Protein–RNA interactions for Protein: Q8K4J2

Ebf4, Transcription factor COE4, mousemouse

Predictions only

Length 599 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ebf4Q8K4J2 Sar1a-201ENSMUST00000020285 2613 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Ebf4Q8K4J2 Ly6h-206ENSMUST00000156032 752 ntAPPRIS P3 TSL 3 BASIC16.64■□□□□ 0.25
Ebf4Q8K4J2 4930539J05Rik-202ENSMUST00000182865 511 ntTSL 2 BASIC16.64■□□□□ 0.25
Ebf4Q8K4J2 Ly6h-201ENSMUST00000023241 906 ntAPPRIS ALT1 TSL 2 BASIC16.64■□□□□ 0.25
Ebf4Q8K4J2 Trim24-201ENSMUST00000031859 4042 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
Ebf4Q8K4J2 Gm19554-201ENSMUST00000220934 2076 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Ebf4Q8K4J2 St7l-201ENSMUST00000059271 5728 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
Ebf4Q8K4J2 Txnl1-201ENSMUST00000025476 2558 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Ebf4Q8K4J2 Lonrf1-201ENSMUST00000065297 3930 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
Ebf4Q8K4J2 Bean1-201ENSMUST00000093245 3199 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Ebf4Q8K4J2 Wbp1-201ENSMUST00000032111 1419 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Ebf4Q8K4J2 4930426D05Rik-202ENSMUST00000139804 1650 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Ebf4Q8K4J2 Tmem51os1-202ENSMUST00000141769 2131 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Ebf4Q8K4J2 Cdc14b-201ENSMUST00000039318 5859 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
Ebf4Q8K4J2 Vegfc-201ENSMUST00000033919 2449 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Ebf4Q8K4J2 Otud5-202ENSMUST00000115665 3821 ntTSL 5 BASIC16.63■□□□□ 0.25
Ebf4Q8K4J2 Fam98c-209ENSMUST00000164589 1293 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
Ebf4Q8K4J2 A730098A19Rik-201ENSMUST00000188193 978 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Ebf4Q8K4J2 Gm43759-201ENSMUST00000196925 1261 ntBASIC16.63■□□□□ 0.25
Ebf4Q8K4J2 Gm8969-201ENSMUST00000199694 526 ntBASIC16.63■□□□□ 0.25
Ebf4Q8K4J2 Nptx1-201ENSMUST00000026670 5217 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Ebf4Q8K4J2 Nfe2l1-202ENSMUST00000107657 3869 ntAPPRIS P3 TSL 5 BASIC16.63■□□□□ 0.25
Ebf4Q8K4J2 Dhx32-201ENSMUST00000033290 2955 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Ebf4Q8K4J2 Scamp3-202ENSMUST00000098941 1338 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Ebf4Q8K4J2 Pgk1-201ENSMUST00000081593 1825 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Ebf4Q8K4J2 Vsig10-201ENSMUST00000086464 2052 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
Ebf4Q8K4J2 Actr3-202ENSMUST00000178474 2565 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Ebf4Q8K4J2 Tarbp1-201ENSMUST00000170518 6383 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
Ebf4Q8K4J2 Krt12-201ENSMUST00000017741 1852 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Ebf4Q8K4J2 Snx25-203ENSMUST00000110378 3445 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
Ebf4Q8K4J2 Dok7-202ENSMUST00000101298 2443 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Ebf4Q8K4J2 Lrig1-201ENSMUST00000032105 4831 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Ebf4Q8K4J2 Rgl2-201ENSMUST00000047503 3252 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Ebf4Q8K4J2 Ap2m1-202ENSMUST00000090023 2080 ntAPPRIS ALT1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Ebf4Q8K4J2 Slc25a35-202ENSMUST00000102606 1828 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Ebf4Q8K4J2 Foxp1-225ENSMUST00000177229 1848 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
Ebf4Q8K4J2 Sec24d-208ENSMUST00000200333 307 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Ebf4Q8K4J2 Sin3b-203ENSMUST00000212095 1257 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Ebf4Q8K4J2 Gpr20-201ENSMUST00000064166 2144 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Ebf4Q8K4J2 Zfp691-202ENSMUST00000106355 1588 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Ebf4Q8K4J2 Fam49b-207ENSMUST00000228226 1896 ntAPPRIS P1 BASIC16.62■□□□□ 0.25
Ebf4Q8K4J2 Trim7-201ENSMUST00000046903 2161 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
Ebf4Q8K4J2 Lrrc45-201ENSMUST00000026139 2492 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Ebf4Q8K4J2 Mff-208ENSMUST00000160786 1645 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Ebf4Q8K4J2 Hnrnph3-201ENSMUST00000020263 2213 ntAPPRIS P3 TSL 5 BASIC16.62■□□□□ 0.25
Ebf4Q8K4J2 Ntmt1-201ENSMUST00000041830 1387 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Ebf4Q8K4J2 Kank3-202ENSMUST00000172649 2652 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Ebf4Q8K4J2 Cul4a-201ENSMUST00000016680 3728 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Ebf4Q8K4J2 Tasp1-201ENSMUST00000046656 2480 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Ebf4Q8K4J2 Gbe1-201ENSMUST00000023393 2846 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
