Protein–RNA interactions for Protein: Q8CII8

Syne4, Nesprin-4, mousemouse

Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Syne4Q8CII8 Zbed3-202ENSMUST00000221807 1945 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Syne4Q8CII8 Isca1-201ENSMUST00000057115 1942 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Syne4Q8CII8 Lyzl4-202ENSMUST00000120918 959 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Syne4Q8CII8 Prss16-204ENSMUST00000150547 1159 ntTSL 3 BASIC20.75■□□□□ 0.91
Syne4Q8CII8 Gm3764-209ENSMUST00000181550 1093 ntTSL 3 BASIC20.75■□□□□ 0.91
Syne4Q8CII8 Guca1a-201ENSMUST00000059348 871 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Syne4Q8CII8 Mknk2-205ENSMUST00000200082 3439 ntAPPRIS P2 TSL 1 (best) BASIC20.75■□□□□ 0.91
Syne4Q8CII8 B3gat2-202ENSMUST00000140583 1737 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Syne4Q8CII8 Zyg11a-202ENSMUST00000106690 2421 ntAPPRIS ALT2 TSL 5 BASIC20.75■□□□□ 0.91
Syne4Q8CII8 Cenpa-205ENSMUST00000144742 1466 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Syne4Q8CII8 Anks1b-225ENSMUST00000182966 1625 ntTSL 5 BASIC20.75■□□□□ 0.91
Syne4Q8CII8 Sh2b2-204ENSMUST00000196447 1783 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Syne4Q8CII8 C030014I23Rik-201ENSMUST00000080911 1810 ntBASIC20.74■□□□□ 0.91
Syne4Q8CII8 Best2-201ENSMUST00000059072 1971 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Syne4Q8CII8 Fam105a-201ENSMUST00000100739 2867 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Syne4Q8CII8 Josd2-206ENSMUST00000121922 684 ntTSL 5 BASIC20.74■□□□□ 0.91
Syne4Q8CII8 1810062O18Rik-202ENSMUST00000128848 745 ntTSL 3 BASIC20.74■□□□□ 0.91
Syne4Q8CII8 Gm5475-201ENSMUST00000132119 2608 ntAPPRIS P5 TSL 1 (best) BASIC20.74■□□□□ 0.91
Syne4Q8CII8 Rnpep-201ENSMUST00000074357 2171 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Syne4Q8CII8 Mfsd10-201ENSMUST00000001109 1907 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Syne4Q8CII8 Gm43006-201ENSMUST00000197702 1602 ntBASIC20.74■□□□□ 0.91
Syne4Q8CII8 Ubtf-201ENSMUST00000006754 3213 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
Syne4Q8CII8 1700003E16Rik-201ENSMUST00000032106 2020 ntAPPRIS P1 TSL 5 BASIC20.73■□□□□ 0.91
Syne4Q8CII8 Gm14968-201ENSMUST00000155528 769 ntTSL 3 BASIC20.73■□□□□ 0.91
Syne4Q8CII8 Ccdc58-202ENSMUST00000163352 970 ntTSL 3 BASIC20.73■□□□□ 0.91
Syne4Q8CII8 Ccdc58-203ENSMUST00000164916 1096 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Syne4Q8CII8 Trmt61a-202ENSMUST00000168338 2131 ntAPPRIS P1 TSL 5 BASIC20.73■□□□□ 0.91
Syne4Q8CII8 Gm42738-201ENSMUST00000201813 439 ntTSL 3 BASIC20.73■□□□□ 0.91
Syne4Q8CII8 Hsbp1-202ENSMUST00000212468 638 ntAPPRIS P1 TSL 2 BASIC20.73■□□□□ 0.91
Syne4Q8CII8 Ntpcr-201ENSMUST00000034313 1155 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Syne4Q8CII8 4930465K10Rik-201ENSMUST00000056675 1238 ntBASIC20.73■□□□□ 0.91
Syne4Q8CII8 Zfp524-201ENSMUST00000086349 1142 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Syne4Q8CII8 Gm20634-201ENSMUST00000090779 2956 ntBASIC20.73■□□□□ 0.91
