Protein–RNA interactions for Protein: Q8C2E4

Ptcd1, Pentatricopeptide repeat-containing protein 1, mitochondrial, mousemouse

Known RBP Predictions only

Length 695 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ptcd1Q8C2E4 5730507C01Rik-202ENSMUST00000177778 2542 ntAPPRIS ALT2 TSL 1 (best) BASIC22.5■■□□□ 1.19
Ptcd1Q8C2E4 Cfl1-201ENSMUST00000116560 1148 ntTSL 5 BASIC22.5■■□□□ 1.19
Ptcd1Q8C2E4 Zmynd19-202ENSMUST00000148042 1103 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
Ptcd1Q8C2E4 Gm6659-201ENSMUST00000174752 547 ntBASIC22.5■■□□□ 1.19
Ptcd1Q8C2E4 Zfp428-203ENSMUST00000177205 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC22.5■■□□□ 1.19
Ptcd1Q8C2E4 Gm43183-201ENSMUST00000200632 547 ntBASIC22.5■■□□□ 1.19
Ptcd1Q8C2E4 Lsm1-203ENSMUST00000211168 343 ntTSL 3 BASIC22.5■■□□□ 1.19
Ptcd1Q8C2E4 Irx3-201ENSMUST00000093312 2610 ntAPPRIS P4 TSL 1 (best) BASIC22.5■■□□□ 1.19
Ptcd1Q8C2E4 Cadps-202ENSMUST00000112657 5455 ntAPPRIS ALT2 TSL 5 BASIC22.5■■□□□ 1.19
Ptcd1Q8C2E4 Zfp668-202ENSMUST00000106261 2410 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
Ptcd1Q8C2E4 Gabarap-201ENSMUST00000018711 1351 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
Ptcd1Q8C2E4 Rasgef1a-201ENSMUST00000164960 3284 ntAPPRIS ALT2 TSL 5 BASIC22.49■■□□□ 1.19
Ptcd1Q8C2E4 Auh-203ENSMUST00000119311 2627 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
Ptcd1Q8C2E4 Myd88-201ENSMUST00000035092 1960 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
Ptcd1Q8C2E4 Slc35a3-201ENSMUST00000029569 5725 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
Ptcd1Q8C2E4 Nrxn2-208ENSMUST00000137166 6314 ntAPPRIS ALT2 TSL 5 BASIC22.49■■□□□ 1.19
Ptcd1Q8C2E4 Rad1-201ENSMUST00000022856 1514 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
Ptcd1Q8C2E4 Nkx2-2-203ENSMUST00000109970 1053 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
Ptcd1Q8C2E4 Cib1-207ENSMUST00000206084 772 ntTSL 3 BASIC22.49■■□□□ 1.19
Ptcd1Q8C2E4 Cib1-202ENSMUST00000071457 702 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
Ptcd1Q8C2E4 Atf1-201ENSMUST00000023769 2365 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
Ptcd1Q8C2E4 Cpne7-201ENSMUST00000037900 2398 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
Ptcd1Q8C2E4 Anapc5-205ENSMUST00000197074 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC22.49■■□□□ 1.19
Ptcd1Q8C2E4 Anapc5-212ENSMUST00000199406 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC22.49■■□□□ 1.19
Ptcd1Q8C2E4 Smox-209ENSMUST00000110189 1919 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
Ptcd1Q8C2E4 Slc16a10-201ENSMUST00000092566 5397 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
Ptcd1Q8C2E4 Arpc5-202ENSMUST00000097536 1737 ntTSL 1 (best) BASIC22.48■■□□□ 1.19
Ptcd1Q8C2E4 Vrk1-202ENSMUST00000072040 1509 ntAPPRIS ALT2 TSL 1 (best) BASIC22.48■■□□□ 1.19
Ptcd1Q8C2E4 Spry1-202ENSMUST00000108107 2773 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
Ptcd1Q8C2E4 Fam229a-201ENSMUST00000106043 558 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
Ptcd1Q8C2E4 Gm13559-201ENSMUST00000120476 863 ntBASIC22.48■■□□□ 1.19
