Protein–RNA interactions for Protein: Q8K4Z5

Sf3a1, Splicing factor 3A subunit 1, mousemouse

Known RBP Predictions only

Length 791 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sf3a1Q8K4Z5 Gm6209-202ENSMUST00000194629 1506 ntTSL 1 (best) BASIC22.33■■□□□ 1.17
Sf3a1Q8K4Z5 Gfra3-201ENSMUST00000025224 1992 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
Sf3a1Q8K4Z5 Lhpp-202ENSMUST00000106170 999 ntTSL 1 (best) BASIC22.33■■□□□ 1.17
Sf3a1Q8K4Z5 Tomm6-201ENSMUST00000113301 594 ntAPPRIS P1 TSL 2 BASIC22.33■■□□□ 1.17
Sf3a1Q8K4Z5 AC167978.1-201ENSMUST00000182488 456 ntTSL 3 BASIC22.33■■□□□ 1.17
Sf3a1Q8K4Z5 Gabarap-201ENSMUST00000018711 1351 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
Sf3a1Q8K4Z5 Plekhg3-201ENSMUST00000075249 5138 ntAPPRIS P2 TSL 1 (best) BASIC22.33■■□□□ 1.16
Sf3a1Q8K4Z5 Cables2-201ENSMUST00000108891 2975 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
Sf3a1Q8K4Z5 4930471E19Rik-201ENSMUST00000219022 1514 ntTSL 1 (best) BASIC22.32■■□□□ 1.16
Sf3a1Q8K4Z5 Rhobtb3-201ENSMUST00000022078 4980 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
Sf3a1Q8K4Z5 Fbxo30-201ENSMUST00000070300 2492 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
Sf3a1Q8K4Z5 3110082J24Rik-201ENSMUST00000127749 327 ntAPPRIS P1 TSL 5 BASIC22.32■■□□□ 1.16
Sf3a1Q8K4Z5 Bmp6-201ENSMUST00000171970 3593 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
Sf3a1Q8K4Z5 Polr2c-201ENSMUST00000109521 1580 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
Sf3a1Q8K4Z5 Zfp385b-204ENSMUST00000111831 2734 ntAPPRIS P3 TSL 1 (best) BASIC22.32■■□□□ 1.16
Sf3a1Q8K4Z5 Atf6b-201ENSMUST00000015605 2566 ntAPPRIS P2 TSL 1 (best) BASIC22.32■■□□□ 1.16
Sf3a1Q8K4Z5 Cyp2u1-203ENSMUST00000200236 1716 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
Sf3a1Q8K4Z5 Trmt61a-201ENSMUST00000084947 2433 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
Sf3a1Q8K4Z5 Def6-201ENSMUST00000002327 2277 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
Sf3a1Q8K4Z5 Klk9-201ENSMUST00000005891 1476 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
Sf3a1Q8K4Z5 Henmt1-202ENSMUST00000098680 1466 ntAPPRIS ALT2 TSL 1 (best) BASIC22.31■■□□□ 1.16
Sf3a1Q8K4Z5 Gm15648-201ENSMUST00000149681 778 ntTSL 5 BASIC22.31■■□□□ 1.16
Sf3a1Q8K4Z5 Dennd6a-201ENSMUST00000037585 6638 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
Sf3a1Q8K4Z5 Flot1-201ENSMUST00000001569 1825 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
Sf3a1Q8K4Z5 Fgf23-201ENSMUST00000000186 1814 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
Sf3a1Q8K4Z5 Antxr1-201ENSMUST00000042025 5253 ntAPPRIS P2 TSL 1 (best) BASIC22.31■■□□□ 1.16
Sf3a1Q8K4Z5 Nadk2-201ENSMUST00000067760 3731 ntAPPRIS P5 TSL 5 BASIC22.31■■□□□ 1.16
Sf3a1Q8K4Z5 Slc25a16-201ENSMUST00000044977 3145 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
Sf3a1Q8K4Z5 Cfap206-202ENSMUST00000108136 1688 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
Sf3a1Q8K4Z5 Gm12441-201ENSMUST00000121806 588 ntBASIC22.3■■□□□ 1.16
Sf3a1Q8K4Z5 Taz-208ENSMUST00000132437 768 ntTSL 3 BASIC22.3■■□□□ 1.16
Sf3a1Q8K4Z5 Gm44672-201ENSMUST00000206944 1098 ntBASIC22.3■■□□□ 1.16