Syne4Q8CII8 Fcmr-201ENSMUST00000038829 1600 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Syne4Q8CII8 Arfrp1-203ENSMUST00000127988 2447 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Syne4Q8CII8 Kctd9-201ENSMUST00000078053 3157 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Syne4Q8CII8 Lzic-201ENSMUST00000030842 1817 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Syne4Q8CII8 Gm10013-201ENSMUST00000106074 672 ntBASIC20.72■□□□□ 0.91
Syne4Q8CII8 B230208B08Rik-201ENSMUST00000173049 404 ntTSL 3 BASIC20.72■□□□□ 0.91
Syne4Q8CII8 Gm9745-201ENSMUST00000021573 684 ntAPPRIS P1 TSL 5 BASIC20.72■□□□□ 0.91
Syne4Q8CII8 Lysmd2-201ENSMUST00000034702 1189 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Syne4Q8CII8 Rprml-201ENSMUST00000057870 1010 ntAPPRIS P1 BASIC20.72■□□□□ 0.91
Syne4Q8CII8 Fbxw2-203ENSMUST00000113075 2260 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Syne4Q8CII8 Atmin-201ENSMUST00000109099 4877 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Syne4Q8CII8 Gfra3-201ENSMUST00000025224 1992 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Syne4Q8CII8 Kdm3b-201ENSMUST00000043775 6363 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Syne4Q8CII8 Cracr2b-201ENSMUST00000053670 1698 ntAPPRIS P2 TSL 1 (best) BASIC20.71■□□□□ 0.91
Syne4Q8CII8 Cpne7-201ENSMUST00000037900 2398 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Syne4Q8CII8 Irx3-201ENSMUST00000093312 2610 ntAPPRIS P4 TSL 1 (best) BASIC20.71■□□□□ 0.91
Syne4Q8CII8 Syt8-202ENSMUST00000105976 1289 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
Syne4Q8CII8 Syt8-205ENSMUST00000122393 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
Syne4Q8CII8 Gm28793-201ENSMUST00000190845 413 ntTSL 5 BASIC20.71■□□□□ 0.91
Syne4Q8CII8 Nkx2-9-201ENSMUST00000072631 1264 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Syne4Q8CII8 Adrb1-201ENSMUST00000038949 2491 ntAPPRIS P1 BASIC20.71■□□□□ 0.91
Syne4Q8CII8 Ube2cbp-201ENSMUST00000034986 1790 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Syne4Q8CII8 Elf2-212ENSMUST00000194641 5919 ntAPPRIS P3 TSL 5 BASIC20.71■□□□□ 0.91
Syne4Q8CII8 Gm10654-201ENSMUST00000098653 1633 ntBASIC20.71■□□□□ 0.91
Syne4Q8CII8 Acp5-204ENSMUST00000213815 1419 ntAPPRIS P1 TSL 5 BASIC20.7■□□□□ 0.9
Syne4Q8CII8 Acp5-206ENSMUST00000217643 1447 ntAPPRIS P1 TSL 5 BASIC20.7■□□□□ 0.9
Syne4Q8CII8 BC037034-205ENSMUST00000159649 2093 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Syne4Q8CII8 Smim12-201ENSMUST00000142029 1022 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Syne4Q8CII8 Gm27741-201ENSMUST00000185060 237 ntBASIC20.7■□□□□ 0.9
Syne4Q8CII8 Grtp1-204ENSMUST00000209691 1030 ntTSL 5 BASIC20.7■□□□□ 0.9
Syne4Q8CII8 Gfra4-202ENSMUST00000066958 783 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
Syne4Q8CII8 Map2k2-207ENSMUST00000143517 2405 ntAPPRIS P3 TSL 1 (best) BASIC20.7■□□□□ 0.9
Syne4Q8CII8 Hapln2-201ENSMUST00000005014 1711 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Syne4Q8CII8 Tmem145-202ENSMUST00000119703 1781 ntAPPRIS ALT2 TSL 5 BASIC20.69■□□□□ 0.9
