Protein–RNA interactions for Protein: Q8C0Q4

Nek11, Serine/threonine-protein kinase Nek11, mousemouse

Predictions only

Length 628 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nek11Q8C0Q4 Alad-202ENSMUST00000107444 1247 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Nek11Q8C0Q4 Tomm6-201ENSMUST00000113301 594 ntAPPRIS P1 TSL 2 BASIC21.68■■□□□ 1.06
Nek11Q8C0Q4 Dsg2-203ENSMUST00000121837 953 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
Nek11Q8C0Q4 Taz-208ENSMUST00000132437 768 ntTSL 3 BASIC21.68■■□□□ 1.06
Nek11Q8C0Q4 Gm15648-201ENSMUST00000149681 778 ntTSL 5 BASIC21.68■■□□□ 1.06
Nek11Q8C0Q4 Bnip1-201ENSMUST00000015725 1085 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Nek11Q8C0Q4 4930467K11Rik-201ENSMUST00000180831 723 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
Nek11Q8C0Q4 Nfu1-201ENSMUST00000032060 948 ntAPPRIS P3 TSL 1 (best) BASIC21.68■■□□□ 1.06
Nek11Q8C0Q4 Mgll-205ENSMUST00000150180 1312 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
Nek11Q8C0Q4 Henmt1-202ENSMUST00000098680 1466 ntAPPRIS ALT2 TSL 1 (best) BASIC21.68■■□□□ 1.06
Nek11Q8C0Q4 Crtap-201ENSMUST00000084881 1674 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Nek11Q8C0Q4 Gm38345-201ENSMUST00000192635 1748 ntBASIC21.68■■□□□ 1.06
Nek11Q8C0Q4 Zc3h15-201ENSMUST00000081591 2111 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Nek11Q8C0Q4 Gabra4-205ENSMUST00000199357 2407 ntAPPRIS ALT2 TSL 1 (best) BASIC21.68■■□□□ 1.06
Nek11Q8C0Q4 Tmem164-201ENSMUST00000087333 5149 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Nek11Q8C0Q4 Prmt3-201ENSMUST00000032715 2507 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Nek11Q8C0Q4 Podxl2-202ENSMUST00000061262 2195 ntAPPRIS P3 TSL 1 (best) BASIC21.67■■□□□ 1.06
Nek11Q8C0Q4 Ncmap-205ENSMUST00000105860 2000 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
Nek11Q8C0Q4 St8sia5-202ENSMUST00000079618 1989 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Nek11Q8C0Q4 Trim63-202ENSMUST00000105875 1886 ntAPPRIS P2 TSL 5 BASIC21.67■■□□□ 1.06
Nek11Q8C0Q4 Naa30-205ENSMUST00000153488 4446 ntAPPRIS P2 TSL 1 (best) BASIC21.67■■□□□ 1.06
Nek11Q8C0Q4 AI314180-201ENSMUST00000055822 1478 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
Nek11Q8C0Q4 Pex16-201ENSMUST00000028650 1392 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Nek11Q8C0Q4 Gm44672-201ENSMUST00000206944 1098 ntBASIC21.67■■□□□ 1.06
Nek11Q8C0Q4 Prmt1-205ENSMUST00000207659 945 ntTSL 5 BASIC21.67■■□□□ 1.06
Nek11Q8C0Q4 Gng10-201ENSMUST00000041160 1192 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Nek11Q8C0Q4 Hdgfl3-202ENSMUST00000107305 5887 ntAPPRIS P2 TSL 1 (best) BASIC21.67■■□□□ 1.06
Nek11Q8C0Q4 Slc16a10-202ENSMUST00000213488 2325 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
Nek11Q8C0Q4 Rassf1-201ENSMUST00000010211 1727 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
Nek11Q8C0Q4 Iscu-202ENSMUST00000112311 1395 ntTSL 2 BASIC21.66■■□□□ 1.06
Nek11Q8C0Q4 Rps14-202ENSMUST00000118551 602 ntAPPRIS P1 TSL 2 BASIC21.66■■□□□ 1.06
Nek11Q8C0Q4 Gm16141-201ENSMUST00000152073 790 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
