Protein–RNA interactions for Protein: Q8BZT2

Sh3rf2, Putative E3 ubiquitin-protein ligase SH3RF2, mousemouse

Predictions only

Length 735 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3rf2Q8BZT2 B230208B08Rik-201ENSMUST00000173049 404 ntTSL 3 BASIC18.51■□□□□ 0.55
Sh3rf2Q8BZT2 Gm20635-201ENSMUST00000176473 1287 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Sh3rf2Q8BZT2 Gabarapl1-202ENSMUST00000204487 902 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Sh3rf2Q8BZT2 Fam57a-201ENSMUST00000094014 2130 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Sh3rf2Q8BZT2 Gabbr1-201ENSMUST00000025338 5248 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Sh3rf2Q8BZT2 Espn-211ENSMUST00000105657 1375 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Sh3rf2Q8BZT2 B3gat2-202ENSMUST00000140583 1737 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Sh3rf2Q8BZT2 Tmem79-203ENSMUST00000107553 2053 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Sh3rf2Q8BZT2 Dpf1-203ENSMUST00000108230 1553 ntTSL 5 BASIC18.51■□□□□ 0.55
Sh3rf2Q8BZT2 Dbr1-201ENSMUST00000066650 2261 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Sh3rf2Q8BZT2 Slc35f4-202ENSMUST00000123534 2748 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Sh3rf2Q8BZT2 Epdr1-201ENSMUST00000002885 2363 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Sh3rf2Q8BZT2 Ndufv1-202ENSMUST00000128787 1436 ntAPPRIS ALT2 TSL 5 BASIC18.5■□□□□ 0.55
Sh3rf2Q8BZT2 Ndufv1-207ENSMUST00000134479 1438 ntTSL 5 BASIC18.5■□□□□ 0.55
Sh3rf2Q8BZT2 Cpne2-201ENSMUST00000048653 2342 ntAPPRIS P2 TSL 1 (best) BASIC18.5■□□□□ 0.55
Sh3rf2Q8BZT2 Cacfd1-202ENSMUST00000114004 2194 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Sh3rf2Q8BZT2 Fbxo47-201ENSMUST00000093939 2162 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Sh3rf2Q8BZT2 Zfp467-208ENSMUST00000114564 626 ntTSL 2 BASIC18.5■□□□□ 0.55
Sh3rf2Q8BZT2 Atp5c1-203ENSMUST00000114897 1166 ntAPPRIS P2 TSL 1 (best) BASIC18.5■□□□□ 0.55
Sh3rf2Q8BZT2 2510002D24Rik-204ENSMUST00000191388 995 ntTSL 5 BASIC18.5■□□□□ 0.55
Sh3rf2Q8BZT2 Gm38285-201ENSMUST00000192928 922 ntBASIC18.5■□□□□ 0.55
Sh3rf2Q8BZT2 Fgf8-202ENSMUST00000026241 1168 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Sh3rf2Q8BZT2 Ccdc112-201ENSMUST00000072835 2801 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
Sh3rf2Q8BZT2 Lsp1-204ENSMUST00000105967 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
Sh3rf2Q8BZT2 Hdhd5-201ENSMUST00000075303 1928 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Sh3rf2Q8BZT2 Gm15853-202ENSMUST00000195518 2041 ntBASIC18.5■□□□□ 0.55
Sh3rf2Q8BZT2 Chst7-201ENSMUST00000044138 2206 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Sh3rf2Q8BZT2 Ndfip2-206ENSMUST00000181969 2532 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Sh3rf2Q8BZT2 Eif4h-205ENSMUST00000202622 2726 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
Sh3rf2Q8BZT2 Chd3os-201ENSMUST00000129321 2081 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Sh3rf2Q8BZT2 Fzd8-201ENSMUST00000041080 3346 ntAPPRIS P1 BASIC18.49■□□□□ 0.55