Sf3a1Q8K4Z5 CT025689.6-201ENSMUST00000224991 1104 ntBASIC22.3■■□□□ 1.16
Sf3a1Q8K4Z5 Gng10-201ENSMUST00000041160 1192 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
Sf3a1Q8K4Z5 1700018M17Rik-201ENSMUST00000052502 456 ntBASIC22.3■■□□□ 1.16
Sf3a1Q8K4Z5 Ttc32-202ENSMUST00000219470 1645 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
Sf3a1Q8K4Z5 Mdfic-202ENSMUST00000120512 1871 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
Sf3a1Q8K4Z5 Trim58-201ENSMUST00000075084 2192 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
Sf3a1Q8K4Z5 AI314180-201ENSMUST00000055822 1478 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
Sf3a1Q8K4Z5 Pgrmc2-201ENSMUST00000058578 3007 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
Sf3a1Q8K4Z5 B3gat2-202ENSMUST00000140583 1737 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
Sf3a1Q8K4Z5 Zswim8-208ENSMUST00000224751 5951 ntAPPRIS ALT2 BASIC22.29■■□□□ 1.16
Sf3a1Q8K4Z5 Vkorc1-202ENSMUST00000119922 387 ntTSL 3 BASIC22.29■■□□□ 1.16
Sf3a1Q8K4Z5 Gm20390-201ENSMUST00000170303 991 ntAPPRIS P1 TSL 5 BASIC22.29■■□□□ 1.16
Sf3a1Q8K4Z5 Naxe-201ENSMUST00000029708 908 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
Sf3a1Q8K4Z5 Bex2-201ENSMUST00000049130 903 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
Sf3a1Q8K4Z5 Tor2a-201ENSMUST00000009707 1536 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
Sf3a1Q8K4Z5 Asap2-202ENSMUST00000064595 5678 ntAPPRIS P4 TSL 5 BASIC22.29■■□□□ 1.16
Sf3a1Q8K4Z5 Map4k5-203ENSMUST00000110570 4498 ntAPPRIS P5 TSL 5 BASIC22.29■■□□□ 1.16
Sf3a1Q8K4Z5 Olig2-201ENSMUST00000035608 2437 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
Sf3a1Q8K4Z5 Tspan5-201ENSMUST00000029800 6653 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
Sf3a1Q8K4Z5 Gm42922-201ENSMUST00000195887 2078 ntBASIC22.29■■□□□ 1.16
Sf3a1Q8K4Z5 Trim67-201ENSMUST00000041106 5694 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
Sf3a1Q8K4Z5 Aup1-201ENSMUST00000092618 1769 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
Sf3a1Q8K4Z5 Rap1b-201ENSMUST00000064667 2724 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
Sf3a1Q8K4Z5 Gm44549-201ENSMUST00000208351 577 ntBASIC22.28■■□□□ 1.16
Sf3a1Q8K4Z5 AC140264.2-202ENSMUST00000218746 817 ntBASIC22.28■■□□□ 1.16
Sf3a1Q8K4Z5 Anks1b-225ENSMUST00000182966 1625 ntTSL 5 BASIC22.28■■□□□ 1.16
Sf3a1Q8K4Z5 Nptx1-201ENSMUST00000026670 5217 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
Sf3a1Q8K4Z5 Plk3-201ENSMUST00000076859 2378 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
Sf3a1Q8K4Z5 Cbx1-201ENSMUST00000018810 1824 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
Sf3a1Q8K4Z5 Tmem185a-201ENSMUST00000101506 2429 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
Sf3a1Q8K4Z5 Phldb3-204ENSMUST00000206422 2564 ntAPPRIS P1 TSL 5 BASIC22.27■■□□□ 1.16
Sf3a1Q8K4Z5 Chst3-202ENSMUST00000135158 6108 ntAPPRIS P2 TSL 5 BASIC22.27■■□□□ 1.16
Sf3a1Q8K4Z5 Bnip1-201ENSMUST00000015725 1085 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
Sf3a1Q8K4Z5 Gm45822-201ENSMUST00000212231 259 ntTSL 3 BASIC22.27■■□□□ 1.16
