Protein–RNA interactions for Protein: Q8C8B0

Alx1, ALX homeobox protein 1, mousemouse

Predictions only

Length 326 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Alx1Q8C8B0 Hmga1-202ENSMUST00000117254 1328 ntAPPRIS P3 TSL 2 BASIC21.42■■□□□ 1.02
Alx1Q8C8B0 Xkr6-201ENSMUST00000119973 2963 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Alx1Q8C8B0 Phox2b-201ENSMUST00000012664 3013 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Alx1Q8C8B0 Schip1-203ENSMUST00000170788 1730 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Alx1Q8C8B0 Gm21596-201ENSMUST00000178049 1316 ntBASIC21.42■■□□□ 1.02
Alx1Q8C8B0 Sh2b2-204ENSMUST00000196447 1783 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
Alx1Q8C8B0 Trmt13-210ENSMUST00000198454 880 ntBASIC21.42■■□□□ 1.02
Alx1Q8C8B0 Ngb-201ENSMUST00000021420 1616 ntAPPRIS P3 TSL 1 (best) BASIC21.42■■□□□ 1.02
Alx1Q8C8B0 AC135637.1-201ENSMUST00000227750 365 ntBASIC21.42■■□□□ 1.02
Alx1Q8C8B0 Tgds-204ENSMUST00000228543 1594 ntBASIC21.42■■□□□ 1.02
Alx1Q8C8B0 Klhdc1-201ENSMUST00000063445 2620 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Alx1Q8C8B0 Tuba3b-201ENSMUST00000087445 1775 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Alx1Q8C8B0 Osbp-201ENSMUST00000025590 4578 ntAPPRIS P1 TSL 5 BASIC21.42■■□□□ 1.02
Alx1Q8C8B0 Espn-208ENSMUST00000105654 1566 ntTSL 5 BASIC21.41■■□□□ 1.02
Alx1Q8C8B0 Gm16386-201ENSMUST00000181397 1423 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
Alx1Q8C8B0 Hist1h4c-201ENSMUST00000102967 820 ntAPPRIS P1 BASIC21.41■■□□□ 1.02
Alx1Q8C8B0 Gm17041-201ENSMUST00000163196 479 ntTSL 3 BASIC21.41■■□□□ 1.02
Alx1Q8C8B0 Gm16475-201ENSMUST00000207306 512 ntTSL 2 BASIC21.41■■□□□ 1.02
Alx1Q8C8B0 Grp-201ENSMUST00000025395 862 ntAPPRIS P2 TSL 1 (best) BASIC21.41■■□□□ 1.02
Alx1Q8C8B0 Clybl-201ENSMUST00000026625 1231 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Alx1Q8C8B0 Anapc5-208ENSMUST00000197719 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC21.41■■□□□ 1.02
Alx1Q8C8B0 Podxl2-202ENSMUST00000061262 2195 ntAPPRIS P3 TSL 1 (best) BASIC21.41■■□□□ 1.02
Alx1Q8C8B0 Ptges3-202ENSMUST00000084771 1559 ntTSL 5 BASIC21.4■■□□□ 1.02
Alx1Q8C8B0 Pcmtd1-201ENSMUST00000061280 5232 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Alx1Q8C8B0 Tekt1-201ENSMUST00000021155 1447 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Alx1Q8C8B0 Gpr137-202ENSMUST00000099774 1434 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
Alx1Q8C8B0 Siglecf-206ENSMUST00000206299 2149 ntAPPRIS ALT2 TSL 1 (best) BASIC21.4■■□□□ 1.02
Alx1Q8C8B0 Il4i1-201ENSMUST00000033015 2048 ntAPPRIS P3 TSL 1 (best) BASIC21.4■■□□□ 1.02
Alx1Q8C8B0 Arid3c-202ENSMUST00000150809 1327 ntAPPRIS ALT2 TSL 1 (best) BASIC21.4■■□□□ 1.02
Alx1Q8C8B0 Dbndd1-202ENSMUST00000176286 1344 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
Alx1Q8C8B0 Gm26657-201ENSMUST00000181745 1308 ntAPPRIS P1 BASIC21.4■■□□□ 1.02
Alx1Q8C8B0 Arl2bp-202ENSMUST00000109527 1133 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
