Protein–RNA interactions for Protein: Q8CDG3

Vcpip1, Deubiquitinating protein VCIP135, mousemouse

Predictions only

Length 1,220 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vcpip1Q8CDG3 Snap91-201ENSMUST00000036347 4237 ntAPPRIS ALT2 TSL 5 BASIC19.62■□□□□ 0.73
Vcpip1Q8CDG3 Slc5a10-201ENSMUST00000051552 2261 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Vcpip1Q8CDG3 Hhipl1-201ENSMUST00000021685 5174 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Vcpip1Q8CDG3 Gm43702-201ENSMUST00000198772 2546 ntBASIC19.61■□□□□ 0.73
Vcpip1Q8CDG3 Npepl1-201ENSMUST00000044415 2467 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Vcpip1Q8CDG3 Dhps-201ENSMUST00000078665 1333 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Vcpip1Q8CDG3 Gm38308-201ENSMUST00000194934 1809 ntBASIC19.61■□□□□ 0.73
Vcpip1Q8CDG3 Prcd-205ENSMUST00000178875 1227 ntTSL 5 BASIC19.61■□□□□ 0.73
Vcpip1Q8CDG3 Gm27011-201ENSMUST00000182352 972 ntBASIC19.61■□□□□ 0.73
Vcpip1Q8CDG3 Olfr718-ps1-204ENSMUST00000218872 963 ntAPPRIS ALT2 BASIC19.61■□□□□ 0.73
Vcpip1Q8CDG3 Pard3-219ENSMUST00000162309 5659 ntAPPRIS P3 TSL 1 (best) BASIC19.61■□□□□ 0.73
Vcpip1Q8CDG3 Hoxc6-201ENSMUST00000001711 1581 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Vcpip1Q8CDG3 Usp13-202ENSMUST00000108228 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
Vcpip1Q8CDG3 Clasp2-204ENSMUST00000213663 2727 ntTSL 5 BASIC19.6■□□□□ 0.73
Vcpip1Q8CDG3 Zbtb11os1-201ENSMUST00000186480 1350 ntBASIC19.6■□□□□ 0.73
Vcpip1Q8CDG3 Arl4d-201ENSMUST00000039388 1382 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Vcpip1Q8CDG3 Serbp1-211ENSMUST00000204293 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
Vcpip1Q8CDG3 Dbnl-203ENSMUST00000109845 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
Vcpip1Q8CDG3 Slc35g1-201ENSMUST00000054098 3471 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Vcpip1Q8CDG3 Nrros-203ENSMUST00000115165 2389 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
Vcpip1Q8CDG3 Gm10849-201ENSMUST00000100397 618 ntBASIC19.6■□□□□ 0.73
Vcpip1Q8CDG3 Rfc5-202ENSMUST00000111953 772 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Vcpip1Q8CDG3 Mpc1-208ENSMUST00000155364 958 ntAPPRIS P1 TSL 2 BASIC19.6■□□□□ 0.73
Vcpip1Q8CDG3 Tmbim4-201ENSMUST00000020446 904 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Vcpip1Q8CDG3 Nfib-206ENSMUST00000107248 3294 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Vcpip1Q8CDG3 Ankrd39-201ENSMUST00000001172 2109 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Vcpip1Q8CDG3 Arid3c-204ENSMUST00000171251 1751 ntAPPRIS P3 TSL 5 BASIC19.6■□□□□ 0.73
Vcpip1Q8CDG3 Plekhh1-201ENSMUST00000039928 6439 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Vcpip1Q8CDG3 Prdm6-203ENSMUST00000115399 2227 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
Vcpip1Q8CDG3 Gpx4-202ENSMUST00000105372 959 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Vcpip1Q8CDG3 Gm38165-201ENSMUST00000191654 486 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Vcpip1Q8CDG3 Cox4i1-201ENSMUST00000034276 745 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Vcpip1Q8CDG3 Chrac1-201ENSMUST00000089765 871 ntAPPRIS P2 TSL 1 (best) BASIC19.59■□□□□ 0.73
