Protein–RNA interactions for Protein: Q8CC84

Lysmd4, LysM and putative peptidoglycan-binding domain-containing protein 4, mousemouse

Predictions only

Length 293 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lysmd4Q8CC84 Slc35g1-201ENSMUST00000054098 3471 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Lysmd4Q8CC84 Ubac2-201ENSMUST00000039803 2139 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Lysmd4Q8CC84 Ak5-201ENSMUST00000045262 3323 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Lysmd4Q8CC84 Ythdf3-201ENSMUST00000108345 5102 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Lysmd4Q8CC84 Adap2-201ENSMUST00000021050 1785 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Lysmd4Q8CC84 Asnsd1-201ENSMUST00000027264 2442 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Lysmd4Q8CC84 Nfil3-201ENSMUST00000071065 2026 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Lysmd4Q8CC84 Rnf44-204ENSMUST00000125871 4292 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Lysmd4Q8CC84 Eml2-203ENSMUST00000120595 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Lysmd4Q8CC84 Stard3-201ENSMUST00000018311 2070 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Lysmd4Q8CC84 Il17re-201ENSMUST00000053569 1898 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Lysmd4Q8CC84 Lancl2-201ENSMUST00000050077 2509 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Lysmd4Q8CC84 Col4a3bp-202ENSMUST00000109444 5285 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Lysmd4Q8CC84 Gm15867-201ENSMUST00000159407 388 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Lysmd4Q8CC84 Jph1-201ENSMUST00000038382 4809 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Lysmd4Q8CC84 Ntn1-201ENSMUST00000021284 5738 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
Lysmd4Q8CC84 Wnt6-201ENSMUST00000006716 2071 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Lysmd4Q8CC84 Esco1-202ENSMUST00000097670 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Lysmd4Q8CC84 Obsl1-202ENSMUST00000113567 5679 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Lysmd4Q8CC84 Stac2-201ENSMUST00000017544 3050 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Lysmd4Q8CC84 Glrx2-210ENSMUST00000185362 3337 ntAPPRIS P4 TSL 1 (best) BASIC16.37■□□□□ 0.21
Lysmd4Q8CC84 Gm8309-201ENSMUST00000206627 1448 ntBASIC16.37■□□□□ 0.21
Lysmd4Q8CC84 Ispd-201ENSMUST00000062041 2690 ntAPPRIS P2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Lysmd4Q8CC84 Stx4a-201ENSMUST00000033075 1456 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Lysmd4Q8CC84 C230096K16Rik-201ENSMUST00000198074 1722 ntBASIC16.37■□□□□ 0.21
Lysmd4Q8CC84 Ostm1-201ENSMUST00000040718 3006 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Lysmd4Q8CC84 Rcc1-201ENSMUST00000030726 2278 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Lysmd4Q8CC84 Gm12356-201ENSMUST00000122854 353 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Lysmd4Q8CC84 Cdk19os-202ENSMUST00000143103 1124 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Lysmd4Q8CC84 Gas5-217ENSMUST00000161005 430 ntTSL 5 BASIC16.37■□□□□ 0.21
Lysmd4Q8CC84 9530036O11Rik-201ENSMUST00000180878 876 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Lysmd4Q8CC84 Scand1-201ENSMUST00000079125 759 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Lysmd4Q8CC84 Vsig10-201ENSMUST00000086464 2052 ntAPPRIS ALT2 TSL 5 BASIC16.37■□□□□ 0.21
Lysmd4Q8CC84 Atp9a-211ENSMUST00000178504 3668 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
Lysmd4Q8CC84 Ahr-202ENSMUST00000116436 5548 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Lysmd4Q8CC84 Sept4-206ENSMUST00000122067 1303 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Lysmd4Q8CC84 Diras1-201ENSMUST00000055125 2953 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Lysmd4Q8CC84 Arpc1a-201ENSMUST00000031625 1632 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Lysmd4Q8CC84 B3gnt9-202ENSMUST00000136822 2516 ntAPPRIS P1 BASIC16.37■□□□□ 0.21
Lysmd4Q8CC84 Arpc4-201ENSMUST00000156898 2270 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Lysmd4Q8CC84 Scaf8-201ENSMUST00000076734 4869 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Lysmd4Q8CC84 Ogfod2-202ENSMUST00000119269 1474 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Lysmd4Q8CC84 Esrrb-201ENSMUST00000021680 2136 ntAPPRIS P1 TSL 5 BASIC16.36■□□□□ 0.21
Lysmd4Q8CC84 Mxi1-201ENSMUST00000003870 5156 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Lysmd4Q8CC84 Hps4-201ENSMUST00000035279 2836 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Lysmd4Q8CC84 Syce3-201ENSMUST00000109314 448 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Lysmd4Q8CC84 Polr3gl-204ENSMUST00000145001 607 ntTSL 3 BASIC16.36■□□□□ 0.21
