Protein–RNA interactions for Protein: Q8K4G2

Col23a1, Collagen alpha-1(XXIII) chain, mousemouse

Predictions only

Length 532 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col23a1Q8K4G2 Ing4-205ENSMUST00000140131 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC22.34■■□□□ 1.17
Col23a1Q8K4G2 Gtpbp2-201ENSMUST00000024748 2966 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
Col23a1Q8K4G2 Gm26827-201ENSMUST00000181911 148 ntTSL 5 BASIC22.34■■□□□ 1.17
Col23a1Q8K4G2 Gm29518-201ENSMUST00000190858 372 ntBASIC22.34■■□□□ 1.17
Col23a1Q8K4G2 Tctex1d4-201ENSMUST00000062206 990 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
Col23a1Q8K4G2 Pink1-201ENSMUST00000030536 2375 ntAPPRIS P2 TSL 1 (best) BASIC22.34■■□□□ 1.17
Col23a1Q8K4G2 Ptges3l-202ENSMUST00000103102 1463 ntAPPRIS P2 TSL 1 (best) BASIC22.34■■□□□ 1.17
Col23a1Q8K4G2 Nrarp-201ENSMUST00000104999 2582 ntAPPRIS P1 BASIC22.34■■□□□ 1.17
Col23a1Q8K4G2 Hoxa10-202ENSMUST00000125581 2565 ntTSL 1 (best) BASIC22.34■■□□□ 1.17
Col23a1Q8K4G2 Ppp4r2-201ENSMUST00000063854 4874 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
Col23a1Q8K4G2 Ttc39c-201ENSMUST00000025294 2571 ntAPPRIS P2 TSL 1 (best) BASIC22.33■■□□□ 1.17
Col23a1Q8K4G2 Gm16061-201ENSMUST00000122167 857 ntBASIC22.33■■□□□ 1.17
Col23a1Q8K4G2 Rpl19-ps10-201ENSMUST00000205555 330 ntBASIC22.33■■□□□ 1.17
Col23a1Q8K4G2 Gm18669-201ENSMUST00000216049 778 ntBASIC22.33■■□□□ 1.17
Col23a1Q8K4G2 AC156832.2-201ENSMUST00000216217 1295 ntTSL 1 (best) BASIC22.33■■□□□ 1.17
Col23a1Q8K4G2 Calm2-201ENSMUST00000040440 1205 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
Col23a1Q8K4G2 Gmpr-201ENSMUST00000000260 1580 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.16
Col23a1Q8K4G2 Ubac1-201ENSMUST00000036509 1852 ntAPPRIS P2 TSL 1 (best) BASIC22.32■■□□□ 1.16
Col23a1Q8K4G2 Psmd8-203ENSMUST00000186182 1512 ntAPPRIS P2 TSL 1 (best) BASIC22.32■■□□□ 1.16
Col23a1Q8K4G2 Trak1-208ENSMUST00000210636 2197 ntTSL 1 (best) BASIC22.32■■□□□ 1.16
Col23a1Q8K4G2 Lhx8-205ENSMUST00000205251 1729 ntAPPRIS P1 TSL 5 BASIC22.32■■□□□ 1.16
Col23a1Q8K4G2 AC126028.2-201ENSMUST00000228100 1833 ntBASIC22.32■■□□□ 1.16
Col23a1Q8K4G2 Hsf1-201ENSMUST00000072838 2018 ntTSL 1 (best) BASIC22.32■■□□□ 1.16
Col23a1Q8K4G2 Zkscan8-202ENSMUST00000110481 728 ntTSL 2 BASIC22.32■■□□□ 1.16
Col23a1Q8K4G2 Ppp1r2-202ENSMUST00000115233 958 ntTSL 1 (best) BASIC22.32■■□□□ 1.16
Col23a1Q8K4G2 Gm5867-201ENSMUST00000063197 592 ntBASIC22.32■■□□□ 1.16
Col23a1Q8K4G2 Fam92a-201ENSMUST00000087052 1292 ntAPPRIS ALT2 TSL 1 (best) BASIC22.32■■□□□ 1.16
Col23a1Q8K4G2 Eva1c-201ENSMUST00000037539 1698 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
Col23a1Q8K4G2 Barx2-201ENSMUST00000116615 1968 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
Col23a1Q8K4G2 Ctsh-201ENSMUST00000034915 1617 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
Col23a1Q8K4G2 Cd24a-201ENSMUST00000058714 1816 ntAPPRIS P2 TSL 1 (best) BASIC22.31■■□□□ 1.16
Col23a1Q8K4G2 1810055G02Rik-201ENSMUST00000039048 1882 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
Col23a1Q8K4G2 Cyp4f41-ps-201ENSMUST00000126790 1077 ntBASIC22.31■■□□□ 1.16