Vcpip1Q8CDG3 Gm45447-201ENSMUST00000209874 1805 ntTSL 5 BASIC19.59■□□□□ 0.73
Vcpip1Q8CDG3 Stk3-201ENSMUST00000018476 2914 ntAPPRIS P2 TSL 1 (best) BASIC19.59■□□□□ 0.73
Vcpip1Q8CDG3 Zdhhc1-201ENSMUST00000044286 1737 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Vcpip1Q8CDG3 Acot5-202ENSMUST00000072505 1401 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Vcpip1Q8CDG3 Gmcl1-201ENSMUST00000001185 2949 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Vcpip1Q8CDG3 Zfp768-201ENSMUST00000060783 2356 ntAPPRIS P2 TSL 1 (best) BASIC19.58■□□□□ 0.73
Vcpip1Q8CDG3 Panx2-203ENSMUST00000162424 3391 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Vcpip1Q8CDG3 Gm12356-201ENSMUST00000122854 353 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
Vcpip1Q8CDG3 A830035A12Rik-201ENSMUST00000147445 861 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
Vcpip1Q8CDG3 Uncx-202ENSMUST00000174792 1196 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
Vcpip1Q8CDG3 Cyyr1-204ENSMUST00000175700 1294 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
Vcpip1Q8CDG3 Tmem42-202ENSMUST00000213514 631 ntTSL 3 BASIC19.58■□□□□ 0.72
Vcpip1Q8CDG3 Grifin-201ENSMUST00000042993 613 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Vcpip1Q8CDG3 Dmrt2-201ENSMUST00000053068 2347 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Vcpip1Q8CDG3 Prss12-201ENSMUST00000029603 2602 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Vcpip1Q8CDG3 Fbxo47-201ENSMUST00000093939 2162 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Vcpip1Q8CDG3 Pfn2-201ENSMUST00000066882 2342 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Vcpip1Q8CDG3 Rbms1-209ENSMUST00000164147 2543 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Vcpip1Q8CDG3 Galnt1-206ENSMUST00000170243 4108 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Vcpip1Q8CDG3 Mrpl52-201ENSMUST00000010550 418 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Vcpip1Q8CDG3 Neurl1b-203ENSMUST00000183077 1084 ntTSL 5 BASIC19.57■□□□□ 0.72
Vcpip1Q8CDG3 Sohlh1-201ENSMUST00000076989 1289 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Vcpip1Q8CDG3 Rpl21-203ENSMUST00000099272 1067 ntAPPRIS P1 TSL 3 BASIC19.57■□□□□ 0.72
Vcpip1Q8CDG3 Nfix-201ENSMUST00000076715 1403 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Vcpip1Q8CDG3 Nlgn2-202ENSMUST00000108634 5568 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Vcpip1Q8CDG3 Gm3164-201ENSMUST00000168866 1945 ntAPPRIS P1 TSL 5 BASIC19.57■□□□□ 0.72
Vcpip1Q8CDG3 Asap2-203ENSMUST00000090834 5097 ntTSL 5 BASIC19.56■□□□□ 0.72
Vcpip1Q8CDG3 Lins1-203ENSMUST00000121777 2729 ntAPPRIS P3 TSL 2 BASIC19.56■□□□□ 0.72
Vcpip1Q8CDG3 Arrb2-204ENSMUST00000102564 1848 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Vcpip1Q8CDG3 CT025689.6-201ENSMUST00000224991 1104 ntBASIC19.56■□□□□ 0.72
Vcpip1Q8CDG3 Smim15-205ENSMUST00000225972 2097 ntAPPRIS P1 BASIC19.56■□□□□ 0.72
Vcpip1Q8CDG3 Agap3-205ENSMUST00000199856 2685 ntTSL 5 BASIC19.56■□□□□ 0.72
Vcpip1Q8CDG3 Il15ra-201ENSMUST00000078834 1600 ntAPPRIS P3 TSL 5 BASIC19.55■□□□□ 0.72
Vcpip1Q8CDG3 Dlg1-202ENSMUST00000064477 4663 ntAPPRIS P3 TSL 1 (best) BASIC19.55■□□□□ 0.72