Alx1Q8C8B0 Hebp1-201ENSMUST00000045855 1058 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Alx1Q8C8B0 Tpsb2-201ENSMUST00000069616 1081 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Alx1Q8C8B0 Zcchc14-201ENSMUST00000046386 7444 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Alx1Q8C8B0 Esx1-202ENSMUST00000113066 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC21.4■■□□□ 1.02
Alx1Q8C8B0 Ahcyl1-201ENSMUST00000029490 3863 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Alx1Q8C8B0 Maff-201ENSMUST00000096350 1933 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
Alx1Q8C8B0 Tpra1-223ENSMUST00000204765 1738 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Alx1Q8C8B0 Gm44878-201ENSMUST00000205812 1295 ntBASIC21.39■■□□□ 1.01
Alx1Q8C8B0 D130020L05Rik-202ENSMUST00000220889 769 ntTSL 3 BASIC21.39■■□□□ 1.01
Alx1Q8C8B0 AC163280.1-201ENSMUST00000228194 1100 ntBASIC21.39■■□□□ 1.01
Alx1Q8C8B0 Anks1b-208ENSMUST00000182053 1649 ntTSL 5 BASIC21.39■■□□□ 1.01
Alx1Q8C8B0 Rtcb-201ENSMUST00000001834 2009 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Alx1Q8C8B0 Zc3h15-201ENSMUST00000081591 2111 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Alx1Q8C8B0 Cdca4-201ENSMUST00000062092 2425 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Alx1Q8C8B0 Oxct2b-201ENSMUST00000102648 1735 ntAPPRIS P1 BASIC21.38■■□□□ 1.01
Alx1Q8C8B0 Gm5112-201ENSMUST00000204407 2368 ntBASIC21.38■■□□□ 1.01
Alx1Q8C8B0 Espn-206ENSMUST00000103196 1323 ntTSL 5 BASIC21.38■■□□□ 1.01
Alx1Q8C8B0 Tnfaip8-208ENSMUST00000148989 1002 ntAPPRIS P1 TSL 2 BASIC21.38■■□□□ 1.01
Alx1Q8C8B0 Pantr1-210ENSMUST00000185599 343 ntTSL 3 BASIC21.38■■□□□ 1.01
Alx1Q8C8B0 Trim63-202ENSMUST00000105875 1886 ntAPPRIS P2 TSL 5 BASIC21.38■■□□□ 1.01
Alx1Q8C8B0 Patz1-203ENSMUST00000094471 2930 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
Alx1Q8C8B0 Atp5d-203ENSMUST00000105367 1410 ntAPPRIS P1 TSL 5 BASIC21.38■■□□□ 1.01
Alx1Q8C8B0 Btbd6-202ENSMUST00000165079 1975 ntAPPRIS ALT2 TSL 3 BASIC21.37■■□□□ 1.01
Alx1Q8C8B0 Prmt6-201ENSMUST00000106567 2450 ntAPPRIS P1 BASIC21.37■■□□□ 1.01
Alx1Q8C8B0 Gm19531-201ENSMUST00000216737 1377 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
Alx1Q8C8B0 Lbp-202ENSMUST00000109491 1322 ntTSL 2 BASIC21.37■■□□□ 1.01
Alx1Q8C8B0 Cacng6-201ENSMUST00000108647 868 ntTSL 5 BASIC21.37■■□□□ 1.01
Alx1Q8C8B0 Cklf-203ENSMUST00000211809 525 ntAPPRIS ALT2 TSL 1 (best) BASIC21.37■■□□□ 1.01
Alx1Q8C8B0 Exosc3-201ENSMUST00000030003 1077 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Alx1Q8C8B0 Cox8a-201ENSMUST00000039758 545 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Alx1Q8C8B0 Mfsd14a-201ENSMUST00000029570 2782 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Alx1Q8C8B0 Dtwd2-201ENSMUST00000025383 2476 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Alx1Q8C8B0 Gm35558-201ENSMUST00000222675 2219 ntBASIC21.37■■□□□ 1.01
Alx1Q8C8B0 AC163637.2-201ENSMUST00000213826 1945 ntAPPRIS P1 TSL 2 BASIC21.37■■□□□ 1.01
Alx1Q8C8B0 Espn-211ENSMUST00000105657 1375 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
