4 Tuba1b-201ENSMUST00000077577 1743 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Nudcd3Q8R1N4 Mrgprf-202ENSMUST00000117718 1935 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Nudcd3Q8R1N4 Grk6-201ENSMUST00000001115 2994 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
Nudcd3Q8R1N4 Ankra2-205ENSMUST00000150916 1028 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Nudcd3Q8R1N4 Hyi-205ENSMUST00000194248 936 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Nudcd3Q8R1N4 AC117245.1-201ENSMUST00000215481 566 ntTSL 3 BASIC18.24■□□□□ 0.51
Nudcd3Q8R1N4 Zbtb8a-201ENSMUST00000030610 2321 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Nudcd3Q8R1N4 Srsf11-202ENSMUST00000072875 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
Nudcd3Q8R1N4 Slain2-201ENSMUST00000143829 4828 ntTSL 5 BASIC18.24■□□□□ 0.51
Nudcd3Q8R1N4 Cdv3-201ENSMUST00000035484 3387 ntAPPRIS P3 TSL 1 (best) BASIC18.24■□□□□ 0.51
Nudcd3Q8R1N4 Atp2c1-201ENSMUST00000038118 4876 ntAPPRIS P3 TSL 1 (best) BASIC18.23■□□□□ 0.51
Nudcd3Q8R1N4 Pfn2-201ENSMUST00000066882 2342 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Nudcd3Q8R1N4 Garem1-201ENSMUST00000049260 4923 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Nudcd3Q8R1N4 Slc35e1-202ENSMUST00000152080 4383 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Nudcd3Q8R1N4 Dus1l-202ENSMUST00000106133 1762 ntAPPRIS ALT2 TSL 5 BASIC18.23■□□□□ 0.51
Nudcd3Q8R1N4 Gfer-201ENSMUST00000046839 1775 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Nudcd3Q8R1N4 Fbxl15-202ENSMUST00000177667 1243 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Nudcd3Q8R1N4 Pawr-202ENSMUST00000218332 870 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Nudcd3Q8R1N4 Rasl10b-204ENSMUST00000175848 3249 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Nudcd3Q8R1N4 Cyth2-201ENSMUST00000056820 2527 ntAPPRIS ALT1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Nudcd3Q8R1N4 Col27a1-201ENSMUST00000036300 7612 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Nudcd3Q8R1N4 Syde1-201ENSMUST00000040580 3288 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Nudcd3Q8R1N4 Map4k5-210ENSMUST00000171211 4334 ntTSL 2 BASIC18.23■□□□□ 0.51
Nudcd3Q8R1N4 Gnas-208ENSMUST00000109087 1716 ntAPPRIS P4 TSL 1 (best) BASIC18.23■□□□□ 0.51
Nudcd3Q8R1N4 Aifm2-204ENSMUST00000105455 1512 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Nudcd3Q8R1N4 Pgrmc1-201ENSMUST00000073339 1857 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Nudcd3Q8R1N4 B3galnt2-207ENSMUST00000221974 2439 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Nudcd3Q8R1N4 Mapk7-203ENSMUST00000108714 3069 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Nudcd3Q8R1N4 Atp8b1-201ENSMUST00000025482 6440 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Nudcd3Q8R1N4 Capzb-204ENSMUST00000102508 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Nudcd3Q8R1N4 Edem1-201ENSMUST00000089162 5817 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Nudcd3Q8R1N4 Ankrd39-201ENSMUST00000001172 2109 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Nudcd3Q8R1N4 Rilp-201ENSMUST00000042972 1489 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Nudcd3Q8R1N4 Cables1-201ENSMUST00000046948 3202 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
Nudcd3Q8R1N4 A930012L18Rik-201ENSMUST00000181094 2364 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Nudcd3Q8R1N4 Ap4s1-201ENSMUST00000021338 1035 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Nudcd3Q8R1N4 Zcchc13-201ENSMUST00000033692 1085 ntAPPRIS P1 BASIC18.22■□□□□ 0.51
Nudcd3Q8R1N4 Gm10645-201ENSMUST00000098605 1090 ntAPPRIS P1 BASIC18.22■□□□□ 0.51
Nudcd3Q8R1N4 Aldh5a1-201ENSMUST00000037615 5647 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Nudcd3Q8R1N4 Papola-203ENSMUST00000163473 2544 ntTSL 5 BASIC18.22■□□□□ 0.51
Nudcd3Q8R1N4 C1ql3-201ENSMUST00000061545 2535 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Nudcd3Q8R1N4 Snx14-205ENSMUST00000173011 2238 ntTSL 5 BASIC18.22■□□□□ 0.51
Nudcd3Q8R1N4 Arid3c-204ENSMUST00000171251 1751 ntAPPRIS P3 TSL 5 BASIC18.22■□□□□ 0.51
Nudcd3Q8R1N4 Zxdc-203ENSMUST00000113539 4864 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Nudcd3Q8R1N4 Arhgef19-201ENSMUST00000006618 3414 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Nudcd3Q8R1N4 Tmco4-202ENSMUST00000050949 3318 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Nudcd3Q8R1N4 Tbc1d9-202ENSMUST00000093393 5334 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Nudcd3Q8R1N4 Vps4a-201ENSMUST00000034388 2178 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Nudcd3Q8R1N4 Ncoa5-203ENSMUST00000122070 3117 ntTSL 5 BASIC18.21■□□□□ 0.51
Nudcd3Q8R1N4 Tmem79-201ENSMUST00000001456 2406 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Nudcd3Q8R1N4 Mrpl15-203ENSMUST00000130201 1894 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Nudcd3Q8R1N4 Emc6-202ENSMUST00000108480 563 ntAPPRIS P1 TSL 2 BASIC18.21■□□□□ 0.51
Nudcd3Q8R1N4 Gm27032-201ENSMUST00000183124 1116 ntBASIC18.21■□□□□ 0.51
Nudcd3Q8R1N4 1700064M15Rik-201ENSMUST00000185726 645 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Nudcd3Q8R1N4 Camkk2-202ENSMUST00000196742 1084 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Nudcd3Q8R1N4 Ikzf1-202ENSMUST00000048122 911 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Nudcd3Q8R1N4 2810025M15Rik-201ENSMUST00000061537 1194 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Nudcd3Q8R1N4 Ext2-212ENSMUST00000184931 2629 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Nudcd3Q8R1N4 Gm13032-201ENSMUST00000151848 2001 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Nudcd3Q8R1N4 Sertad4-204ENSMUST00000155579 3350 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Nudcd3Q8R1N4 Trim24-201ENSMUST00000031859 4042 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
Nudcd3Q8R1N4 Gm9194-201ENSMUST00000220749 1447 ntBASIC18.21■□□□□ 0.51
Nudcd3Q8R1N4 Nkiras2-201ENSMUST00000017981 2097 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Nudcd3Q8R1N4 Pick1-201ENSMUST00000018295 1977 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.5
Nudcd3Q8R1N4 Stox1-202ENSMUST00000133371 3510 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Nudcd3Q8R1N4 Nfkbid-203ENSMUST00000108176 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Nudcd3Q8R1N4 Htra3-202ENSMUST00000114233 1901 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Nudcd3Q8R1N4 Tarbp2-202ENSMUST00000100168 1278 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Retrieved 100 of 76,532 protein–RNA pairs in 28.1 ms