Nek11Q8C0Q4 Ltbp3-201ENSMUST00000081496 5190 ntAPPRIS P1 TSL 5 BASIC21.66■■□□□ 1.06
Nek11Q8C0Q4 Iqsec1-210ENSMUST00000212100 3500 ntTSL 5 BASIC21.66■■□□□ 1.06
Nek11Q8C0Q4 Sh3bp1-202ENSMUST00000061239 1917 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
Nek11Q8C0Q4 Syncrip-201ENSMUST00000069221 9450 ntAPPRIS P3 TSL 1 (best) BASIC21.66■■□□□ 1.06
Nek11Q8C0Q4 Egln1-201ENSMUST00000034469 3594 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Nek11Q8C0Q4 Rrp9-201ENSMUST00000047721 1586 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Nek11Q8C0Q4 Creg1-202ENSMUST00000111432 2163 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Nek11Q8C0Q4 Tfap4-201ENSMUST00000005862 2113 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Nek11Q8C0Q4 Gm2399-201ENSMUST00000104944 225 ntBASIC21.65■■□□□ 1.06
Nek11Q8C0Q4 Pigp-202ENSMUST00000113906 745 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Nek11Q8C0Q4 Josd2-205ENSMUST00000120852 727 ntAPPRIS P1 TSL 3 BASIC21.65■■□□□ 1.06
Nek11Q8C0Q4 Olfr322-201ENSMUST00000072030 984 ntAPPRIS P1 BASIC21.65■■□□□ 1.06
Nek11Q8C0Q4 Smn1-202ENSMUST00000091321 223 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
Nek11Q8C0Q4 Tnk1-202ENSMUST00000108626 1798 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
Nek11Q8C0Q4 Pex14-201ENSMUST00000103217 2006 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Nek11Q8C0Q4 Tgds-204ENSMUST00000228543 1594 ntBASIC21.65■■□□□ 1.06
Nek11Q8C0Q4 Slc29a1-201ENSMUST00000051574 1996 ntAPPRIS ALT2 TSL 5 BASIC21.65■■□□□ 1.06
Nek11Q8C0Q4 Tmie-201ENSMUST00000050958 2802 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Nek11Q8C0Q4 Lrig1-202ENSMUST00000101126 4951 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Nek11Q8C0Q4 AC163637.2-201ENSMUST00000213826 1945 ntAPPRIS P1 TSL 2 BASIC21.65■■□□□ 1.06
Nek11Q8C0Q4 Pacsin3-215ENSMUST00000168916 1859 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
Nek11Q8C0Q4 Pacsin3-201ENSMUST00000028694 1862 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
Nek11Q8C0Q4 Ergic3-201ENSMUST00000006035 1377 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
Nek11Q8C0Q4 Schip1-203ENSMUST00000170788 1730 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
Nek11Q8C0Q4 Snca-201ENSMUST00000114268 1280 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Nek11Q8C0Q4 Vkorc1-202ENSMUST00000119922 387 ntTSL 3 BASIC21.64■■□□□ 1.05
Nek11Q8C0Q4 Bex2-201ENSMUST00000049130 903 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Nek11Q8C0Q4 1700018M17Rik-201ENSMUST00000052502 456 ntBASIC21.64■■□□□ 1.05
Nek11Q8C0Q4 H2-DMa-201ENSMUST00000042121 1555 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Nek11Q8C0Q4 Egln2-202ENSMUST00000108382 1756 ntAPPRIS P1 TSL 5 BASIC21.64■■□□□ 1.05
Nek11Q8C0Q4 Ssc4d-203ENSMUST00000111152 2745 ntAPPRIS P1 TSL 5 BASIC21.64■■□□□ 1.05
Nek11Q8C0Q4 Mgme1-203ENSMUST00000110028 2308 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Nek11Q8C0Q4 Lsp1-204ENSMUST00000105967 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC21.63■■□□□ 1.05
Nek11Q8C0Q4 Dnajc19-204ENSMUST00000120805 551 ntTSL 2 BASIC21.63■■□□□ 1.05
