Protein–RNA interactions for Protein: Q8K3P5

Cnot6, CCR4-NOT transcription complex subunit 6, mousemouse

Predictions only

Length 557 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cnot6Q8K3P5 Sorcs2-201ENSMUST00000037370 5707 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Cnot6Q8K3P5 Crlf3-201ENSMUST00000061283 2396 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Cnot6Q8K3P5 Smim15-205ENSMUST00000225972 2097 ntAPPRIS P1 BASIC17.88■□□□□ 0.45
Cnot6Q8K3P5 Psmd3-201ENSMUST00000017365 2148 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Cnot6Q8K3P5 Sumo3-209ENSMUST00000174113 512 ntAPPRIS P1 TSL 2 BASIC17.88■□□□□ 0.45
Cnot6Q8K3P5 AC122828.1-201ENSMUST00000220785 489 ntTSL 3 BASIC17.88■□□□□ 0.45
Cnot6Q8K3P5 CT030146.1-201ENSMUST00000220919 217 ntBASIC17.88■□□□□ 0.45
Cnot6Q8K3P5 Vamp5-201ENSMUST00000074231 553 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Cnot6Q8K3P5 Cox18-202ENSMUST00000118816 1307 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
Cnot6Q8K3P5 Cacul1-201ENSMUST00000081790 5790 ntAPPRIS P3 TSL 1 (best) BASIC17.88■□□□□ 0.45
Cnot6Q8K3P5 Col4a3bp-201ENSMUST00000077672 2746 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Cnot6Q8K3P5 Anapc16-204ENSMUST00000182898 1852 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Cnot6Q8K3P5 Mta1-201ENSMUST00000009099 2826 ntAPPRIS ALT2 TSL 5 BASIC17.88■□□□□ 0.45
Cnot6Q8K3P5 Agfg2-202ENSMUST00000100544 2858 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
Cnot6Q8K3P5 0610038B21Rik-202ENSMUST00000184762 1524 ntBASIC17.88■□□□□ 0.45
Cnot6Q8K3P5 Smad1-202ENSMUST00000066091 3099 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Cnot6Q8K3P5 Lysmd4-209ENSMUST00000208998 2110 ntAPPRIS P2 TSL 1 (best) BASIC17.87■□□□□ 0.45
Cnot6Q8K3P5 Ctnnbip1-201ENSMUST00000030839 2674 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Cnot6Q8K3P5 Kmt5b-203ENSMUST00000113968 3216 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
Cnot6Q8K3P5 Xxylt1-201ENSMUST00000055389 2987 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Cnot6Q8K3P5 Disc1-204ENSMUST00000115885 2408 ntAPPRIS ALT2 TSL 5 BASIC17.87■□□□□ 0.45
Cnot6Q8K3P5 Disc1-202ENSMUST00000075730 2408 ntAPPRIS P3 TSL 5 BASIC17.87■□□□□ 0.45
Cnot6Q8K3P5 Gm14281-201ENSMUST00000121700 1294 ntBASIC17.87■□□□□ 0.45
Cnot6Q8K3P5 Wdr4-203ENSMUST00000167419 813 ntTSL 3 BASIC17.87■□□□□ 0.45
Cnot6Q8K3P5 Slc37a3-211ENSMUST00000202749 434 ntTSL 5 BASIC17.87■□□□□ 0.45
Cnot6Q8K3P5 Gamt-201ENSMUST00000020359 979 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Cnot6Q8K3P5 Smad5-203ENSMUST00000109876 4570 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Cnot6Q8K3P5 Sept4-206ENSMUST00000122067 1303 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Cnot6Q8K3P5 Ercc6l2-203ENSMUST00000067821 2743 ntAPPRIS P1 TSL 5 BASIC17.87■□□□□ 0.45
Cnot6Q8K3P5 Mir155hg-202ENSMUST00000185662 1362 ntTSL 5 BASIC17.87■□□□□ 0.45