Col23a1Q8K4G2 Mrps12-204ENSMUST00000171183 883 ntAPPRIS P1 TSL 2 BASIC22.31■■□□□ 1.16
Col23a1Q8K4G2 Ttc32-203ENSMUST00000219488 768 ntTSL 3 BASIC22.31■■□□□ 1.16
Col23a1Q8K4G2 Gm21559-201ENSMUST00000220638 855 ntBASIC22.31■■□□□ 1.16
Col23a1Q8K4G2 Snhg10-202ENSMUST00000222812 527 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
Col23a1Q8K4G2 Mgarp-201ENSMUST00000038154 1232 ntAPPRIS P2 TSL 1 (best) BASIC22.31■■□□□ 1.16
Col23a1Q8K4G2 Gm8587-201ENSMUST00000076538 843 ntBASIC22.31■■□□□ 1.16
Col23a1Q8K4G2 Dpf1-201ENSMUST00000049977 2309 ntAPPRIS P2 TSL 1 (best) BASIC22.31■■□□□ 1.16
Col23a1Q8K4G2 Slc9a3r2-201ENSMUST00000002572 2118 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
Col23a1Q8K4G2 Cutc-202ENSMUST00000112047 1233 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
Col23a1Q8K4G2 1500009L16Rik-201ENSMUST00000150459 1194 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
Col23a1Q8K4G2 Krt10-202ENSMUST00000211768 557 ntTSL 3 BASIC22.3■■□□□ 1.16
Col23a1Q8K4G2 Renbp-202ENSMUST00000116578 1418 ntAPPRIS P2 TSL 1 (best) BASIC22.3■■□□□ 1.16
Col23a1Q8K4G2 Gga1-201ENSMUST00000041587 3034 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
Col23a1Q8K4G2 Lsp1-202ENSMUST00000038946 1828 ntAPPRIS P3 TSL 1 (best) BASIC22.29■■□□□ 1.16
Col23a1Q8K4G2 Ntng1-207ENSMUST00000131027 1485 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
Col23a1Q8K4G2 Ntng1-209ENSMUST00000138344 1452 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
Col23a1Q8K4G2 Sap18-202ENSMUST00000111268 662 ntTSL 2 BASIC22.29■■□□□ 1.16
Col23a1Q8K4G2 Gm9694-201ENSMUST00000193347 1189 ntBASIC22.29■■□□□ 1.16
Col23a1Q8K4G2 Gm38534-201ENSMUST00000206566 1909 ntTSL 5 BASIC22.29■■□□□ 1.16
Col23a1Q8K4G2 Phospho1-201ENSMUST00000054173 1910 ntAPPRIS P1 TSL 2 BASIC22.29■■□□□ 1.16
Col23a1Q8K4G2 Cnnm1-202ENSMUST00000223787 2931 ntAPPRIS ALT2 BASIC22.29■■□□□ 1.16
Col23a1Q8K4G2 Pbx1-206ENSMUST00000176790 1828 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
Col23a1Q8K4G2 Actl6b-205ENSMUST00000139395 1592 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
Col23a1Q8K4G2 Cdc42bpg-201ENSMUST00000025681 5995 ntAPPRIS P1 TSL 5 BASIC22.28■■□□□ 1.16
Col23a1Q8K4G2 Impdh2-201ENSMUST00000081111 1858 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
Col23a1Q8K4G2 Nrxn1-213ENSMUST00000172466 2477 ntTSL 5 BASIC22.28■■□□□ 1.16
Col23a1Q8K4G2 Fgf8-205ENSMUST00000111927 843 ntAPPRIS ALT2 TSL 1 (best) BASIC22.28■■□□□ 1.16
Col23a1Q8K4G2 Bex3-202ENSMUST00000113112 826 ntAPPRIS ALT2 TSL 1 (best) BASIC22.28■■□□□ 1.16
Col23a1Q8K4G2 Pdcd5-202ENSMUST00000120714 767 ntTSL 3 BASIC22.28■■□□□ 1.16
Col23a1Q8K4G2 2310001K24Rik-202ENSMUST00000186760 740 ntTSL 2 BASIC22.28■■□□□ 1.16
Col23a1Q8K4G2 Mrpl43-201ENSMUST00000097715 1213 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
Col23a1Q8K4G2 Echs1-201ENSMUST00000026538 1557 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
Col23a1Q8K4G2 Gnl1-201ENSMUST00000087200 2848 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
Col23a1Q8K4G2 Hmces-201ENSMUST00000032141 1464 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