Lysmd4Q8CC84 Fbxl15-202ENSMUST00000177667 1243 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Lysmd4Q8CC84 Mrpl39-201ENSMUST00000116584 2294 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Lysmd4Q8CC84 Cdca3-201ENSMUST00000024270 1976 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Lysmd4Q8CC84 Lrrc58-201ENSMUST00000078717 8604 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Lysmd4Q8CC84 Lhx2-203ENSMUST00000143783 1696 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Lysmd4Q8CC84 Haus8-201ENSMUST00000035960 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
Lysmd4Q8CC84 Elmo2-204ENSMUST00000103088 3052 ntAPPRIS ALT2 TSL 5 BASIC16.36■□□□□ 0.21
Lysmd4Q8CC84 Vegfc-201ENSMUST00000033919 2449 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Lysmd4Q8CC84 Lsm6-201ENSMUST00000051867 2107 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Lysmd4Q8CC84 Egln2-202ENSMUST00000108382 1756 ntAPPRIS P1 TSL 5 BASIC16.36■□□□□ 0.21
Lysmd4Q8CC84 Fxyd6-203ENSMUST00000217381 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Lysmd4Q8CC84 M5C1000I18Rik-202ENSMUST00000186205 1414 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Lysmd4Q8CC84 Ccdc6-203ENSMUST00000147545 5511 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
Lysmd4Q8CC84 Camk1-201ENSMUST00000032409 1496 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Lysmd4Q8CC84 Tmco4-202ENSMUST00000050949 3318 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Lysmd4Q8CC84 1700065D16Rik-204ENSMUST00000189348 1540 ntTSL 2 BASIC16.35■□□□□ 0.21
Lysmd4Q8CC84 Art5-201ENSMUST00000094128 1518 ntAPPRIS P1 TSL 2 BASIC16.35■□□□□ 0.21
Lysmd4Q8CC84 Wt1-205ENSMUST00000143043 3090 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Lysmd4Q8CC84 Lpgat1-202ENSMUST00000110856 2792 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Lysmd4Q8CC84 3110043O21Rik-203ENSMUST00000108127 3193 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Lysmd4Q8CC84 Dhx36-201ENSMUST00000029336 5620 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Lysmd4Q8CC84 Stum-202ENSMUST00000179826 601 ntAPPRIS ALT1 TSL 5 BASIC16.35■□□□□ 0.21
Lysmd4Q8CC84 Olfr718-ps1-204ENSMUST00000218872 963 ntAPPRIS ALT2 BASIC16.35■□□□□ 0.21
Lysmd4Q8CC84 Xxylt1-201ENSMUST00000055389 2987 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Lysmd4Q8CC84 Kcnj4-201ENSMUST00000057801 2148 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Lysmd4Q8CC84 Gpx4-201ENSMUST00000097227 995 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Lysmd4Q8CC84 Serbp1-211ENSMUST00000204293 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Lysmd4Q8CC84 Best2-203ENSMUST00000209421 2212 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Lysmd4Q8CC84 Fam98a-201ENSMUST00000112507 2817 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Lysmd4Q8CC84 Unc50-201ENSMUST00000027285 1414 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Lysmd4Q8CC84 Txndc15-201ENSMUST00000021959 1527 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Lysmd4Q8CC84 Plppr3-207ENSMUST00000167250 3063 ntAPPRIS ALT2 TSL 2 BASIC16.34■□□□□ 0.21
Lysmd4Q8CC84 Atp11a-202ENSMUST00000091237 7443 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
Lysmd4Q8CC84 Zfp800-203ENSMUST00000115321 2699 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Lysmd4Q8CC84 Nt5c3b-204ENSMUST00000107398 1635 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Lysmd4Q8CC84 Lrch2-201ENSMUST00000112819 4892 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
Lysmd4Q8CC84 Cep57-208ENSMUST00000147115 2262 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Lysmd4Q8CC84 Baiap2-202ENSMUST00000075180 3518 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Lysmd4Q8CC84 Porcn-202ENSMUST00000082320 1883 ntAPPRIS ALT1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Lysmd4Q8CC84 Gm10382-201ENSMUST00000100700 1233 ntAPPRIS P1 BASIC16.34■□□□□ 0.21
Lysmd4Q8CC84 Gon7-201ENSMUST00000173969 1152 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Lysmd4Q8CC84 Plac9b-203ENSMUST00000184142 1040 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Lysmd4Q8CC84 Gm11175-202ENSMUST00000211380 408 ntTSL 3 BASIC16.34■□□□□ 0.21
Lysmd4Q8CC84 Sap18b-201ENSMUST00000074053 789 ntAPPRIS P1 BASIC16.34■□□□□ 0.21
Lysmd4Q8CC84 Gm26795-201ENSMUST00000180993 1952 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Lysmd4Q8CC84 Gm43034-201ENSMUST00000198678 1364 ntBASIC16.34■□□□□ 0.21
Lysmd4Q8CC84 Tbc1d13-201ENSMUST00000044556 3595 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Lysmd4Q8CC84 Ocel1-202ENSMUST00000110051 2179 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Lysmd4Q8CC84 Gm43548-201ENSMUST00000197139 2353 ntBASIC16.34■□□□□ 0.21
Lysmd4Q8CC84 Prob1-203ENSMUST00000190196 4888 ntAPPRIS P1 BASIC16.34■□□□□ 0.21
Lysmd4Q8CC84 Ppm1b-202ENSMUST00000112304 3262 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
Lysmd4Q8CC84 Camta1-204ENSMUST00000105670 4961 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Lysmd4Q8CC84 Akp3-201ENSMUST00000044878 1680 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Retrieved 100 of 76,532 protein–RNA pairs in 55.6 ms