Cnot6Q8K3P5 M5C1000I18Rik-202ENSMUST00000186205 1414 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Cnot6Q8K3P5 Mrpl39-201ENSMUST00000116584 2294 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Cnot6Q8K3P5 H19-202ENSMUST00000136359 2286 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Cnot6Q8K3P5 4930471E19Rik-201ENSMUST00000219022 1514 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Cnot6Q8K3P5 Ngb-203ENSMUST00000110177 1611 ntAPPRIS ALT1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Cnot6Q8K3P5 Lypd3-201ENSMUST00000080718 1649 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Cnot6Q8K3P5 Rcn1-201ENSMUST00000006128 2720 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Cnot6Q8K3P5 Ube2d-ps-204ENSMUST00000137510 1846 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Cnot6Q8K3P5 March8-202ENSMUST00000101032 4611 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Cnot6Q8K3P5 P2rx4-202ENSMUST00000081554 1887 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Cnot6Q8K3P5 Matn4-204ENSMUST00000109359 2179 ntTSL 5 BASIC17.86■□□□□ 0.45
Cnot6Q8K3P5 Gm29514-202ENSMUST00000186665 2214 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Cnot6Q8K3P5 Rcc1-201ENSMUST00000030726 2278 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Cnot6Q8K3P5 Zcchc6-207ENSMUST00000225576 2499 ntBASIC17.86■□□□□ 0.45
Cnot6Q8K3P5 Fbxl21-202ENSMUST00000121095 798 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Cnot6Q8K3P5 Pianp-204ENSMUST00000160704 1116 ntAPPRIS P2 TSL 1 (best) BASIC17.86■□□□□ 0.45
Cnot6Q8K3P5 Gm26881-201ENSMUST00000180426 593 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Cnot6Q8K3P5 Gpx1-202ENSMUST00000191997 787 ntTSL 2 BASIC17.86■□□□□ 0.45
Cnot6Q8K3P5 0610010K14Rik-202ENSMUST00000021181 779 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Cnot6Q8K3P5 Gpx1-201ENSMUST00000082429 1072 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Cnot6Q8K3P5 Dxo-201ENSMUST00000046244 1519 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Cnot6Q8K3P5 Uhrf2-201ENSMUST00000025739 3536 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Cnot6Q8K3P5 Slc35f4-201ENSMUST00000074368 1931 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Cnot6Q8K3P5 AC121598.2-201ENSMUST00000228376 2325 ntBASIC17.86■□□□□ 0.45
Cnot6Q8K3P5 Mxi1-201ENSMUST00000003870 5156 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Cnot6Q8K3P5 Msl1-204ENSMUST00000107487 2836 ntAPPRIS ALT2 TSL 2 BASIC17.85■□□□□ 0.45
Cnot6Q8K3P5 Tcp11-203ENSMUST00000114836 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
Cnot6Q8K3P5 Plppr3-207ENSMUST00000167250 3063 ntAPPRIS ALT2 TSL 2 BASIC17.85■□□□□ 0.45
Cnot6Q8K3P5 Kmt5b-216ENSMUST00000176926 1551 ntAPPRIS ALT2 TSL 5 BASIC17.85■□□□□ 0.45
Cnot6Q8K3P5 Esrrb-201ENSMUST00000021680 2136 ntAPPRIS P1 TSL 5 BASIC17.85■□□□□ 0.45
Cnot6Q8K3P5 Ptpdc1-204ENSMUST00000222028 3164 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
Cnot6Q8K3P5 Sec1-201ENSMUST00000040636 2470 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Cnot6Q8K3P5 Naa50-202ENSMUST00000063542 2136 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Cnot6Q8K3P5 Espn-205ENSMUST00000084114 1645 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Cnot6Q8K3P5 Gm10153-201ENSMUST00000084415 522 ntTSL 5 BASIC17.85■□□□□ 0.45
Cnot6Q8K3P5 Slc35d2-201ENSMUST00000099441 2303 ntAPPRIS P2 TSL 1 (best) BASIC17.85■□□□□ 0.45
Cnot6Q8K3P5 Zfp644-205ENSMUST00000112698 5689 ntAPPRIS P2 TSL 5 BASIC17.85■□□□□ 0.45
