Protein–RNA interactions for Protein: Q8CI96

Clip4, CAP-Gly domain-containing linker protein 4, mousemouse

Predictions only

Length 704 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clip4Q8CI96 Tgfb1-201ENSMUST00000002678 2175 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Clip4Q8CI96 9330171B17Rik-201ENSMUST00000035939 2073 ntBASIC18.35■□□□□ 0.53
Clip4Q8CI96 Ubr5-201ENSMUST00000110336 9242 ntTSL 5 BASIC18.35■□□□□ 0.53
Clip4Q8CI96 Qpct-201ENSMUST00000040789 1924 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Clip4Q8CI96 Lrch3-208ENSMUST00000165616 1875 ntTSL 5 BASIC18.35■□□□□ 0.53
Clip4Q8CI96 Oxct2a-201ENSMUST00000102640 1760 ntAPPRIS P1 BASIC18.35■□□□□ 0.53
Clip4Q8CI96 Gm4675-202ENSMUST00000164755 2322 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Clip4Q8CI96 Ntn1-201ENSMUST00000021284 5738 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
Clip4Q8CI96 St7l-201ENSMUST00000059271 5728 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
Clip4Q8CI96 Slc25a10-201ENSMUST00000026899 2023 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Clip4Q8CI96 Tex30-212ENSMUST00000152239 1046 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Clip4Q8CI96 Hist1h2ao-201ENSMUST00000091745 480 ntAPPRIS P1 BASIC18.34■□□□□ 0.53
Clip4Q8CI96 1600012H06Rik-201ENSMUST00000052691 2506 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Clip4Q8CI96 Gm45141-201ENSMUST00000206502 1888 ntBASIC18.34■□□□□ 0.53
Clip4Q8CI96 Eps8-203ENSMUST00000111878 3560 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Clip4Q8CI96 Dus3l-201ENSMUST00000007747 2303 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Clip4Q8CI96 Smarca4-201ENSMUST00000034707 6354 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
Clip4Q8CI96 Ak5-201ENSMUST00000045262 3323 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Clip4Q8CI96 Matk-204ENSMUST00000120265 1618 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
Clip4Q8CI96 Uri1-201ENSMUST00000085513 3441 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Clip4Q8CI96 Nrxn2-203ENSMUST00000113459 3285 ntTSL 2 BASIC18.33■□□□□ 0.53
Clip4Q8CI96 Fbxo7-202ENSMUST00000117597 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.53
Clip4Q8CI96 Golga7-201ENSMUST00000051094 1792 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Clip4Q8CI96 Otud7a-201ENSMUST00000058476 3483 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Clip4Q8CI96 Pts-208ENSMUST00000215416 439 ntTSL 2 BASIC18.33■□□□□ 0.52
Clip4Q8CI96 Rragd-203ENSMUST00000098190 5008 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.52
Clip4Q8CI96 Leng1-201ENSMUST00000019878 2222 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Clip4Q8CI96 Rbm11-202ENSMUST00000114249 2750 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
Clip4Q8CI96 B3galnt2-207ENSMUST00000221974 2439 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Clip4Q8CI96 Pacs2-207ENSMUST00000223502 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Clip4Q8CI96 Gm12933-201ENSMUST00000120203 872 ntBASIC18.32■□□□□ 0.52
Clip4Q8CI96 Ccdc85b-201ENSMUST00000179549 609 ntAPPRIS P1 BASIC18.32■□□□□ 0.52
Clip4Q8CI96 6230400D17Rik-202ENSMUST00000224976 1019 ntBASIC18.32■□□□□ 0.52
Clip4Q8CI96 Arl10-201ENSMUST00000026988 1046 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Clip4Q8CI96 Cyp4f15-204ENSMUST00000168171 2168 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
Clip4Q8CI96 Slc35a2-203ENSMUST00000115663 1527 ntAPPRIS P4 TSL 2 BASIC18.32■□□□□ 0.52
Clip4Q8CI96 Blcap-201ENSMUST00000088494 2108 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Clip4Q8CI96 Tbx2-201ENSMUST00000000095 3626 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Clip4Q8CI96 Slain2-202ENSMUST00000144843 4833 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Clip4Q8CI96 Fam53a-202ENSMUST00000065119 2009 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Clip4Q8CI96 Pik3r2-201ENSMUST00000034296 3165 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Clip4Q8CI96 Unc50-201ENSMUST00000027285 1414 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Clip4Q8CI96 Mark3-201ENSMUST00000075281 3321 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Clip4Q8CI96 Pitx1-201ENSMUST00000021968 2451 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Clip4Q8CI96 Gm10655-201ENSMUST00000098658 1397 ntBASIC18.31■□□□□ 0.52
Clip4Q8CI96 Gm42900-201ENSMUST00000197184 2167 ntBASIC18.31■□□□□ 0.52
Clip4Q8CI96 Gorasp2-202ENSMUST00000112201 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Clip4Q8CI96 Ccdc6-203ENSMUST00000147545 5511 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
Clip4Q8CI96 Tmem203-201ENSMUST00000104998 854 ntAPPRIS P1 BASIC18.31■□□□□ 0.52
