Protein–RNA interactions for Protein: Q8CG47

Smc4, Structural maintenance of chromosomes protein 4, mousemouse

Predictions only

Length 1,286 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc4Q8CG47 Gm38285-201ENSMUST00000192928 922 ntBASIC22.51■■□□□ 1.19
Smc4Q8CG47 Aif1l-201ENSMUST00000001920 3117 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
Smc4Q8CG47 Cd83-201ENSMUST00000015540 2477 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
Smc4Q8CG47 Negr1-202ENSMUST00000074015 4983 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
Smc4Q8CG47 Smad2-205ENSMUST00000168423 2857 ntAPPRIS P3 TSL 1 (best) BASIC22.51■■□□□ 1.19
Smc4Q8CG47 Tmem145-202ENSMUST00000119703 1781 ntAPPRIS ALT2 TSL 5 BASIC22.5■■□□□ 1.19
Smc4Q8CG47 Src-203ENSMUST00000109529 2020 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
Smc4Q8CG47 9530068E07Rik-202ENSMUST00000109057 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC22.5■■□□□ 1.19
Smc4Q8CG47 Dbr1-201ENSMUST00000066650 2261 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
Smc4Q8CG47 Fam98b-201ENSMUST00000028825 1861 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
Smc4Q8CG47 Dpys-202ENSMUST00000110306 2110 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
Smc4Q8CG47 Arpc4-202ENSMUST00000171058 695 ntTSL 5 BASIC22.5■■□□□ 1.19
Smc4Q8CG47 Alkbh1-212ENSMUST00000185301 408 ntBASIC22.5■■□□□ 1.19
Smc4Q8CG47 Ghrhr-202ENSMUST00000203241 1328 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
Smc4Q8CG47 Wnk2-205ENSMUST00000110097 6882 ntAPPRIS ALT2 TSL 5 BASIC22.5■■□□□ 1.19
Smc4Q8CG47 Wnk2-203ENSMUST00000091623 6897 ntAPPRIS P4 TSL 5 BASIC22.5■■□□□ 1.19
Smc4Q8CG47 Chst7-201ENSMUST00000044138 2206 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
Smc4Q8CG47 Csrp2-201ENSMUST00000020403 1384 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
Smc4Q8CG47 AL591207.1-203ENSMUST00000222401 1380 ntTSL 5 BASIC22.5■■□□□ 1.19
Smc4Q8CG47 Gnb2-204ENSMUST00000111027 1610 ntTSL 5 BASIC22.49■■□□□ 1.19
Smc4Q8CG47 Galnt11-201ENSMUST00000045737 2552 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
Smc4Q8CG47 Clcn4-206ENSMUST00000210594 2539 ntAPPRIS ALT2 TSL 5 BASIC22.49■■□□□ 1.19
Smc4Q8CG47 2900072N19Rik-201ENSMUST00000123840 806 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
Smc4Q8CG47 Gm17035-201ENSMUST00000170557 419 ntTSL 3 BASIC22.49■■□□□ 1.19
Smc4Q8CG47 Ccnd2-202ENSMUST00000201066 983 ntTSL 2 BASIC22.49■■□□□ 1.19
Smc4Q8CG47 Trappc6a-201ENSMUST00000002112 785 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
Smc4Q8CG47 AC154649.1-201ENSMUST00000227392 384 ntBASIC22.49■■□□□ 1.19
Smc4Q8CG47 H2-Eb1-201ENSMUST00000074557 1184 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
Smc4Q8CG47 Snx4-201ENSMUST00000023502 2442 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
Smc4Q8CG47 Gm19531-201ENSMUST00000216737 1377 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
Smc4Q8CG47 Leng1-201ENSMUST00000019878 2222 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