Vcpip1Q8CDG3 Gm8773-201ENSMUST00000101627 1268 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Vcpip1Q8CDG3 Gm15558-201ENSMUST00000126849 2018 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Vcpip1Q8CDG3 Gm37805-201ENSMUST00000192612 1094 ntBASIC19.55■□□□□ 0.72
Vcpip1Q8CDG3 AC165249.1-201ENSMUST00000220031 1599 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Vcpip1Q8CDG3 Grrp1-201ENSMUST00000060050 1226 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Vcpip1Q8CDG3 Hspa1l-201ENSMUST00000007248 2472 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Vcpip1Q8CDG3 Dus3l-201ENSMUST00000007747 2303 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Vcpip1Q8CDG3 Arhgap23-203ENSMUST00000121799 5816 ntAPPRIS P1 TSL 5 BASIC19.55■□□□□ 0.72
Vcpip1Q8CDG3 Lysmd4-209ENSMUST00000208998 2110 ntAPPRIS P2 TSL 1 (best) BASIC19.55■□□□□ 0.72
Vcpip1Q8CDG3 Hmx2-202ENSMUST00000183219 1546 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Vcpip1Q8CDG3 Cyth2-201ENSMUST00000056820 2527 ntAPPRIS ALT1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Vcpip1Q8CDG3 C1ql3-201ENSMUST00000061545 2535 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Vcpip1Q8CDG3 Gm16262-201ENSMUST00000162306 1751 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Vcpip1Q8CDG3 Rab40c-207ENSMUST00000167626 2506 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Vcpip1Q8CDG3 Rd3-201ENSMUST00000175680 1969 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Vcpip1Q8CDG3 Peli2-201ENSMUST00000073150 5900 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Vcpip1Q8CDG3 Gls-202ENSMUST00000114510 5596 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
Vcpip1Q8CDG3 Tsc22d4-205ENSMUST00000110985 790 ntAPPRIS ALT2 TSL 2 BASIC19.54■□□□□ 0.72
Vcpip1Q8CDG3 Dlx6-203ENSMUST00000171311 1071 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Vcpip1Q8CDG3 Emc9-201ENSMUST00000022828 855 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Vcpip1Q8CDG3 Neurog1-201ENSMUST00000058475 1686 ntAPPRIS P1 BASIC19.54■□□□□ 0.72
Vcpip1Q8CDG3 Syt7-203ENSMUST00000169121 6834 ntTSL 5 BASIC19.54■□□□□ 0.72
Vcpip1Q8CDG3 Mrpl15-203ENSMUST00000130201 1894 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Vcpip1Q8CDG3 Nfatc2-205ENSMUST00000137451 2369 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Vcpip1Q8CDG3 Negr1-201ENSMUST00000041425 2095 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Vcpip1Q8CDG3 Esco1-202ENSMUST00000097670 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
Vcpip1Q8CDG3 Golga7-202ENSMUST00000121783 1945 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Vcpip1Q8CDG3 Ndufv1-202ENSMUST00000128787 1436 ntAPPRIS ALT2 TSL 5 BASIC19.53■□□□□ 0.72
Vcpip1Q8CDG3 Ndufv1-207ENSMUST00000134479 1438 ntTSL 5 BASIC19.53■□□□□ 0.72
Vcpip1Q8CDG3 Gfer-201ENSMUST00000046839 1775 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Vcpip1Q8CDG3 1810059C17Rik-201ENSMUST00000125173 487 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Vcpip1Q8CDG3 Whrn-205ENSMUST00000095038 2665 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Vcpip1Q8CDG3 Lyrm4-201ENSMUST00000053265 2086 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Retrieved 100 of 76,532 protein–RNA pairs in 26 ms