Cnot6Q8K3P5 Klf14-201ENSMUST00000101589 3056 ntAPPRIS P1 BASIC17.85■□□□□ 0.45
Cnot6Q8K3P5 Fgf4-201ENSMUST00000060336 3030 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Cnot6Q8K3P5 Ispd-201ENSMUST00000062041 2690 ntAPPRIS P2 TSL 1 (best) BASIC17.85■□□□□ 0.45
Cnot6Q8K3P5 Atp6v0a2-201ENSMUST00000037865 5345 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Cnot6Q8K3P5 Aup1-201ENSMUST00000092618 1769 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Cnot6Q8K3P5 Mrpl10-201ENSMUST00000001485 1708 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Cnot6Q8K3P5 Mcl1-201ENSMUST00000037947 3418 ntAPPRIS P2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Cnot6Q8K3P5 Snx20-201ENSMUST00000034087 1699 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Cnot6Q8K3P5 Nat14-204ENSMUST00000207687 1415 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Cnot6Q8K3P5 2310034G01Rik-201ENSMUST00000189008 1373 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
Cnot6Q8K3P5 Snhg20-202ENSMUST00000149822 593 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Cnot6Q8K3P5 Phox2b-202ENSMUST00000174251 1177 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Cnot6Q8K3P5 H2-Ke6-201ENSMUST00000045467 965 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Cnot6Q8K3P5 Tspan17-202ENSMUST00000099503 822 ntAPPRIS ALT1 TSL 5 BASIC17.84■□□□□ 0.45
Cnot6Q8K3P5 Dcun1d1-201ENSMUST00000108182 4980 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Cnot6Q8K3P5 Slc16a3-201ENSMUST00000070653 2272 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Cnot6Q8K3P5 Fam172a-202ENSMUST00000099358 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Cnot6Q8K3P5 Fcho2-208ENSMUST00000224992 2964 ntBASIC17.84■□□□□ 0.45
Cnot6Q8K3P5 Dnlz-201ENSMUST00000028295 2916 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Cnot6Q8K3P5 Lpgat1-202ENSMUST00000110856 2792 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Cnot6Q8K3P5 Pfn2-201ENSMUST00000066882 2342 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Cnot6Q8K3P5 Runx1-203ENSMUST00000168195 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.44
Cnot6Q8K3P5 Ppm1b-202ENSMUST00000112304 3262 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.44
Cnot6Q8K3P5 Mettl26-205ENSMUST00000169308 1026 ntTSL 2 BASIC17.83■□□□□ 0.44
Cnot6Q8K3P5 AV026068-208ENSMUST00000189098 286 ntTSL 5 BASIC17.83■□□□□ 0.44
Cnot6Q8K3P5 Mrpl40-201ENSMUST00000023391 1185 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Cnot6Q8K3P5 Ferd3l-201ENSMUST00000061035 886 ntAPPRIS P1 BASIC17.83■□□□□ 0.44
Cnot6Q8K3P5 Hnrnpul2-201ENSMUST00000096753 5726 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Cnot6Q8K3P5 Anks3-201ENSMUST00000023157 2483 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Cnot6Q8K3P5 Map3k10-201ENSMUST00000036453 3682 ntAPPRIS P2 TSL 1 (best) BASIC17.83■□□□□ 0.44
Cnot6Q8K3P5 1810043G02Rik-201ENSMUST00000105397 1818 ntAPPRIS P2 TSL 1 (best) BASIC17.83■□□□□ 0.44
Cnot6Q8K3P5 Pea15a-202ENSMUST00000111247 2435 ntTSL 3 BASIC17.83■□□□□ 0.44
Cnot6Q8K3P5 Ppp1cb-201ENSMUST00000015100 5962 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Retrieved 100 of 76,532 protein–RNA pairs in 25.9 ms