Sh3rf2Q8BZT2 Acvr1-201ENSMUST00000056376 2394 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Sh3rf2Q8BZT2 Maml1-201ENSMUST00000059458 5528 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Sh3rf2Q8BZT2 Bmpr1b-203ENSMUST00000106230 2147 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Sh3rf2Q8BZT2 Tifa-201ENSMUST00000054483 2245 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Sh3rf2Q8BZT2 Gm14321-201ENSMUST00000127441 632 ntTSL 3 BASIC18.49■□□□□ 0.55
Sh3rf2Q8BZT2 Gm10138-203ENSMUST00000206952 366 ntBASIC18.49■□□□□ 0.55
Sh3rf2Q8BZT2 Gm16475-201ENSMUST00000207306 512 ntTSL 2 BASIC18.49■□□□□ 0.55
Sh3rf2Q8BZT2 Tmem192-201ENSMUST00000026595 1122 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Sh3rf2Q8BZT2 Aadat-201ENSMUST00000079472 1972 ntAPPRIS P2 TSL 1 (best) BASIC18.49■□□□□ 0.55
Sh3rf2Q8BZT2 5730507C01Rik-201ENSMUST00000063216 2431 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
Sh3rf2Q8BZT2 Slc39a5-202ENSMUST00000167859 2025 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Sh3rf2Q8BZT2 Tpra1-223ENSMUST00000204765 1738 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Sh3rf2Q8BZT2 4930461C15Rik-201ENSMUST00000133622 1302 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Sh3rf2Q8BZT2 Rasgef1a-201ENSMUST00000164960 3284 ntAPPRIS ALT2 TSL 5 BASIC18.48■□□□□ 0.55
Sh3rf2Q8BZT2 Aldh7a1-206ENSMUST00000172734 1880 ntTSL 5 BASIC18.48■□□□□ 0.55
Sh3rf2Q8BZT2 Tmem145-202ENSMUST00000119703 1781 ntAPPRIS ALT2 TSL 5 BASIC18.48■□□□□ 0.55
Sh3rf2Q8BZT2 Zfp668-202ENSMUST00000106261 2410 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Sh3rf2Q8BZT2 Fgfrl1-201ENSMUST00000013633 2329 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Sh3rf2Q8BZT2 Cxxc4-201ENSMUST00000166288 1290 ntAPPRIS ALT2 TSL 5 BASIC18.48■□□□□ 0.55
Sh3rf2Q8BZT2 Kcnt1-203ENSMUST00000114172 5219 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
Sh3rf2Q8BZT2 Mmp15-201ENSMUST00000034243 5135 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Sh3rf2Q8BZT2 Sybu-208ENSMUST00000228057 3026 ntAPPRIS ALT2 BASIC18.48■□□□□ 0.55
Sh3rf2Q8BZT2 Gnb2-204ENSMUST00000111027 1610 ntTSL 5 BASIC18.48■□□□□ 0.55
Sh3rf2Q8BZT2 Pon1-201ENSMUST00000002663 1513 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Sh3rf2Q8BZT2 Srp68-201ENSMUST00000021133 2526 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Sh3rf2Q8BZT2 Znrf1-205ENSMUST00000172856 4600 ntAPPRIS P1 TSL 5 BASIC18.48■□□□□ 0.55
Sh3rf2Q8BZT2 Tmed3-201ENSMUST00000058488 1346 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Sh3rf2Q8BZT2 Rncr4-201ENSMUST00000194541 2234 ntBASIC18.47■□□□□ 0.55
Sh3rf2Q8BZT2 Zfp579-206ENSMUST00000162731 2489 ntAPPRIS P1 BASIC18.47■□□□□ 0.55
Sh3rf2Q8BZT2 Rnf146-203ENSMUST00000160372 1948 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Sh3rf2Q8BZT2 Wnk2-204ENSMUST00000110096 6534 ntAPPRIS ALT2 TSL 5 BASIC18.47■□□□□ 0.55
Sh3rf2Q8BZT2 AL591207.1-203ENSMUST00000222401 1380 ntTSL 5 BASIC18.47■□□□□ 0.55
Sh3rf2Q8BZT2 Gm16127-201ENSMUST00000131619 234 ntTSL 5 BASIC18.47■□□□□ 0.55
Sh3rf2Q8BZT2 Gm20695-202ENSMUST00000176233 1012 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
Sh3rf2Q8BZT2 Mrps12-201ENSMUST00000056078 722 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Sh3rf2Q8BZT2 Bmyc-201ENSMUST00000061483 983 ntAPPRIS P1 BASIC18.47■□□□□ 0.55