Syne4Q8CII8 Dtnb-210ENSMUST00000173199 2820 ntAPPRIS ALT2 TSL 5 BASIC20.69■□□□□ 0.9
Syne4Q8CII8 B4galt4-205ENSMUST00000114712 2168 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Syne4Q8CII8 Ssx2ip-203ENSMUST00000106151 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
Syne4Q8CII8 Myd88-201ENSMUST00000035092 1960 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Syne4Q8CII8 Arnt-204ENSMUST00000107160 783 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Syne4Q8CII8 Tlcd2-202ENSMUST00000108435 1112 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
Syne4Q8CII8 Gm12085-201ENSMUST00000119263 940 ntBASIC20.69■□□□□ 0.9
Syne4Q8CII8 AA414768-201ENSMUST00000121924 1257 ntBASIC20.69■□□□□ 0.9
Syne4Q8CII8 5430402O13Rik-201ENSMUST00000126537 869 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Syne4Q8CII8 Rps2-ps2-201ENSMUST00000194305 881 ntBASIC20.69■□□□□ 0.9
Syne4Q8CII8 Zpbp2-202ENSMUST00000081033 1300 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Syne4Q8CII8 Eml4-203ENSMUST00000112363 5238 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
Syne4Q8CII8 Slc25a4-201ENSMUST00000034049 1925 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Syne4Q8CII8 Pick1-201ENSMUST00000018295 1977 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Syne4Q8CII8 Tesmin-204ENSMUST00000151341 2013 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Syne4Q8CII8 Rae1-201ENSMUST00000029013 1742 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Syne4Q8CII8 Tmem60-201ENSMUST00000115259 1147 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Syne4Q8CII8 Gm6345-202ENSMUST00000180900 204 ntBASIC20.68■□□□□ 0.9
Syne4Q8CII8 Gm27463-201ENSMUST00000183569 57 ntBASIC20.68■□□□□ 0.9
Syne4Q8CII8 Gm10517-202ENSMUST00000192970 758 ntBASIC20.68■□□□□ 0.9
Syne4Q8CII8 Gm45058-201ENSMUST00000205810 766 ntBASIC20.68■□□□□ 0.9
Syne4Q8CII8 Spata33-206ENSMUST00000212637 569 ntAPPRIS ALT2 TSL 2 BASIC20.68■□□□□ 0.9
Syne4Q8CII8 Gm18032-201ENSMUST00000222541 538 ntBASIC20.68■□□□□ 0.9
Syne4Q8CII8 Gm44544-201ENSMUST00000207052 1844 ntBASIC20.68■□□□□ 0.9
Syne4Q8CII8 Fiz1-204ENSMUST00000207030 2178 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Syne4Q8CII8 Neo1-202ENSMUST00000214547 5414 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
Syne4Q8CII8 Arrb2-204ENSMUST00000102564 1848 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Syne4Q8CII8 Mvb12b-201ENSMUST00000041555 4998 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Syne4Q8CII8 Gm26829-201ENSMUST00000180581 934 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Syne4Q8CII8 Gm26938-201ENSMUST00000182839 744 ntAPPRIS P1 TSL 3 BASIC20.67■□□□□ 0.9
Syne4Q8CII8 Vpreb1-201ENSMUST00000075017 766 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Syne4Q8CII8 Gnb5-201ENSMUST00000076889 1188 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Syne4Q8CII8 1300014J16Rik-201ENSMUST00000219015 1337 ntBASIC20.67■□□□□ 0.9
Retrieved 100 of 76,532 protein–RNA pairs in 22.7 ms