Sf3a1Q8K4Z5 AC061963.1-203ENSMUST00000213473 453 ntTSL 3 BASIC22.27■■□□□ 1.16
Sf3a1Q8K4Z5 Tmem42-202ENSMUST00000213514 631 ntTSL 3 BASIC22.27■■□□□ 1.16
Sf3a1Q8K4Z5 Elof1-204ENSMUST00000214394 567 ntAPPRIS P1 TSL 2 BASIC22.27■■□□□ 1.16
Sf3a1Q8K4Z5 Dnajb2-201ENSMUST00000055223 1199 ntTSL 5 BASIC22.27■■□□□ 1.16
Sf3a1Q8K4Z5 Olfr322-201ENSMUST00000072030 984 ntAPPRIS P1 BASIC22.27■■□□□ 1.16
Sf3a1Q8K4Z5 Sirt1-202ENSMUST00000105442 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC22.27■■□□□ 1.16
Sf3a1Q8K4Z5 Fam129b-201ENSMUST00000028135 3714 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
Sf3a1Q8K4Z5 Ppp1r3g-203ENSMUST00000225537 2389 ntAPPRIS P1 BASIC22.27■■□□□ 1.16
Sf3a1Q8K4Z5 2700046G09Rik-201ENSMUST00000181612 1641 ntTSL 2 BASIC22.27■■□□□ 1.16
Sf3a1Q8K4Z5 Dscc1-202ENSMUST00000110231 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC22.27■■□□□ 1.16
Sf3a1Q8K4Z5 Kcng3-201ENSMUST00000051482 3356 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
Sf3a1Q8K4Z5 Sema3c-201ENSMUST00000030568 5491 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.15
Sf3a1Q8K4Z5 Cyb5r4-201ENSMUST00000168529 2644 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.15
Sf3a1Q8K4Z5 Pkp4-210ENSMUST00000168631 4484 ntAPPRIS ALT1 TSL 1 (best) BASIC22.26■■□□□ 1.15
Sf3a1Q8K4Z5 Fam118a-201ENSMUST00000023069 2543 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
Sf3a1Q8K4Z5 Efna4-201ENSMUST00000029674 1599 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
Sf3a1Q8K4Z5 Tmem44-204ENSMUST00000140402 2405 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
Sf3a1Q8K4Z5 Gm9194-201ENSMUST00000220749 1447 ntBASIC22.26■■□□□ 1.15
Sf3a1Q8K4Z5 Cfl1-201ENSMUST00000116560 1148 ntTSL 5 BASIC22.26■■□□□ 1.15
Sf3a1Q8K4Z5 Tfam-203ENSMUST00000121685 899 ntAPPRIS ALT2 TSL 2 BASIC22.26■■□□□ 1.15
Sf3a1Q8K4Z5 Nudt8-203ENSMUST00000122924 1082 ntTSL 2 BASIC22.26■■□□□ 1.15
Sf3a1Q8K4Z5 Gm16141-201ENSMUST00000152073 790 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
Sf3a1Q8K4Z5 Gm10065-201ENSMUST00000076238 345 ntAPPRIS P1 BASIC22.26■■□□□ 1.15
Sf3a1Q8K4Z5 Smn1-202ENSMUST00000091321 223 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
Sf3a1Q8K4Z5 Pnck-202ENSMUST00000114472 1532 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
Sf3a1Q8K4Z5 Kmt5b-204ENSMUST00000113970 2975 ntAPPRIS ALT2 TSL 1 (best) BASIC22.26■■□□□ 1.15
Sf3a1Q8K4Z5 Klhl2-201ENSMUST00000034017 3412 ntAPPRIS P2 TSL 1 (best) BASIC22.25■■□□□ 1.15
Sf3a1Q8K4Z5 Mprip-203ENSMUST00000108751 4021 ntAPPRIS ALT2 TSL 1 (best) BASIC22.25■■□□□ 1.15
Sf3a1Q8K4Z5 Rock2-201ENSMUST00000020904 7644 ntAPPRIS P1 TSL 5 BASIC22.25■■□□□ 1.15
Sf3a1Q8K4Z5 Tspan2-203ENSMUST00000196611 682 ntTSL 5 BASIC22.25■■□□□ 1.15
Sf3a1Q8K4Z5 1110004E09Rik-201ENSMUST00000023694 1143 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
Sf3a1Q8K4Z5 Bricd5-201ENSMUST00000054946 997 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
Sf3a1Q8K4Z5 S1pr4-201ENSMUST00000053646 2386 ntAPPRIS P1 BASIC22.25■■□□□ 1.15
Sf3a1Q8K4Z5 Tex264-203ENSMUST00000169068 1364 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
Retrieved 100 of 76,532 protein–RNA pairs in 21.7 ms