Protein–RNA interactions for Protein: Q8C190

Vps9d1, VPS9 domain-containing protein 1, mousemouse

Predictions only

Length 649 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps9d1Q8C190 Eri1-201ENSMUST00000033927 5079 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Vps9d1Q8C190 Sprtn-201ENSMUST00000034467 4464 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Vps9d1Q8C190 4930447C04Rik-201ENSMUST00000044000 2051 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.33
Vps9d1Q8C190 Nfkbid-203ENSMUST00000108176 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.33
Vps9d1Q8C190 Tcf7-202ENSMUST00000109071 1742 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Vps9d1Q8C190 Chmp6-201ENSMUST00000026434 1557 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Vps9d1Q8C190 Arhgap8-207ENSMUST00000172307 1544 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.32
Vps9d1Q8C190 Dusp14-202ENSMUST00000100705 1447 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Vps9d1Q8C190 Ntmt1-201ENSMUST00000041830 1387 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Vps9d1Q8C190 Fbxl21-202ENSMUST00000121095 798 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Vps9d1Q8C190 Gm40848-201ENSMUST00000221998 324 ntBASIC17.08■□□□□ 0.32
Vps9d1Q8C190 Igfbp6-201ENSMUST00000023807 1112 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Vps9d1Q8C190 Nrxn2-203ENSMUST00000113459 3285 ntTSL 2 BASIC17.08■□□□□ 0.32
Vps9d1Q8C190 Bcor-206ENSMUST00000124033 6785 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Vps9d1Q8C190 Keap1-206ENSMUST00000216436 2498 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.32
Vps9d1Q8C190 4930540M05Rik-201ENSMUST00000180527 2068 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Vps9d1Q8C190 Eif4a1-213ENSMUST00000163666 1774 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Vps9d1Q8C190 Aup1-201ENSMUST00000092618 1769 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Vps9d1Q8C190 Dpf1-203ENSMUST00000108230 1553 ntTSL 5 BASIC17.07■□□□□ 0.32
Vps9d1Q8C190 Fev-201ENSMUST00000068631 1490 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Vps9d1Q8C190 Pacs2-207ENSMUST00000223502 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Vps9d1Q8C190 Itgb5-202ENSMUST00000115028 3090 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Vps9d1Q8C190 Ctdsp2-202ENSMUST00000105256 4817 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Vps9d1Q8C190 Lrig1-201ENSMUST00000032105 4831 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Vps9d1Q8C190 Hist1h2bp-201ENSMUST00000102982 469 ntAPPRIS P1 BASIC17.07■□□□□ 0.32
Vps9d1Q8C190 Rnaseh2a-202ENSMUST00000109736 2981 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
Vps9d1Q8C190 Gm44238-201ENSMUST00000203300 353 ntTSL 3 BASIC17.07■□□□□ 0.32
Vps9d1Q8C190 Hes3-202ENSMUST00000218045 962 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
Vps9d1Q8C190 Fam58b-201ENSMUST00000059468 1224 ntAPPRIS P1 BASIC17.07■□□□□ 0.32
Vps9d1Q8C190 Ypel1-202ENSMUST00000090199 631 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Vps9d1Q8C190 Gm5874-201ENSMUST00000096101 508 ntBASIC17.07■□□□□ 0.32
Vps9d1Q8C190 Mag-207ENSMUST00000191081 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Vps9d1Q8C190 Tulp1-201ENSMUST00000041819 2017 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Vps9d1Q8C190 Rbm11-202ENSMUST00000114249 2750 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
Vps9d1Q8C190 Gm43042-201ENSMUST00000198676 1820 ntTSL 5 BASIC17.07■□□□□ 0.32
Vps9d1Q8C190 1600012H06Rik-202ENSMUST00000164837 2523 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Vps9d1Q8C190 Tspoap1-202ENSMUST00000100644 7390 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
Vps9d1Q8C190 Mtcl1-201ENSMUST00000086693 7221 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
Vps9d1Q8C190 Gm45906-201ENSMUST00000208911 1430 ntBASIC17.06■□□□□ 0.32
Vps9d1Q8C190 AC161052.2-201ENSMUST00000220969 1375 ntTSL 5 BASIC17.06■□□□□ 0.32
Vps9d1Q8C190 Spaca1-201ENSMUST00000029927 1197 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
Vps9d1Q8C190 Unc13b-201ENSMUST00000079978 6354 ntAPPRIS P2 TSL 5 BASIC17.06■□□□□ 0.32
Vps9d1Q8C190 Spaca1-202ENSMUST00000084734 1149 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Vps9d1Q8C190 Nbl1-201ENSMUST00000042844 1793 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Vps9d1Q8C190 Nuak1-201ENSMUST00000020220 5558 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Vps9d1Q8C190 Spc24-205ENSMUST00000217382 1696 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Vps9d1Q8C190 Angptl6-201ENSMUST00000043726 1582 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Vps9d1Q8C190 Rnf157-202ENSMUST00000106398 4553 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
Vps9d1Q8C190 Art5-201ENSMUST00000094128 1518 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
