Protein–RNA interactions for Protein: Q8CIR4

Trpm6, Transient receptor potential cation channel subfamily M member 6, mousemouse

Predictions only

Length 2,028 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trpm6Q8CIR4 Agpat3-202ENSMUST00000105387 1316 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Trpm6Q8CIR4 Soat2-201ENSMUST00000023806 2213 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Trpm6Q8CIR4 Zcchc2-201ENSMUST00000118196 5796 ntAPPRIS P4 TSL 5 BASIC18.39■□□□□ 0.53
Trpm6Q8CIR4 Prr23a1-201ENSMUST00000170349 883 ntAPPRIS P1 BASIC18.39■□□□□ 0.53
Trpm6Q8CIR4 Gm35240-201ENSMUST00000218335 661 ntTSL 2 BASIC18.39■□□□□ 0.53
Trpm6Q8CIR4 Syngr1-202ENSMUST00000009728 819 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
Trpm6Q8CIR4 Dpf1-203ENSMUST00000108230 1553 ntTSL 5 BASIC18.38■□□□□ 0.53
Trpm6Q8CIR4 Gm43545-201ENSMUST00000196765 2779 ntBASIC18.38■□□□□ 0.53
Trpm6Q8CIR4 Ppm1j-201ENSMUST00000002298 1721 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Trpm6Q8CIR4 Aldh7a1-206ENSMUST00000172734 1880 ntTSL 5 BASIC18.38■□□□□ 0.53
Trpm6Q8CIR4 Sft2d3-201ENSMUST00000054984 2810 ntAPPRIS P1 BASIC18.38■□□□□ 0.53
Trpm6Q8CIR4 Gatad1-201ENSMUST00000007559 2545 ntAPPRIS P2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Trpm6Q8CIR4 Dusp12-201ENSMUST00000027970 1374 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Trpm6Q8CIR4 Lce1m-201ENSMUST00000029520 874 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Trpm6Q8CIR4 Uchl1-201ENSMUST00000031131 1177 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Trpm6Q8CIR4 Nkx2-3-201ENSMUST00000057178 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Trpm6Q8CIR4 Eif4h-205ENSMUST00000202622 2726 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
Trpm6Q8CIR4 Tsks-202ENSMUST00000120929 1843 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Trpm6Q8CIR4 Gm37292-201ENSMUST00000192062 758 ntBASIC18.37■□□□□ 0.53
Trpm6Q8CIR4 AC122465.1-201ENSMUST00000220813 1209 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Trpm6Q8CIR4 Prkra-201ENSMUST00000002808 1614 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Trpm6Q8CIR4 Gm26634-201ENSMUST00000181146 1511 ntTSL 5 BASIC18.37■□□□□ 0.53
Trpm6Q8CIR4 Slc35f4-202ENSMUST00000123534 2748 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Trpm6Q8CIR4 Slc39a5-202ENSMUST00000167859 2025 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Trpm6Q8CIR4 Lingo1-203ENSMUST00000114256 2782 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Trpm6Q8CIR4 Ccnd3-218ENSMUST00000183177 2060 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
Trpm6Q8CIR4 Aen-202ENSMUST00000107423 2230 ntAPPRIS P3 TSL 5 BASIC18.37■□□□□ 0.53
Trpm6Q8CIR4 Lsp1-204ENSMUST00000105967 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Trpm6Q8CIR4 Dtnb-225ENSMUST00000174663 2381 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
Trpm6Q8CIR4 4930432B10Rik-202ENSMUST00000181330 1612 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Trpm6Q8CIR4 Comtd1-204ENSMUST00000177527 714 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
Trpm6Q8CIR4 Tomm20-202ENSMUST00000212771 458 ntTSL 2 BASIC18.37■□□□□ 0.53
Trpm6Q8CIR4 AC121577.1-201ENSMUST00000227302 707 ntBASIC18.37■□□□□ 0.53
Trpm6Q8CIR4 Dcxr-201ENSMUST00000026144 892 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Trpm6Q8CIR4 Rapgef3-207ENSMUST00000134885 1422 ntTSL 5 BASIC18.37■□□□□ 0.53
Trpm6Q8CIR4 Pacsin3-203ENSMUST00000111349 1993 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Trpm6Q8CIR4 Hapln2-201ENSMUST00000005014 1711 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Trpm6Q8CIR4 Kirrel-201ENSMUST00000041732 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Trpm6Q8CIR4 Isca1-201ENSMUST00000057115 1942 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Trpm6Q8CIR4 Chmp7-201ENSMUST00000036381 2649 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Trpm6Q8CIR4 Fzd8-201ENSMUST00000041080 3346 ntAPPRIS P1 BASIC18.36■□□□□ 0.53
Trpm6Q8CIR4 Zfp428-203ENSMUST00000177205 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Trpm6Q8CIR4 Btg1-202ENSMUST00000218953 668 ntTSL 2 BASIC18.36■□□□□ 0.53
Trpm6Q8CIR4 Sec11c-201ENSMUST00000025394 807 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Trpm6Q8CIR4 Rae1-201ENSMUST00000029013 1742 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Trpm6Q8CIR4 Src-203ENSMUST00000109529 2020 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Trpm6Q8CIR4 Cenpa-205ENSMUST00000144742 1466 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Trpm6Q8CIR4 Bmp8a-202ENSMUST00000102641 1917 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
Trpm6Q8CIR4 Gpr137b-ps-203ENSMUST00000220758 1942 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Trpm6Q8CIR4 Smad2-205ENSMUST00000168423 2857 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