Ptcd1Q8C2E4 Tmem80-202ENSMUST00000126510 959 ntAPPRIS P1 TSL 5 BASIC22.48■■□□□ 1.19
Ptcd1Q8C2E4 Moap1-202ENSMUST00000178384 1284 ntAPPRIS P1 TSL 2 BASIC22.48■■□□□ 1.19
Ptcd1Q8C2E4 4930579K19Rik-202ENSMUST00000190541 632 ntTSL 2 BASIC22.48■■□□□ 1.19
Ptcd1Q8C2E4 1700025A08Rik-201ENSMUST00000200753 609 ntBASIC22.48■■□□□ 1.19
Ptcd1Q8C2E4 Pfdn6-201ENSMUST00000025163 807 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
Ptcd1Q8C2E4 Lbx2-201ENSMUST00000041265 817 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
Ptcd1Q8C2E4 Slc39a5-201ENSMUST00000042666 1947 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
Ptcd1Q8C2E4 Marc2-201ENSMUST00000068725 1917 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
Ptcd1Q8C2E4 Fam53a-202ENSMUST00000065119 2009 ntAPPRIS P2 TSL 1 (best) BASIC22.48■■□□□ 1.19
Ptcd1Q8C2E4 Blcap-202ENSMUST00000109528 2056 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
Ptcd1Q8C2E4 5730507C01Rik-201ENSMUST00000063216 2431 ntAPPRIS P3 TSL 1 (best) BASIC22.48■■□□□ 1.19
Ptcd1Q8C2E4 Parp12-201ENSMUST00000038398 3231 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
Ptcd1Q8C2E4 Sos2-206ENSMUST00000183277 4512 ntAPPRIS ALT2 TSL 5 BASIC22.47■■□□□ 1.19
Ptcd1Q8C2E4 Tmem11-203ENSMUST00000168218 1511 ntTSL 2 BASIC22.47■■□□□ 1.19
Ptcd1Q8C2E4 Gramd1a-201ENSMUST00000001280 2713 ntAPPRIS P2 TSL 1 (best) BASIC22.47■■□□□ 1.19
Ptcd1Q8C2E4 Magi3-201ENSMUST00000064371 6640 ntAPPRIS P3 TSL 1 (best) BASIC22.47■■□□□ 1.19
Ptcd1Q8C2E4 Lgr4-201ENSMUST00000046548 5060 ntAPPRIS P1 TSL 2 BASIC22.47■■□□□ 1.19
Ptcd1Q8C2E4 Mtg1-201ENSMUST00000036977 1595 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
Ptcd1Q8C2E4 Dyrk1b-203ENSMUST00000172761 2018 ntAPPRIS ALT1 TSL 1 (best) BASIC22.47■■□□□ 1.19
Ptcd1Q8C2E4 Chd3os-201ENSMUST00000129321 2081 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
Ptcd1Q8C2E4 Arl4aos-201ENSMUST00000135883 748 ntTSL 1 (best) BASIC22.47■■□□□ 1.19
Ptcd1Q8C2E4 Dusp13-213ENSMUST00000184703 902 ntAPPRIS ALT1 TSL 5 BASIC22.47■■□□□ 1.19
Ptcd1Q8C2E4 Fkbp3-201ENSMUST00000021332 1022 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
Ptcd1Q8C2E4 Gm32151-201ENSMUST00000223521 915 ntTSL 5 BASIC22.47■■□□□ 1.19
Ptcd1Q8C2E4 Znrf4-201ENSMUST00000052211 1236 ntAPPRIS P1 BASIC22.47■■□□□ 1.19
Ptcd1Q8C2E4 Ppp3ca-201ENSMUST00000056758 2194 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
Ptcd1Q8C2E4 Gm16386-201ENSMUST00000181397 1423 ntTSL 1 (best) BASIC22.47■■□□□ 1.19
Ptcd1Q8C2E4 Tbc1d25-201ENSMUST00000039892 2648 ntAPPRIS P3 TSL 1 (best) BASIC22.46■■□□□ 1.19
Ptcd1Q8C2E4 Prpf19-201ENSMUST00000025642 2134 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
Ptcd1Q8C2E4 Hnrnpl-211ENSMUST00000174548 2679 ntAPPRIS P1 TSL 5 BASIC22.46■■□□□ 1.19
Ptcd1Q8C2E4 Sco1-202ENSMUST00000108690 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC22.46■■□□□ 1.19
Ptcd1Q8C2E4 Tifa-201ENSMUST00000054483 2245 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
Ptcd1Q8C2E4 Zmynd10-201ENSMUST00000010188 1765 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