Smc4Q8CG47 Map4k5-203ENSMUST00000110570 4498 ntAPPRIS P5 TSL 5 BASIC22.48■■□□□ 1.19
Smc4Q8CG47 St7l-201ENSMUST00000059271 5728 ntAPPRIS P3 TSL 1 (best) BASIC22.48■■□□□ 1.19
Smc4Q8CG47 Pon1-201ENSMUST00000002663 1513 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
Smc4Q8CG47 Nova2-202ENSMUST00000220302 8372 ntAPPRIS P1 TSL 5 BASIC22.48■■□□□ 1.19
Smc4Q8CG47 Nova2-201ENSMUST00000032571 8372 ntTSL 5 BASIC22.48■■□□□ 1.19
Smc4Q8CG47 Fam213a-202ENSMUST00000118466 1567 ntAPPRIS ALT1 TSL 1 (best) BASIC22.48■■□□□ 1.19
Smc4Q8CG47 5330438D12Rik-201ENSMUST00000064101 2229 ntBASIC22.48■■□□□ 1.19
Smc4Q8CG47 Gusb-202ENSMUST00000111307 932 ntTSL 1 (best) BASIC22.48■■□□□ 1.19
Smc4Q8CG47 Npm3-ps1-201ENSMUST00000119728 528 ntBASIC22.48■■□□□ 1.19
Smc4Q8CG47 Gm45148-201ENSMUST00000208578 513 ntTSL 5 BASIC22.48■■□□□ 1.19
Smc4Q8CG47 Tpsb2-201ENSMUST00000069616 1081 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
Smc4Q8CG47 Npm3-201ENSMUST00000070215 888 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
Smc4Q8CG47 Tpd52l1-201ENSMUST00000000305 1308 ntAPPRIS P2 TSL 1 (best) BASIC22.48■■□□□ 1.19
Smc4Q8CG47 Mrpl3-205ENSMUST00000149243 2309 ntTSL 1 (best) BASIC22.48■■□□□ 1.19
Smc4Q8CG47 Ascl1-201ENSMUST00000020243 2481 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
Smc4Q8CG47 Sco1-202ENSMUST00000108690 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC22.48■■□□□ 1.19
Smc4Q8CG47 Cbx1-201ENSMUST00000018810 1824 ntTSL 1 (best) BASIC22.47■■□□□ 1.19
Smc4Q8CG47 Thumpd2-201ENSMUST00000025093 1856 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
Smc4Q8CG47 Fam3c-205ENSMUST00000165576 2826 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
Smc4Q8CG47 D030062O11Rik-201ENSMUST00000192660 2806 ntBASIC22.47■■□□□ 1.19
Smc4Q8CG47 Tmem132d-201ENSMUST00000044441 6139 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
Smc4Q8CG47 Gm13181-201ENSMUST00000120117 1069 ntBASIC22.47■■□□□ 1.19
Smc4Q8CG47 Kcnn4-203ENSMUST00000205626 461 ntTSL 5 BASIC22.47■■□□□ 1.19
Smc4Q8CG47 Arhgef33-211ENSMUST00000225658 473 ntBASIC22.47■■□□□ 1.19
Smc4Q8CG47 Aprt-201ENSMUST00000006764 849 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
Smc4Q8CG47 Keap1-204ENSMUST00000193982 2163 ntAPPRIS P2 TSL 1 (best) BASIC22.47■■□□□ 1.19
Smc4Q8CG47 Fam78b-205ENSMUST00000165874 4986 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
Smc4Q8CG47 Galnt3-201ENSMUST00000028378 3885 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
Smc4Q8CG47 Ahcyl1-201ENSMUST00000029490 3863 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
Smc4Q8CG47 Ccdc85c-202ENSMUST00000222310 4298 ntAPPRIS P2 TSL 5 BASIC22.46■■□□□ 1.19
Smc4Q8CG47 Gm11747-201ENSMUST00000142751 1648 ntTSL 1 (best) BASIC22.46■■□□□ 1.19
Smc4Q8CG47 Stk35-201ENSMUST00000165413 2882 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
Smc4Q8CG47 Gm10138-203ENSMUST00000206952 366 ntBASIC22.46■■□□□ 1.19
Smc4Q8CG47 Gm10252-201ENSMUST00000209541 832 ntBASIC22.46■■□□□ 1.19
Smc4Q8CG47 Auh-203ENSMUST00000119311 2627 ntTSL 1 (best) BASIC22.46■■□□□ 1.19
