Protein–RNA interactions for Protein: Q8CA03

Slc46a2, Thymic stromal cotransporter protein, mousemouse

Predictions only

Length 479 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc46a2Q8CA03 Il4i1-202ENSMUST00000118125 2275 ntAPPRIS ALT2 TSL 2 BASIC17.53■□□□□ 0.4
Slc46a2Q8CA03 Cdh4-203ENSMUST00000108911 1208 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Slc46a2Q8CA03 Ccni-201ENSMUST00000058550 2804 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Slc46a2Q8CA03 Odf2-211ENSMUST00000113767 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Slc46a2Q8CA03 Ttc34-203ENSMUST00000207854 4733 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
Slc46a2Q8CA03 Arpc1a-201ENSMUST00000031625 1632 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Slc46a2Q8CA03 Ppm1n-201ENSMUST00000032560 1648 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Slc46a2Q8CA03 Il15ra-201ENSMUST00000078834 1600 ntAPPRIS P3 TSL 5 BASIC17.53■□□□□ 0.4
Slc46a2Q8CA03 Podxl2-202ENSMUST00000061262 2195 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
Slc46a2Q8CA03 Mycn-202ENSMUST00000130990 2522 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Slc46a2Q8CA03 Adap2-201ENSMUST00000021050 1785 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Slc46a2Q8CA03 Ubac2-201ENSMUST00000039803 2139 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Slc46a2Q8CA03 Wnt6-201ENSMUST00000006716 2071 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Slc46a2Q8CA03 Esco1-202ENSMUST00000097670 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
Slc46a2Q8CA03 9330154J02Rik-202ENSMUST00000185960 2557 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Slc46a2Q8CA03 Nfil3-201ENSMUST00000071065 2026 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Slc46a2Q8CA03 Wt1-205ENSMUST00000143043 3090 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
Slc46a2Q8CA03 Scrib-203ENSMUST00000109946 5545 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
Slc46a2Q8CA03 Tbc1d13-201ENSMUST00000044556 3595 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Slc46a2Q8CA03 Ostm1-201ENSMUST00000040718 3006 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Slc46a2Q8CA03 Tor2a-208ENSMUST00000177382 396 ntTSL 5 BASIC17.52■□□□□ 0.4
Slc46a2Q8CA03 Egln2-202ENSMUST00000108382 1756 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.4
Slc46a2Q8CA03 Vgf-201ENSMUST00000041543 2553 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Slc46a2Q8CA03 Trak1-209ENSMUST00000210798 5363 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.39
Slc46a2Q8CA03 Dcaf8-206ENSMUST00000192704 2859 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Slc46a2Q8CA03 Lancl2-201ENSMUST00000050077 2509 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Slc46a2Q8CA03 Haus8-201ENSMUST00000035960 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.39
Slc46a2Q8CA03 Slc39a10-201ENSMUST00000027131 5498 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Slc46a2Q8CA03 Atp9a-203ENSMUST00000109176 3691 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Slc46a2Q8CA03 Gm10167-201ENSMUST00000150411 1479 ntBASIC17.51■□□□□ 0.39
Slc46a2Q8CA03 Tmco4-202ENSMUST00000050949 3318 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Slc46a2Q8CA03 Best2-203ENSMUST00000209421 2212 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Slc46a2Q8CA03 Ispd-201ENSMUST00000062041 2690 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Slc46a2Q8CA03 Tarbp2-202ENSMUST00000100168 1278 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Slc46a2Q8CA03 Jagn1-201ENSMUST00000101070 1201 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Slc46a2Q8CA03 Gm11713-201ENSMUST00000139941 523 ntTSL 3 BASIC17.51■□□□□ 0.39
Slc46a2Q8CA03 Gm8309-201ENSMUST00000206627 1448 ntBASIC17.51■□□□□ 0.39
Slc46a2Q8CA03 Il17re-201ENSMUST00000053569 1898 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Slc46a2Q8CA03 Fam58b-201ENSMUST00000059468 1224 ntAPPRIS P1 BASIC17.51■□□□□ 0.39
Slc46a2Q8CA03 Otud7a-201ENSMUST00000058476 3483 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Slc46a2Q8CA03 Vegfc-201ENSMUST00000033919 2449 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Slc46a2Q8CA03 Mrpl39-201ENSMUST00000116584 2294 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Slc46a2Q8CA03 Esrrb-201ENSMUST00000021680 2136 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
Slc46a2Q8CA03 Cdca3-201ENSMUST00000024270 1976 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Slc46a2Q8CA03 Lhx2-203ENSMUST00000143783 1696 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Slc46a2Q8CA03 Hps4-201ENSMUST00000035279 2836 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Slc46a2Q8CA03 Lpgat1-202ENSMUST00000110856 2792 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Slc46a2Q8CA03 Stx4a-201ENSMUST00000033075 1456 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Slc46a2Q8CA03 Mff-202ENSMUST00000078332 1894 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Slc46a2Q8CA03 Diras1-201ENSMUST00000055125 2953 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Slc46a2Q8CA03 Arpc4-201ENSMUST00000156898 2270 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Slc46a2Q8CA03 Kcnj4-201ENSMUST00000057801 2148 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Slc46a2Q8CA03 Eif4enif1-203ENSMUST00000110049 3614 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Slc46a2Q8CA03 Sox8-202ENSMUST00000173447 928 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Slc46a2Q8CA03 Gm20548-204ENSMUST00000174528 791 ntTSL 3 BASIC17.5■□□□□ 0.39