Nek11Q8C0Q4 Nudt8-203ENSMUST00000122924 1082 ntTSL 2 BASIC21.63■■□□□ 1.05
Nek11Q8C0Q4 Hist2h2ac-201ENSMUST00000090782 520 ntAPPRIS P1 BASIC21.63■■□□□ 1.05
Nek11Q8C0Q4 Tmem39b-201ENSMUST00000102588 1810 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Nek11Q8C0Q4 Pcbp1-201ENSMUST00000053015 1830 ntAPPRIS P1 BASIC21.63■■□□□ 1.05
Nek11Q8C0Q4 Irx5-201ENSMUST00000034184 2450 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Nek11Q8C0Q4 Rab5c-202ENSMUST00000107364 1915 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Nek11Q8C0Q4 Phf14-202ENSMUST00000115510 3353 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
Nek11Q8C0Q4 Adcy3-202ENSMUST00000124505 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Nek11Q8C0Q4 Tssk6-201ENSMUST00000050373 1335 ntAPPRIS P1 BASIC21.62■■□□□ 1.05
Nek11Q8C0Q4 Rpl27-202ENSMUST00000107249 732 ntAPPRIS P1 TSL 2 BASIC21.62■■□□□ 1.05
Nek11Q8C0Q4 Nnat-210ENSMUST00000173839 1135 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
Nek11Q8C0Q4 Gm29257-201ENSMUST00000186115 639 ntBASIC21.62■■□□□ 1.05
Nek11Q8C0Q4 Gtf2h2-201ENSMUST00000066940 1065 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
Nek11Q8C0Q4 Sec61a2-202ENSMUST00000102981 2448 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Nek11Q8C0Q4 Ddx39b-201ENSMUST00000068056 1739 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Nek11Q8C0Q4 Zfp78-205ENSMUST00000208030 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC21.62■■□□□ 1.05
Nek11Q8C0Q4 Cenpa-205ENSMUST00000144742 1466 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Nek11Q8C0Q4 Gabbr1-201ENSMUST00000025338 5248 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Nek11Q8C0Q4 Gm45472-201ENSMUST00000211295 1426 ntTSL 5 BASIC21.62■■□□□ 1.05
Nek11Q8C0Q4 Magi2-203ENSMUST00000115267 4478 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
Nek11Q8C0Q4 Mtx1-201ENSMUST00000073572 1617 ntAPPRIS P2 TSL 1 (best) BASIC21.62■■□□□ 1.05
Nek11Q8C0Q4 Tex264-203ENSMUST00000169068 1364 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Nek11Q8C0Q4 Gm11549-201ENSMUST00000124606 2829 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Nek11Q8C0Q4 Ache-202ENSMUST00000085934 2176 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Nek11Q8C0Q4 Fez2-201ENSMUST00000070039 1939 ntAPPRIS P3 TSL 1 (best) BASIC21.61■■□□□ 1.05
Nek11Q8C0Q4 Lrfn4-202ENSMUST00000113822 2918 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Nek11Q8C0Q4 Aldh7a1-206ENSMUST00000172734 1880 ntTSL 5 BASIC21.61■■□□□ 1.05
Nek11Q8C0Q4 Bsg-202ENSMUST00000105381 1240 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
Nek11Q8C0Q4 Tspan2-203ENSMUST00000196611 682 ntTSL 5 BASIC21.61■■□□□ 1.05
Nek11Q8C0Q4 6230400D17Rik-202ENSMUST00000224976 1019 ntBASIC21.61■■□□□ 1.05
Nek11Q8C0Q4 Wnt10b-205ENSMUST00000226846 1204 ntBASIC21.61■■□□□ 1.05
Nek11Q8C0Q4 D930007J09Rik-201ENSMUST00000057911 393 ntAPPRIS P1 BASIC21.61■■□□□ 1.05
Nek11Q8C0Q4 Usp21-201ENSMUST00000065941 2219 ntAPPRIS P2 TSL 1 (best) BASIC21.61■■□□□ 1.05
Nek11Q8C0Q4 Coq5-201ENSMUST00000040421 2037 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Retrieved 100 of 76,532 protein–RNA pairs in 41.6 ms