Protein–RNA interactions for Protein: Q8CC35

Synpo, Synaptopodin, mousemouse

Known RBP Predictions only

Length 929 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SynpoQ8CC35 Hs6st1-201ENSMUST00000088174 3719 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
SynpoQ8CC35 Gm13148-201ENSMUST00000118892 745 ntBASIC17.62■□□□□ 0.41
SynpoQ8CC35 Gm6211-202ENSMUST00000167849 925 ntBASIC17.62■□□□□ 0.41
SynpoQ8CC35 Nudt14-201ENSMUST00000002881 734 ntTSL 2 BASIC17.62■□□□□ 0.41
SynpoQ8CC35 1700028I16Rik-201ENSMUST00000076984 1048 ntTSL 5 BASIC17.62■□□□□ 0.41
SynpoQ8CC35 Cyb5d2-201ENSMUST00000079681 2393 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
SynpoQ8CC35 AB124611-202ENSMUST00000086361 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
SynpoQ8CC35 Tmem131-208ENSMUST00000194563 6698 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
SynpoQ8CC35 Ttyh3-202ENSMUST00000197452 4576 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
SynpoQ8CC35 Dcaf5-201ENSMUST00000054145 5706 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
SynpoQ8CC35 Atp6v0a2-201ENSMUST00000037865 5345 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
SynpoQ8CC35 Csf1-203ENSMUST00000120243 2097 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
SynpoQ8CC35 Irak1bp1-202ENSMUST00000113245 2158 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
SynpoQ8CC35 Tub-201ENSMUST00000033341 5997 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
SynpoQ8CC35 Nt5dc3-201ENSMUST00000099396 5952 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
SynpoQ8CC35 Otud5-201ENSMUST00000033494 4259 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
SynpoQ8CC35 Ism1-202ENSMUST00000184404 2964 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
SynpoQ8CC35 Larp6-201ENSMUST00000038407 2440 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
SynpoQ8CC35 Tle4-202ENSMUST00000167776 4545 ntAPPRIS ALT1 TSL 5 BASIC17.61■□□□□ 0.41
SynpoQ8CC35 Fbxo30-201ENSMUST00000070300 2492 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
SynpoQ8CC35 Zbtb5-204ENSMUST00000180217 4708 ntAPPRIS P1 TSL 2 BASIC17.61■□□□□ 0.41
SynpoQ8CC35 Atp9a-203ENSMUST00000109176 3691 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
SynpoQ8CC35 Hmgn2-204ENSMUST00000105893 973 ntTSL 3 BASIC17.61■□□□□ 0.41
SynpoQ8CC35 2300009A05Rik-201ENSMUST00000168665 595 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
SynpoQ8CC35 Rabac1-203ENSMUST00000205871 986 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
SynpoQ8CC35 P2ry2-204ENSMUST00000207916 2372 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
SynpoQ8CC35 Aifm2-201ENSMUST00000067857 1442 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
SynpoQ8CC35 Mex3b-201ENSMUST00000082237 3355 ntAPPRIS P1 TSL 2 BASIC17.61■□□□□ 0.41
SynpoQ8CC35 Nrm-201ENSMUST00000074259 1466 ntAPPRIS P2 TSL 1 (best) BASIC17.61■□□□□ 0.41
SynpoQ8CC35 Atp11a-201ENSMUST00000033818 7549 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
SynpoQ8CC35 Eif4g3-202ENSMUST00000084214 6139 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
SynpoQ8CC35 Cacnb3-201ENSMUST00000003442 2819 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
SynpoQ8CC35 Ube2b-202ENSMUST00000109086 585 ntAPPRIS P1 TSL 2 BASIC17.6■□□□□ 0.41
SynpoQ8CC35 Immp2l-203ENSMUST00000134965 977 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
SynpoQ8CC35 Gm16764-202ENSMUST00000148931 433 ntTSL 5 BASIC17.6■□□□□ 0.41
SynpoQ8CC35 Mcl1-202ENSMUST00000178686 858 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
SynpoQ8CC35 2810405F15Rik-201ENSMUST00000195368 932 ntBASIC17.6■□□□□ 0.41
SynpoQ8CC35 Slc7a6os-201ENSMUST00000035925 1246 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
SynpoQ8CC35 BC107364-201ENSMUST00000093126 1159 ntAPPRIS P4 TSL 1 (best) BASIC17.6■□□□□ 0.41
SynpoQ8CC35 Ubxn1-201ENSMUST00000096255 1041 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
SynpoQ8CC35 BC107364-202ENSMUST00000098841 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
SynpoQ8CC35 Sptssa-201ENSMUST00000056228 1346 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
SynpoQ8CC35 Metrn-202ENSMUST00000165838 1363 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
SynpoQ8CC35 D16Ertd472e-202ENSMUST00000114219 1576 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
SynpoQ8CC35 Zmynd10-201ENSMUST00000010188 1765 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
SynpoQ8CC35 Rbm43-201ENSMUST00000102767 2057 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
SynpoQ8CC35 Schip1-206ENSMUST00000182719 2156 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
SynpoQ8CC35 Cxxc1-201ENSMUST00000025444 2618 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
SynpoQ8CC35 Trim44-201ENSMUST00000102573 5612 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