Trpm6Q8CIR4 Tekt1-203ENSMUST00000108503 1397 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Trpm6Q8CIR4 Ccdc112-201ENSMUST00000072835 2801 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
Trpm6Q8CIR4 Dnaja4-201ENSMUST00000070070 3003 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Trpm6Q8CIR4 Timm23-208ENSMUST00000226683 750 ntBASIC18.35■□□□□ 0.53
Trpm6Q8CIR4 AC130671.1-201ENSMUST00000227384 1237 ntBASIC18.35■□□□□ 0.53
Trpm6Q8CIR4 Gm10273-201ENSMUST00000092511 1126 ntAPPRIS P1 BASIC18.35■□□□□ 0.53
Trpm6Q8CIR4 Gorasp2-202ENSMUST00000112201 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Trpm6Q8CIR4 Pgrmc2-201ENSMUST00000058578 3007 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Trpm6Q8CIR4 Slc25a10-201ENSMUST00000026899 2023 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Trpm6Q8CIR4 Neurl4-213ENSMUST00000177476 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Trpm6Q8CIR4 Ube2cbp-201ENSMUST00000034986 1790 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Trpm6Q8CIR4 Twist2-202ENSMUST00000186075 2525 ntAPPRIS P1 BASIC18.35■□□□□ 0.53
Trpm6Q8CIR4 4732471J01Rik-202ENSMUST00000205787 991 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Trpm6Q8CIR4 Gnb5-201ENSMUST00000076889 1188 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Trpm6Q8CIR4 Gm26860-201ENSMUST00000181674 1489 ntTSL 5 BASIC18.35■□□□□ 0.53
Trpm6Q8CIR4 Ruvbl1-201ENSMUST00000032165 1675 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Trpm6Q8CIR4 Sos2-206ENSMUST00000183277 4512 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
Trpm6Q8CIR4 4930560O18Rik-201ENSMUST00000207051 1595 ntBASIC18.34■□□□□ 0.53
Trpm6Q8CIR4 Osbp-201ENSMUST00000025590 4578 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
Trpm6Q8CIR4 Papd7-202ENSMUST00000198607 4750 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Trpm6Q8CIR4 Dpys-202ENSMUST00000110306 2110 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Trpm6Q8CIR4 Phgr1-202ENSMUST00000130293 542 ntAPPRIS P2 TSL 5 BASIC18.34■□□□□ 0.53
Trpm6Q8CIR4 U2af1-201ENSMUST00000014684 907 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
Trpm6Q8CIR4 U2af1-202ENSMUST00000166526 907 ntAPPRIS ALT2 TSL 2 BASIC18.34■□□□□ 0.53
Trpm6Q8CIR4 Cib1-207ENSMUST00000206084 772 ntTSL 3 BASIC18.34■□□□□ 0.53
Trpm6Q8CIR4 Fitm1-201ENSMUST00000022826 971 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Trpm6Q8CIR4 Zfpl1-201ENSMUST00000025707 1287 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Trpm6Q8CIR4 Cib1-202ENSMUST00000071457 702 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Trpm6Q8CIR4 Gm26689-201ENSMUST00000180927 1818 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Trpm6Q8CIR4 Gm26553-201ENSMUST00000181531 1818 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Trpm6Q8CIR4 Cdkl3-203ENSMUST00000109076 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Trpm6Q8CIR4 Thegl-202ENSMUST00000117880 1641 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Trpm6Q8CIR4 Btnl9-202ENSMUST00000066531 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Trpm6Q8CIR4 Fam71b-201ENSMUST00000063166 2185 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Trpm6Q8CIR4 Sirt1-201ENSMUST00000020257 3905 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
Trpm6Q8CIR4 2210408F21Rik-208ENSMUST00000144612 450 ntTSL 3 BASIC18.33■□□□□ 0.53
Trpm6Q8CIR4 AC156016.1-201ENSMUST00000227190 1035 ntBASIC18.33■□□□□ 0.53
Trpm6Q8CIR4 Atp6v1b1-206ENSMUST00000206911 1591 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
Trpm6Q8CIR4 Gm8668-201ENSMUST00000120559 1447 ntBASIC18.33■□□□□ 0.53
Trpm6Q8CIR4 Ghitm-201ENSMUST00000042564 2573 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Trpm6Q8CIR4 Zcchc2-202ENSMUST00000119166 6368 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.53
Trpm6Q8CIR4 Arhgap42-203ENSMUST00000183182 1458 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Trpm6Q8CIR4 Golga7b-202ENSMUST00000122375 2836 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Trpm6Q8CIR4 Mtcp1-201ENSMUST00000033542 1592 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Trpm6Q8CIR4 Fkbp3-201ENSMUST00000021332 1022 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Trpm6Q8CIR4 Coa6-201ENSMUST00000059093 747 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Trpm6Q8CIR4 Slc35g2-201ENSMUST00000093792 1590 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
Trpm6Q8CIR4 3110070M22Rik-201ENSMUST00000099148 1123 ntAPPRIS P1 BASIC18.32■□□□□ 0.52
Trpm6Q8CIR4 Glrb-201ENSMUST00000029654 3029 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Trpm6Q8CIR4 Ndufv1-202ENSMUST00000128787 1436 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
Retrieved 100 of 76,532 protein–RNA pairs in 33.5 ms