Ptcd1Q8C2E4 R3hdm4-201ENSMUST00000045628 1898 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
Ptcd1Q8C2E4 Gm16042-201ENSMUST00000204813 1247 ntBASIC22.46■■□□□ 1.19
Ptcd1Q8C2E4 Fkbp11-201ENSMUST00000003445 731 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
Ptcd1Q8C2E4 Mtag2-201ENSMUST00000058665 714 ntBASIC22.46■■□□□ 1.19
Ptcd1Q8C2E4 Ankdd1a-201ENSMUST00000061766 1443 ntAPPRIS ALT2 TSL 5 BASIC22.46■■□□□ 1.19
Ptcd1Q8C2E4 Xkr4-201ENSMUST00000070533 3634 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
Ptcd1Q8C2E4 Alg5-201ENSMUST00000044567 1471 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
Ptcd1Q8C2E4 Wdr37-203ENSMUST00000164183 1780 ntTSL 1 (best) BASIC22.45■■□□□ 1.19
Ptcd1Q8C2E4 D11Wsu47e-202ENSMUST00000106621 2062 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
Ptcd1Q8C2E4 Bpnt1-202ENSMUST00000110965 1046 ntTSL 1 (best) BASIC22.45■■□□□ 1.18
Ptcd1Q8C2E4 Prickle4-201ENSMUST00000113299 990 ntTSL 5 BASIC22.45■■□□□ 1.18
Ptcd1Q8C2E4 Prickle4-202ENSMUST00000113300 1110 ntAPPRIS P1 TSL 5 BASIC22.45■■□□□ 1.18
Ptcd1Q8C2E4 Rpl18-ps2-201ENSMUST00000118863 567 ntBASIC22.45■■□□□ 1.18
Ptcd1Q8C2E4 Gm11539-201ENSMUST00000119837 557 ntBASIC22.45■■□□□ 1.18
Ptcd1Q8C2E4 D3Ertd751e-205ENSMUST00000120167 773 ntAPPRIS ALT2 TSL 5 BASIC22.45■■□□□ 1.18
Ptcd1Q8C2E4 Gm13436-201ENSMUST00000120418 567 ntBASIC22.45■■□□□ 1.18
Ptcd1Q8C2E4 Gm6728-201ENSMUST00000178117 1065 ntBASIC22.45■■□□□ 1.18
Ptcd1Q8C2E4 Wdr74-202ENSMUST00000210512 1078 ntTSL 1 (best) BASIC22.45■■□□□ 1.18
Ptcd1Q8C2E4 AC156016.1-201ENSMUST00000227190 1035 ntBASIC22.45■■□□□ 1.18
Ptcd1Q8C2E4 Kansl1-204ENSMUST00000106972 5427 ntAPPRIS ALT2 TSL 5 BASIC22.45■■□□□ 1.18
Ptcd1Q8C2E4 Nanp-201ENSMUST00000066640 1394 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
Ptcd1Q8C2E4 Mgarp-202ENSMUST00000108046 1409 ntTSL 1 (best) BASIC22.45■■□□□ 1.18
Ptcd1Q8C2E4 Tpra1-223ENSMUST00000204765 1738 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
Ptcd1Q8C2E4 AC126028.2-201ENSMUST00000228100 1833 ntBASIC22.45■■□□□ 1.18
Ptcd1Q8C2E4 Cdk4-201ENSMUST00000006911 2053 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
Ptcd1Q8C2E4 Dtnb-225ENSMUST00000174663 2381 ntAPPRIS ALT2 TSL 5 BASIC22.45■■□□□ 1.18
Ptcd1Q8C2E4 Sybu-208ENSMUST00000228057 3026 ntAPPRIS ALT2 BASIC22.44■■□□□ 1.18
Ptcd1Q8C2E4 Nxt1-202ENSMUST00000109961 1116 ntAPPRIS P1 TSL 2 BASIC22.44■■□□□ 1.18
Ptcd1Q8C2E4 Tekt5-202ENSMUST00000115831 1277 ntAPPRIS P3 TSL 1 (best) BASIC22.44■■□□□ 1.18
Ptcd1Q8C2E4 Mir142hg-201ENSMUST00000123700 269 ntTSL 1 (best) BASIC22.44■■□□□ 1.18
Ptcd1Q8C2E4 Guca1b-202ENSMUST00000145462 1556 ntTSL 2 BASIC22.44■■□□□ 1.18
Ptcd1Q8C2E4 Gm10616-201ENSMUST00000205285 2127 ntBASIC22.44■■□□□ 1.18
Ptcd1Q8C2E4 Zfp821-206ENSMUST00000212964 2033 ntTSL 1 (best) BASIC22.44■■□□□ 1.18
Ptcd1Q8C2E4 Mrpl28-201ENSMUST00000025014 1048 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
Ptcd1Q8C2E4 Thap3-201ENSMUST00000036680 1124 ntAPPRIS P3 TSL 1 (best) BASIC22.44■■□□□ 1.18
Ptcd1Q8C2E4 Ntmt1-201ENSMUST00000041830 1387 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
Retrieved 100 of 76,532 protein–RNA pairs in 20 ms