Vps9d1Q8C190 Ispd-207ENSMUST00000223205 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Vps9d1Q8C190 Dstn-201ENSMUST00000103172 1911 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Vps9d1Q8C190 Fez2-201ENSMUST00000070039 1939 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
Vps9d1Q8C190 Apba1-201ENSMUST00000025830 6632 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Vps9d1Q8C190 Mink1-205ENSMUST00000102559 4865 ntAPPRIS P4 TSL 1 (best) BASIC17.05■□□□□ 0.32
Vps9d1Q8C190 Depdc7-201ENSMUST00000028595 1801 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Vps9d1Q8C190 Soat2-201ENSMUST00000023806 2213 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Vps9d1Q8C190 Atp2a2-201ENSMUST00000031423 4486 ntAPPRIS P4 TSL 1 (best) BASIC17.05■□□□□ 0.32
Vps9d1Q8C190 Crocc-203ENSMUST00000102491 6582 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Vps9d1Q8C190 Tbc1d2b-202ENSMUST00000128874 3473 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Vps9d1Q8C190 Cnpy3-202ENSMUST00000121671 561 ntTSL 2 BASIC17.05■□□□□ 0.32
Vps9d1Q8C190 Phox2b-202ENSMUST00000174251 1177 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Vps9d1Q8C190 Plac9b-203ENSMUST00000184142 1040 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Vps9d1Q8C190 Camkk2-202ENSMUST00000196742 1084 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Vps9d1Q8C190 Gpr3-201ENSMUST00000052090 1116 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Vps9d1Q8C190 Gfra3-201ENSMUST00000025224 1992 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Vps9d1Q8C190 Nf2-205ENSMUST00000109910 4720 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
Vps9d1Q8C190 Cdo1-201ENSMUST00000035804 1530 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Vps9d1Q8C190 Gclm-201ENSMUST00000029769 5589 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Vps9d1Q8C190 Tsks-202ENSMUST00000120929 1843 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Vps9d1Q8C190 Tymp-201ENSMUST00000023285 2037 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Vps9d1Q8C190 Dusp8-201ENSMUST00000039926 4804 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Vps9d1Q8C190 Man1c1-202ENSMUST00000054096 4715 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
Vps9d1Q8C190 Zfp692-201ENSMUST00000049353 1860 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Vps9d1Q8C190 Abcd4-210ENSMUST00000223107 2410 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Vps9d1Q8C190 Gm15270-201ENSMUST00000125158 870 ntTSL 3 BASIC17.04■□□□□ 0.32
Vps9d1Q8C190 Gm15908-201ENSMUST00000154345 1091 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Vps9d1Q8C190 AC114678.1-201ENSMUST00000219640 622 ntTSL 3 BASIC17.04■□□□□ 0.32
Vps9d1Q8C190 Nol7-201ENSMUST00000071926 1800 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Vps9d1Q8C190 Tnk1-202ENSMUST00000108626 1798 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Vps9d1Q8C190 Runx1-203ENSMUST00000168195 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Vps9d1Q8C190 Psme3-201ENSMUST00000019470 2664 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Vps9d1Q8C190 Gm4675-202ENSMUST00000164755 2322 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Vps9d1Q8C190 Cpd-201ENSMUST00000021201 7946 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Vps9d1Q8C190 Foxo3-204ENSMUST00000175881 2535 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Vps9d1Q8C190 Gcgr-201ENSMUST00000026119 1957 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Vps9d1Q8C190 Prcd-201ENSMUST00000106381 724 ntTSL 3 BASIC17.03■□□□□ 0.32
Vps9d1Q8C190 Wdr4-203ENSMUST00000167419 813 ntTSL 3 BASIC17.03■□□□□ 0.32
Vps9d1Q8C190 Mrgbp-206ENSMUST00000169630 1192 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Vps9d1Q8C190 Lmo1-202ENSMUST00000207178 912 ntAPPRIS ALT1 TSL 2 BASIC17.03■□□□□ 0.32
Vps9d1Q8C190 Cisd1-201ENSMUST00000045887 1084 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Vps9d1Q8C190 Krtap5-3-201ENSMUST00000084414 1074 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
Vps9d1Q8C190 Pard3-209ENSMUST00000160272 5815 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Vps9d1Q8C190 Slc35g1-201ENSMUST00000054098 3471 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Vps9d1Q8C190 Rtkn-203ENSMUST00000121093 2597 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
Vps9d1Q8C190 Kcns2-201ENSMUST00000072868 5456 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Vps9d1Q8C190 Capzb-204ENSMUST00000102508 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Vps9d1Q8C190 Mtmr3-202ENSMUST00000109943 5674 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Vps9d1Q8C190 Trnt1-202ENSMUST00000113247 1934 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Vps9d1Q8C190 Atg16l2-202ENSMUST00000122116 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
Vps9d1Q8C190 Ankrd9-205ENSMUST00000142012 1226 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 20 ms