Alx1Q8C8B0 Mboat4-201ENSMUST00000095345 1836 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Alx1Q8C8B0 Eif4g3-201ENSMUST00000058133 2663 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
Alx1Q8C8B0 Dmtn-210ENSMUST00000228824 2377 ntBASIC21.36■■□□□ 1.01
Alx1Q8C8B0 Zfp560-202ENSMUST00000143992 608 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
Alx1Q8C8B0 Spata3-208ENSMUST00000149469 1110 ntTSL 5 BASIC21.36■■□□□ 1.01
Alx1Q8C8B0 Gm19391-201ENSMUST00000196653 999 ntTSL 3 BASIC21.36■■□□□ 1.01
Alx1Q8C8B0 Rpl18-202ENSMUST00000209287 1027 ntTSL 3 BASIC21.36■■□□□ 1.01
Alx1Q8C8B0 Mtag2-201ENSMUST00000058665 714 ntBASIC21.36■■□□□ 1.01
Alx1Q8C8B0 Map6-202ENSMUST00000107100 2335 ntAPPRIS ALT2 TSL 1 (best) BASIC21.36■■□□□ 1.01
Alx1Q8C8B0 Mob2-201ENSMUST00000084418 1490 ntAPPRIS P2 TSL 1 (best) BASIC21.36■■□□□ 1.01
Alx1Q8C8B0 Eif3b-201ENSMUST00000100507 2945 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Alx1Q8C8B0 Gpr162-204ENSMUST00000204667 2855 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Alx1Q8C8B0 Nectin3-201ENSMUST00000023334 3062 ntAPPRIS P4 TSL 1 (best) BASIC21.36■■□□□ 1.01
Alx1Q8C8B0 Anapc5-203ENSMUST00000196640 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC21.36■■□□□ 1.01
Alx1Q8C8B0 Lrg1-201ENSMUST00000041357 1351 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Alx1Q8C8B0 Aqp5-201ENSMUST00000088200 1376 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Alx1Q8C8B0 Sdr39u1-201ENSMUST00000111325 1255 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Alx1Q8C8B0 Tmed5-204ENSMUST00000118036 1045 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
Alx1Q8C8B0 Ube2s-201ENSMUST00000079496 1238 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Alx1Q8C8B0 Mtmr14-201ENSMUST00000113146 2676 ntAPPRIS P2 TSL 1 (best) BASIC21.34■■□□□ 1.01
Alx1Q8C8B0 Itm2c-203ENSMUST00000185569 1465 ntTSL 5 BASIC21.34■■□□□ 1.01
Alx1Q8C8B0 Agxt-201ENSMUST00000027491 1553 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Alx1Q8C8B0 Smarcad1-201ENSMUST00000031984 5168 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Alx1Q8C8B0 Atxn7l2-202ENSMUST00000117409 2321 ntAPPRIS ALT2 TSL 5 BASIC21.33■■□□□ 1.01
Alx1Q8C8B0 Coq5-201ENSMUST00000040421 2037 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Alx1Q8C8B0 Lrrc43-201ENSMUST00000094327 2046 ntAPPRIS P3 TSL 1 (best) BASIC21.33■■□□□ 1.01
Alx1Q8C8B0 Pou3f3-201ENSMUST00000054883 7409 ntAPPRIS P1 BASIC21.33■■□□□ 1.01
Alx1Q8C8B0 Gm5643-201ENSMUST00000117081 966 ntBASIC21.33■■□□□ 1.01
Alx1Q8C8B0 Gm10638-201ENSMUST00000098532 905 ntAPPRIS P1 BASIC21.33■■□□□ 1.01
Alx1Q8C8B0 Mplkip-201ENSMUST00000049744 2672 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Alx1Q8C8B0 Pqlc1-201ENSMUST00000070135 1911 ntAPPRIS ALT2 TSL 1 (best) BASIC21.33■■□□□ 1
Alx1Q8C8B0 Gabra4-205ENSMUST00000199357 2407 ntAPPRIS ALT2 TSL 1 (best) BASIC21.33■■□□□ 1
Alx1Q8C8B0 Ccdc3-201ENSMUST00000027988 2670 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Retrieved 100 of 76,532 protein–RNA pairs in 28.7 ms