Smc4Q8CG47 Dkk4-201ENSMUST00000033936 1315 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
Smc4Q8CG47 Gm45906-201ENSMUST00000208911 1430 ntBASIC22.46■■□□□ 1.19
Smc4Q8CG47 Gm9194-201ENSMUST00000220749 1447 ntBASIC22.46■■□□□ 1.19
Smc4Q8CG47 Sos1-201ENSMUST00000068714 8919 ntAPPRIS P1 TSL 2 BASIC22.46■■□□□ 1.19
Smc4Q8CG47 Gm11532-201ENSMUST00000128111 5272 ntTSL 1 (best) BASIC22.45■■□□□ 1.19
Smc4Q8CG47 Eva1a-201ENSMUST00000042974 1773 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.19
Smc4Q8CG47 Swsap1-201ENSMUST00000053583 1838 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.19
Smc4Q8CG47 Aamp-201ENSMUST00000006462 1817 ntAPPRIS P3 TSL 1 (best) BASIC22.45■■□□□ 1.19
Smc4Q8CG47 Rab5c-202ENSMUST00000107364 1915 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
Smc4Q8CG47 Gpr137b-ps-203ENSMUST00000220758 1942 ntTSL 1 (best) BASIC22.45■■□□□ 1.18
Smc4Q8CG47 Uck1-201ENSMUST00000002625 2005 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
Smc4Q8CG47 Syt3-203ENSMUST00000120262 2096 ntAPPRIS P1 TSL 5 BASIC22.45■■□□□ 1.18
Smc4Q8CG47 Gm6576-201ENSMUST00000169678 883 ntBASIC22.45■■□□□ 1.18
Smc4Q8CG47 Gm10698-201ENSMUST00000182663 604 ntBASIC22.45■■□□□ 1.18
Smc4Q8CG47 Eloc-203ENSMUST00000185771 742 ntAPPRIS P1 TSL 5 BASIC22.45■■□□□ 1.18
Smc4Q8CG47 Gabarapl1-202ENSMUST00000204487 902 ntTSL 1 (best) BASIC22.45■■□□□ 1.18
Smc4Q8CG47 Prss21-201ENSMUST00000024928 1094 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
Smc4Q8CG47 Wbp1-202ENSMUST00000113936 1314 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
Smc4Q8CG47 Fzr1-205ENSMUST00000140901 3057 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
Smc4Q8CG47 Relb-202ENSMUST00000094762 2209 ntAPPRIS P3 TSL 1 (best) BASIC22.45■■□□□ 1.18
Smc4Q8CG47 Relb-203ENSMUST00000098754 2203 ntAPPRIS ALT2 TSL 5 BASIC22.45■■□□□ 1.18
Smc4Q8CG47 Rcc1-202ENSMUST00000084250 2285 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
Smc4Q8CG47 Bmp8a-202ENSMUST00000102641 1917 ntAPPRIS P3 TSL 1 (best) BASIC22.44■■□□□ 1.18
Smc4Q8CG47 Gm16192-201ENSMUST00000148357 937 ntTSL 1 (best) BASIC22.44■■□□□ 1.18
Smc4Q8CG47 Dtnb-225ENSMUST00000174663 2381 ntAPPRIS ALT2 TSL 5 BASIC22.44■■□□□ 1.18
Smc4Q8CG47 Tfdp2-209ENSMUST00000188750 1713 ntAPPRIS ALT2 TSL 5 BASIC22.44■■□□□ 1.18
Smc4Q8CG47 Gm19391-201ENSMUST00000196653 999 ntTSL 3 BASIC22.44■■□□□ 1.18
Smc4Q8CG47 Dhrs7-201ENSMUST00000021512 1385 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
Smc4Q8CG47 Aqp2-201ENSMUST00000023752 1416 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
Smc4Q8CG47 Mtag2-201ENSMUST00000058665 714 ntBASIC22.44■■□□□ 1.18
Smc4Q8CG47 Tmem179-201ENSMUST00000066791 2380 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
Smc4Q8CG47 Zfp706-201ENSMUST00000078976 4417 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
Smc4Q8CG47 Polr3gl-201ENSMUST00000091924 1427 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
Smc4Q8CG47 Ttyh3-201ENSMUST00000042661 4658 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
Retrieved 100 of 76,532 protein–RNA pairs in 27.4 ms