Slc46a2Q8CA03 Olfr718-ps1-204ENSMUST00000218872 963 ntAPPRIS ALT2 BASIC17.5■□□□□ 0.39
Slc46a2Q8CA03 Vsig10-201ENSMUST00000086464 2052 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
Slc46a2Q8CA03 Stac2-201ENSMUST00000017544 3050 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Slc46a2Q8CA03 Gm26858-201ENSMUST00000180608 2040 ntTSL 5 BASIC17.5■□□□□ 0.39
Slc46a2Q8CA03 Ogfod2-202ENSMUST00000119269 1474 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Slc46a2Q8CA03 Camk1-201ENSMUST00000032409 1496 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Slc46a2Q8CA03 Gm26795-201ENSMUST00000180993 1952 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Slc46a2Q8CA03 Sept4-206ENSMUST00000122067 1303 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Slc46a2Q8CA03 Txndc15-201ENSMUST00000021959 1527 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Slc46a2Q8CA03 Gm12356-201ENSMUST00000122854 353 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Slc46a2Q8CA03 Gm15867-201ENSMUST00000159407 388 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Slc46a2Q8CA03 Gas5-217ENSMUST00000161005 430 ntTSL 5 BASIC17.49■□□□□ 0.39
Slc46a2Q8CA03 4933406I18Rik-202ENSMUST00000163996 904 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Slc46a2Q8CA03 Cox5b-204ENSMUST00000193210 865 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Slc46a2Q8CA03 Gm11175-202ENSMUST00000211380 408 ntTSL 3 BASIC17.49■□□□□ 0.39
Slc46a2Q8CA03 Nr2c2ap-202ENSMUST00000211898 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Slc46a2Q8CA03 Igfbp6-201ENSMUST00000023807 1112 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Slc46a2Q8CA03 Xxylt1-201ENSMUST00000055389 2987 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Slc46a2Q8CA03 2810025M15Rik-201ENSMUST00000061537 1194 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Slc46a2Q8CA03 Yipf2-202ENSMUST00000078572 1894 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Slc46a2Q8CA03 Lats2-201ENSMUST00000022531 5191 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Slc46a2Q8CA03 Gpr137-201ENSMUST00000025909 1717 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Slc46a2Q8CA03 Farp1-201ENSMUST00000026635 4885 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
Slc46a2Q8CA03 4930426D05Rik-202ENSMUST00000139804 1650 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Slc46a2Q8CA03 3110043O21Rik-203ENSMUST00000108127 3193 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Slc46a2Q8CA03 Serbp1-211ENSMUST00000204293 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Slc46a2Q8CA03 Appl2-201ENSMUST00000020500 3020 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Slc46a2Q8CA03 Scly-201ENSMUST00000027532 2202 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Slc46a2Q8CA03 Tnrc18-201ENSMUST00000151477 6487 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Slc46a2Q8CA03 Nt5c3b-204ENSMUST00000107398 1635 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Slc46a2Q8CA03 Mff-208ENSMUST00000160786 1645 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Slc46a2Q8CA03 Ocel1-202ENSMUST00000110051 2179 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Slc46a2Q8CA03 Cdk19os-202ENSMUST00000143103 1124 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Slc46a2Q8CA03 Rps2-ps10-202ENSMUST00000170335 965 ntBASIC17.48■□□□□ 0.39
Slc46a2Q8CA03 Fbxl15-202ENSMUST00000177667 1243 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Slc46a2Q8CA03 Hyi-205ENSMUST00000194248 936 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Slc46a2Q8CA03 Fam98a-201ENSMUST00000112507 2817 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Slc46a2Q8CA03 Cdv3-201ENSMUST00000035484 3387 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
Slc46a2Q8CA03 Cd47-201ENSMUST00000084838 5277 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Slc46a2Q8CA03 Wnk2-201ENSMUST00000035538 6630 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Slc46a2Q8CA03 B3gnt9-202ENSMUST00000136822 2516 ntAPPRIS P1 BASIC17.48■□□□□ 0.39
Slc46a2Q8CA03 M5C1000I18Rik-202ENSMUST00000186205 1414 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Slc46a2Q8CA03 Msx2-201ENSMUST00000021922 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Slc46a2Q8CA03 Ier2-201ENSMUST00000060427 1522 ntAPPRIS P1 BASIC17.47■□□□□ 0.39
Slc46a2Q8CA03 Zfp800-203ENSMUST00000115321 2699 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Retrieved 100 of 76,532 protein–RNA pairs in 29.7 ms