Col23a1Q8K4G2 Mcmbp-202ENSMUST00000119081 2347 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
Col23a1Q8K4G2 Fdps-203ENSMUST00000196709 1382 ntAPPRIS P1 TSL 5 BASIC22.27■■□□□ 1.16
Col23a1Q8K4G2 Inafm2-201ENSMUST00000149978 3053 ntAPPRIS P1 BASIC22.27■■□□□ 1.16
Col23a1Q8K4G2 Runx2-210ENSMUST00000162373 1565 ntAPPRIS ALT2 TSL 5 BASIC22.27■■□□□ 1.16
Col23a1Q8K4G2 Rtcb-201ENSMUST00000001834 2009 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
Col23a1Q8K4G2 Gm28626-201ENSMUST00000187004 520 ntTSL 2 BASIC22.27■■□□□ 1.16
Col23a1Q8K4G2 Stk11-210ENSMUST00000213772 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC22.27■■□□□ 1.16
Col23a1Q8K4G2 Lce1a2-201ENSMUST00000029530 715 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
Col23a1Q8K4G2 Syde1-201ENSMUST00000040580 3288 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
Col23a1Q8K4G2 Asph-217ENSMUST00000146441 2576 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
Col23a1Q8K4G2 Bicdl1-203ENSMUST00000118576 1874 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
Col23a1Q8K4G2 Mfsd10-201ENSMUST00000001109 1907 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
Col23a1Q8K4G2 Gapdh-202ENSMUST00000117757 1273 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
Col23a1Q8K4G2 Taar2-201ENSMUST00000079134 1020 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
Col23a1Q8K4G2 Zfp523-201ENSMUST00000002318 2710 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
Col23a1Q8K4G2 Bpifb4-202ENSMUST00000109757 2420 ntAPPRIS P2 TSL 5 BASIC22.26■■□□□ 1.15
Col23a1Q8K4G2 Irx3-201ENSMUST00000093312 2610 ntAPPRIS P4 TSL 1 (best) BASIC22.26■■□□□ 1.15
Col23a1Q8K4G2 Acot7-203ENSMUST00000105652 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC22.25■■□□□ 1.15
Col23a1Q8K4G2 Hnrnph3-203ENSMUST00000119814 682 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
Col23a1Q8K4G2 Gm9013-201ENSMUST00000132939 882 ntBASIC22.25■■□□□ 1.15
Col23a1Q8K4G2 Gm17112-201ENSMUST00000163194 432 ntTSL 3 BASIC22.25■■□□□ 1.15
Col23a1Q8K4G2 Rpl14-201ENSMUST00000165532 1009 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
Col23a1Q8K4G2 Gm29103-201ENSMUST00000191034 598 ntTSL 5 BASIC22.25■■□□□ 1.15
Col23a1Q8K4G2 Gm17808-201ENSMUST00000200859 894 ntBASIC22.25■■□□□ 1.15
Col23a1Q8K4G2 Pagr1a-203ENSMUST00000206416 558 ntTSL 3 BASIC22.25■■□□□ 1.15
Col23a1Q8K4G2 Rgcc-201ENSMUST00000022595 918 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
Col23a1Q8K4G2 S100a16-202ENSMUST00000098911 1127 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
Col23a1Q8K4G2 BC037034-201ENSMUST00000048421 2490 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
Col23a1Q8K4G2 Gpr137b-ps-203ENSMUST00000220758 1942 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
Col23a1Q8K4G2 B4galt4-205ENSMUST00000114712 2168 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
Col23a1Q8K4G2 Klhdc4-205ENSMUST00000174192 1584 ntTSL 5 BASIC22.25■■□□□ 1.15
Col23a1Q8K4G2 Sel1l3-201ENSMUST00000031090 4512 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
Col23a1Q8K4G2 Tmem241-205ENSMUST00000209859 1426 ntAPPRIS P4 TSL 1 (best) BASIC22.24■■□□□ 1.15
Retrieved 100 of 76,532 protein–RNA pairs in 23.5 ms