Ebf4Q8K4J2 Nudt4-201ENSMUST00000020217 3210 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Ebf4Q8K4J2 Zfp692-201ENSMUST00000049353 1860 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Ebf4Q8K4J2 Sptbn4-201ENSMUST00000011895 8747 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Ebf4Q8K4J2 Hnrnph1-201ENSMUST00000069304 2225 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Ebf4Q8K4J2 Fgfr2-211ENSMUST00000120187 4311 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Ebf4Q8K4J2 Rbpj-203ENSMUST00000113865 5440 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Ebf4Q8K4J2 Pycr2-201ENSMUST00000027802 1580 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Ebf4Q8K4J2 Faim-202ENSMUST00000112911 803 ntAPPRIS ALT1 TSL 2 BASIC16.61■□□□□ 0.25
Ebf4Q8K4J2 2900079G21Rik-201ENSMUST00000139552 1139 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Ebf4Q8K4J2 Tor3a-208ENSMUST00000190607 453 ntTSL 3 BASIC16.61■□□□□ 0.25
Ebf4Q8K4J2 Gm18755-201ENSMUST00000218030 1099 ntBASIC16.61■□□□□ 0.25
Ebf4Q8K4J2 H2-D1-202ENSMUST00000172785 2102 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Ebf4Q8K4J2 Agpat3-203ENSMUST00000105388 3681 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
Ebf4Q8K4J2 Slit3-201ENSMUST00000069837 5228 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Ebf4Q8K4J2 2810474O19Rik-201ENSMUST00000046689 6066 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Ebf4Q8K4J2 Zbtb32-202ENSMUST00000108151 1775 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
Ebf4Q8K4J2 Ntn1-201ENSMUST00000021284 5738 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
Ebf4Q8K4J2 Nespas-203ENSMUST00000151472 2248 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Ebf4Q8K4J2 Tekt5-201ENSMUST00000043415 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Ebf4Q8K4J2 Gbe1-206ENSMUST00000170464 2736 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
Ebf4Q8K4J2 Cxcl14-202ENSMUST00000224801 1467 ntBASIC16.61■□□□□ 0.25
Ebf4Q8K4J2 Fam109a-203ENSMUST00000198271 2335 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Ebf4Q8K4J2 Med9-201ENSMUST00000081980 1920 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Ebf4Q8K4J2 Meis2-202ENSMUST00000074285 2844 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Ebf4Q8K4J2 Antxr1-201ENSMUST00000042025 5253 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Ebf4Q8K4J2 Ache-201ENSMUST00000024099 2186 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Ebf4Q8K4J2 Lsm1-201ENSMUST00000038421 2663 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Ebf4Q8K4J2 Usp21-202ENSMUST00000111305 2278 ntAPPRIS P2 TSL 5 BASIC16.6■□□□□ 0.25
Ebf4Q8K4J2 Pdgfa-204ENSMUST00000110897 1287 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
Ebf4Q8K4J2 Hotairm1-201ENSMUST00000129546 409 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Ebf4Q8K4J2 Gm5812-201ENSMUST00000061073 957 ntBASIC16.6■□□□□ 0.25
Ebf4Q8K4J2 Ech1-201ENSMUST00000066264 1267 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Ebf4Q8K4J2 Bloc1s4-201ENSMUST00000071949 1273 ntAPPRIS P1 BASIC16.6■□□□□ 0.25
Ebf4Q8K4J2 Sult2b1-204ENSMUST00000209739 1858 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
Ebf4Q8K4J2 Gm9194-201ENSMUST00000220749 1447 ntBASIC16.6■□□□□ 0.25
Ebf4Q8K4J2 Foxp4-203ENSMUST00000113263 3156 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
Ebf4Q8K4J2 Krtap5-2-202ENSMUST00000190456 1471 ntAPPRIS P2 BASIC16.6■□□□□ 0.25
Ebf4Q8K4J2 Zfp644-205ENSMUST00000112698 5689 ntAPPRIS P2 TSL 5 BASIC16.6■□□□□ 0.25
Ebf4Q8K4J2 Wnt10b-202ENSMUST00000166022 1594 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Ebf4Q8K4J2 Noxa1-201ENSMUST00000044018 1617 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
Ebf4Q8K4J2 Lrrc27-202ENSMUST00000106104 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Ebf4Q8K4J2 Phtf1-201ENSMUST00000055425 3060 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Ebf4Q8K4J2 Rnf157-202ENSMUST00000106398 4553 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
Ebf4Q8K4J2 Gata6-201ENSMUST00000047762 3194 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Ebf4Q8K4J2 AC121961.1-201ENSMUST00000218594 1779 ntBASIC16.59■□□□□ 0.25
Ebf4Q8K4J2 Erlin1-201ENSMUST00000071698 3228 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
Ebf4Q8K4J2 Irgc1-204ENSMUST00000205776 1835 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Ebf4Q8K4J2 Dstn-201ENSMUST00000103172 1911 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Ebf4Q8K4J2 Pitx2-207ENSMUST00000174661 1942 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
Ebf4Q8K4J2 Poglut1-201ENSMUST00000036210 2758 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Retrieved 100 of 76,532 protein–RNA pairs in 19.1 ms