Sh3rf2Q8BZT2 5330438D12Rik-201ENSMUST00000064101 2229 ntBASIC18.47■□□□□ 0.55
Sh3rf2Q8BZT2 Hnrnpd-211ENSMUST00000172361 6811 ntAPPRIS P4 TSL 1 (best) BASIC18.47■□□□□ 0.55
Sh3rf2Q8BZT2 Rab5c-202ENSMUST00000107364 1915 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Sh3rf2Q8BZT2 Keap1-204ENSMUST00000193982 2163 ntAPPRIS P2 TSL 1 (best) BASIC18.47■□□□□ 0.55
Sh3rf2Q8BZT2 Phox2b-201ENSMUST00000012664 3013 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Sh3rf2Q8BZT2 Dpf1-202ENSMUST00000065181 1574 ntAPPRIS ALT1 TSL 5 BASIC18.47■□□□□ 0.55
Sh3rf2Q8BZT2 Gorasp2-202ENSMUST00000112201 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
Sh3rf2Q8BZT2 Fmnl2-201ENSMUST00000049483 5461 ntTSL 5 BASIC18.46■□□□□ 0.55
Sh3rf2Q8BZT2 Pacsin3-203ENSMUST00000111349 1993 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Sh3rf2Q8BZT2 Lamp1-201ENSMUST00000033824 2229 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Sh3rf2Q8BZT2 Lmtk3-204ENSMUST00000209617 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
Sh3rf2Q8BZT2 Luc7l2-201ENSMUST00000057692 2702 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Sh3rf2Q8BZT2 Celf6-203ENSMUST00000118549 2973 ntAPPRIS ALT2 TSL 5 BASIC18.46■□□□□ 0.55
Sh3rf2Q8BZT2 Tbc1d25-201ENSMUST00000039892 2648 ntAPPRIS P3 TSL 1 (best) BASIC18.46■□□□□ 0.55
Sh3rf2Q8BZT2 Rraga-201ENSMUST00000091064 1618 ntAPPRIS P1 BASIC18.46■□□□□ 0.55
Sh3rf2Q8BZT2 Lingo1-203ENSMUST00000114256 2782 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Sh3rf2Q8BZT2 Phb-204ENSMUST00000125172 1799 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Sh3rf2Q8BZT2 Gm26634-201ENSMUST00000181146 1511 ntTSL 5 BASIC18.46■□□□□ 0.55
Sh3rf2Q8BZT2 Rhno1-202ENSMUST00000112151 1108 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Sh3rf2Q8BZT2 Gm16998-201ENSMUST00000181899 1230 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Sh3rf2Q8BZT2 Zfp787-204ENSMUST00000207628 576 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Sh3rf2Q8BZT2 Arfip2-212ENSMUST00000209550 1141 ntAPPRIS ALT1 TSL 5 BASIC18.46■□□□□ 0.55
Sh3rf2Q8BZT2 Arfip2-214ENSMUST00000210911 938 ntTSL 5 BASIC18.46■□□□□ 0.55
Sh3rf2Q8BZT2 Gm7579-201ENSMUST00000097943 732 ntAPPRIS P1 BASIC18.46■□□□□ 0.55
Sh3rf2Q8BZT2 Mgat4b-201ENSMUST00000041725 2429 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Sh3rf2Q8BZT2 Gm26689-201ENSMUST00000180927 1818 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Sh3rf2Q8BZT2 Gm26553-201ENSMUST00000181531 1818 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Sh3rf2Q8BZT2 Cbx1-201ENSMUST00000018810 1824 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Sh3rf2Q8BZT2 Faxc-201ENSMUST00000029908 2627 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Sh3rf2Q8BZT2 Commd7-202ENSMUST00000109782 1343 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Sh3rf2Q8BZT2 Cenpa-205ENSMUST00000144742 1466 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.54
Sh3rf2Q8BZT2 Pou3f1-201ENSMUST00000053491 3849 ntAPPRIS P1 BASIC18.45■□□□□ 0.54
Sh3rf2Q8BZT2 Nanp-201ENSMUST00000066640 1394 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Retrieved 100 of 76,532 protein–RNA pairs in 19 ms