Clip4Q8CI96 S100a6-201ENSMUST00000001051 731 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Clip4Q8CI96 Smim1-209ENSMUST00000145527 562 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
Clip4Q8CI96 Gm30085-201ENSMUST00000209694 594 ntTSL 3 BASIC18.31■□□□□ 0.52
Clip4Q8CI96 Tceanc2-201ENSMUST00000030362 935 ntAPPRIS P1 TSL 3 BASIC18.31■□□□□ 0.52
Clip4Q8CI96 Gm15853-202ENSMUST00000195518 2041 ntBASIC18.31■□□□□ 0.52
Clip4Q8CI96 Snrnp70-201ENSMUST00000074575 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Clip4Q8CI96 Gm37811-201ENSMUST00000192416 2601 ntBASIC18.31■□□□□ 0.52
Clip4Q8CI96 AC122335.2-201ENSMUST00000213901 6181 ntBASIC18.31■□□□□ 0.52
Clip4Q8CI96 Zfp444-203ENSMUST00000108566 1648 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Clip4Q8CI96 Tmem198-201ENSMUST00000050899 2456 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Clip4Q8CI96 Zfp644-205ENSMUST00000112698 5689 ntAPPRIS P2 TSL 5 BASIC18.3■□□□□ 0.52
Clip4Q8CI96 Mael-201ENSMUST00000038782 1546 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Clip4Q8CI96 Mxi1-201ENSMUST00000003870 5156 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Clip4Q8CI96 Mrpl52-201ENSMUST00000010550 418 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Clip4Q8CI96 Gm15155-201ENSMUST00000112542 1009 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Clip4Q8CI96 Gm12216-203ENSMUST00000121435 655 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
Clip4Q8CI96 A830035A12Rik-201ENSMUST00000147445 861 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Clip4Q8CI96 Gm6420-201ENSMUST00000193885 723 ntBASIC18.3■□□□□ 0.52
Clip4Q8CI96 Krtcap3-205ENSMUST00000201625 902 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
Clip4Q8CI96 Smarcc1-207ENSMUST00000199896 5773 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Clip4Q8CI96 Dxo-211ENSMUST00000180043 1447 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
Clip4Q8CI96 Ndufa10-201ENSMUST00000027478 2020 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Clip4Q8CI96 Gm26694-201ENSMUST00000180868 1902 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Clip4Q8CI96 Pno1-201ENSMUST00000020317 1544 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Clip4Q8CI96 Sptbn4-201ENSMUST00000011895 8747 ntAPPRIS P2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Clip4Q8CI96 C1qtnf12-201ENSMUST00000024338 1315 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Clip4Q8CI96 Zbtb5-204ENSMUST00000180217 4708 ntAPPRIS P1 TSL 2 BASIC18.29■□□□□ 0.52
Clip4Q8CI96 Trak1-209ENSMUST00000210798 5363 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Clip4Q8CI96 Ubtf-206ENSMUST00000107123 2759 ntAPPRIS P3 TSL 5 BASIC18.29■□□□□ 0.52
Clip4Q8CI96 Myo1b-203ENSMUST00000114537 4618 ntTSL 5 BASIC18.29■□□□□ 0.52
Clip4Q8CI96 Gm42555-201ENSMUST00000199304 1039 ntBASIC18.29■□□□□ 0.52
Clip4Q8CI96 Gucd1-211ENSMUST00000219774 806 ntTSL 3 BASIC18.29■□□□□ 0.52
Clip4Q8CI96 Ndufa5-201ENSMUST00000023851 875 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Clip4Q8CI96 Nptxr-201ENSMUST00000023057 5004 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Clip4Q8CI96 Cables1-201ENSMUST00000046948 3202 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
Clip4Q8CI96 AC123834.2-201ENSMUST00000224038 2340 ntBASIC18.29■□□□□ 0.52
Clip4Q8CI96 Keap1-206ENSMUST00000216436 2498 ntAPPRIS ALT2 TSL 5 BASIC18.29■□□□□ 0.52
Clip4Q8CI96 D16Ertd472e-202ENSMUST00000114219 1576 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Clip4Q8CI96 Prss12-201ENSMUST00000029603 2602 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Clip4Q8CI96 Tial1-201ENSMUST00000033135 1580 ntAPPRIS ALT1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Clip4Q8CI96 Klhdc1-201ENSMUST00000063445 2620 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Clip4Q8CI96 Prmt9-202ENSMUST00000118622 2768 ntAPPRIS ALT2 TSL 5 BASIC18.29■□□□□ 0.52
Clip4Q8CI96 Prmt9-201ENSMUST00000056237 2781 ntAPPRIS P2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Clip4Q8CI96 Scn1b-203ENSMUST00000211945 1501 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
Clip4Q8CI96 Nptx1-201ENSMUST00000026670 5217 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Clip4Q8CI96 Ube2d-ps-204ENSMUST00000137510 1846 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Clip4Q8CI96 Runx1-203ENSMUST00000168195 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Clip4Q8CI96 Hspa5-202ENSMUST00000100171 2613 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Clip4Q8CI96 Cebpg-202ENSMUST00000130491 4709 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Clip4Q8CI96 Hsp25-ps1-201ENSMUST00000109187 630 ntBASIC18.28■□□□□ 0.52
Clip4Q8CI96 Vax2-201ENSMUST00000037807 1242 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Retrieved 100 of 76,532 protein–RNA pairs in 24.6 ms