SynpoQ8CC35 Azi2-207ENSMUST00000134433 2499 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
SynpoQ8CC35 Mtcl1-201ENSMUST00000086693 7221 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
SynpoQ8CC35 Zfp821-206ENSMUST00000212964 2033 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
SynpoQ8CC35 Oxct2a-201ENSMUST00000102640 1760 ntAPPRIS P1 BASIC17.59■□□□□ 0.41
SynpoQ8CC35 Matk-204ENSMUST00000120265 1618 ntAPPRIS ALT2 TSL 5 BASIC17.59■□□□□ 0.41
SynpoQ8CC35 Tuba3a-201ENSMUST00000088246 1509 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
SynpoQ8CC35 Eif1-201ENSMUST00000049385 1322 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
SynpoQ8CC35 Fam98c-203ENSMUST00000134176 1189 ntTSL 2 BASIC17.59■□□□□ 0.41
SynpoQ8CC35 Gm10153-202ENSMUST00000210290 963 ntAPPRIS P1 BASIC17.59■□□□□ 0.41
SynpoQ8CC35 Uqcc2-201ENSMUST00000025045 500 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
SynpoQ8CC35 Mfap2-201ENSMUST00000071977 1073 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
SynpoQ8CC35 Pusl1-201ENSMUST00000097737 1243 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
SynpoQ8CC35 Gas1-201ENSMUST00000065086 2961 ntAPPRIS ALT2 BASIC17.59■□□□□ 0.41
SynpoQ8CC35 Golga7-201ENSMUST00000051094 1792 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
SynpoQ8CC35 Ppm1n-201ENSMUST00000032560 1648 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
SynpoQ8CC35 Unc50-201ENSMUST00000027285 1414 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
SynpoQ8CC35 Caml-201ENSMUST00000021963 1382 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
SynpoQ8CC35 Ssfa2-203ENSMUST00000111788 4976 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.4
SynpoQ8CC35 Josd2-204ENSMUST00000118628 864 ntAPPRIS P1 TSL 2 BASIC17.58■□□□□ 0.4
SynpoQ8CC35 Ndufa12-204ENSMUST00000179990 566 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
SynpoQ8CC35 Gm27032-201ENSMUST00000183124 1116 ntBASIC17.58■□□□□ 0.4
SynpoQ8CC35 Josd2-201ENSMUST00000035844 930 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
SynpoQ8CC35 1700018M17Rik-201ENSMUST00000052502 456 ntBASIC17.58■□□□□ 0.4
SynpoQ8CC35 Ttc32-201ENSMUST00000085741 1000 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
SynpoQ8CC35 Fam53a-202ENSMUST00000065119 2009 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.4
SynpoQ8CC35 Fbxo17-201ENSMUST00000032818 1958 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
SynpoQ8CC35 Gfra1-208ENSMUST00000152507 1937 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.4
SynpoQ8CC35 Paics-201ENSMUST00000031160 2482 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
SynpoQ8CC35 Paqr6-204ENSMUST00000147991 1670 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
SynpoQ8CC35 Gpatch2-201ENSMUST00000044812 1639 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
SynpoQ8CC35 Efnb2-201ENSMUST00000001319 4793 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
SynpoQ8CC35 Gna11-201ENSMUST00000043604 3414 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
SynpoQ8CC35 Pgam5-202ENSMUST00000112505 2098 ntAPPRIS ALT1 TSL 1 (best) BASIC17.57■□□□□ 0.4
SynpoQ8CC35 Gm26884-201ENSMUST00000181207 3074 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
SynpoQ8CC35 Itgb5-201ENSMUST00000069345 3056 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
SynpoQ8CC35 1810010K12Rik-201ENSMUST00000070378 1324 ntBASIC17.57■□□□□ 0.4
SynpoQ8CC35 Gm10653-202ENSMUST00000139570 835 ntBASIC17.57■□□□□ 0.4
SynpoQ8CC35 1110004E09Rik-201ENSMUST00000023694 1143 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
SynpoQ8CC35 Selenom-201ENSMUST00000094469 707 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
SynpoQ8CC35 Azi2-205ENSMUST00000133580 2156 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
SynpoQ8CC35 Alg1-201ENSMUST00000049207 1669 ntAPPRIS ALT2 TSL 2 BASIC17.57■□□□□ 0.4
SynpoQ8CC35 Alyref-201ENSMUST00000026125 3527 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
SynpoQ8CC35 Phf23-204ENSMUST00000133485 1607 ntTSL 5 BASIC17.57■□□□□ 0.4
SynpoQ8CC35 Gm28523-201ENSMUST00000190040 1588 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
SynpoQ8CC35 Ptges3-201ENSMUST00000052798 2000 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
SynpoQ8CC35 Pqlc1-207ENSMUST00000140594 2356 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
SynpoQ8CC35 Rarb-207ENSMUST00000225921 2756 ntBASIC17.57■□□□□ 0.4
SynpoQ8CC35 Cnot11-201ENSMUST00000003219 3162 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
SynpoQ8CC35 Scrib-201ENSMUST00000002603 5599 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
SynpoQ8CC35 Rnf44-204ENSMUST00000125871 4292 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
SynpoQ8CC35 Trabd-206ENSMUST00000169891 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Retrieved 100 of 76,532 protein–RNA pairs in 47.7 ms