Protein–RNA interactions for Protein: Q8BT60

Cpne3, Copine-3, mousemouse

Predictions only

Length 533 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpne3Q8BT60 Psen2-202ENSMUST00000111104 1475 ntAPPRIS ALT1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Cpne3Q8BT60 Rnf44-204ENSMUST00000125871 4292 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Cpne3Q8BT60 Avl9-201ENSMUST00000031805 6670 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Cpne3Q8BT60 Dpf1-203ENSMUST00000108230 1553 ntTSL 5 BASIC17.63■□□□□ 0.41
Cpne3Q8BT60 Nt5c3b-204ENSMUST00000107398 1635 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Cpne3Q8BT60 Gm26971-201ENSMUST00000182423 1072 ntBASIC17.63■□□□□ 0.41
Cpne3Q8BT60 Gamt-201ENSMUST00000020359 979 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Cpne3Q8BT60 Gm19094-201ENSMUST00000209791 1246 ntBASIC17.63■□□□□ 0.41
Cpne3Q8BT60 Nudt14-202ENSMUST00000221397 1241 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Cpne3Q8BT60 Areg-201ENSMUST00000031325 1215 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Cpne3Q8BT60 Zcchc13-201ENSMUST00000033692 1085 ntAPPRIS P1 BASIC17.63■□□□□ 0.41
Cpne3Q8BT60 Mmp17-201ENSMUST00000031390 6422 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Cpne3Q8BT60 Spc24-205ENSMUST00000217382 1696 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Cpne3Q8BT60 AU019823-202ENSMUST00000145139 2805 ntTSL 2 BASIC17.63■□□□□ 0.41
Cpne3Q8BT60 Arfrp1-209ENSMUST00000170190 2483 ntTSL 5 BASIC17.63■□□□□ 0.41
Cpne3Q8BT60 Dolk-201ENSMUST00000100219 2104 ntAPPRIS P1 BASIC17.63■□□□□ 0.41
Cpne3Q8BT60 Arid3c-204ENSMUST00000171251 1751 ntAPPRIS P3 TSL 5 BASIC17.63■□□□□ 0.41
Cpne3Q8BT60 Lin7a-203ENSMUST00000218031 1769 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Cpne3Q8BT60 Med14-201ENSMUST00000076016 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Cpne3Q8BT60 Nf2-205ENSMUST00000109910 4720 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
Cpne3Q8BT60 Unc13b-201ENSMUST00000079978 6354 ntAPPRIS P2 TSL 5 BASIC17.63■□□□□ 0.41
Cpne3Q8BT60 Gm10167-201ENSMUST00000150411 1479 ntBASIC17.63■□□□□ 0.41
Cpne3Q8BT60 Marc2-201ENSMUST00000068725 1917 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Cpne3Q8BT60 Gabra4-205ENSMUST00000199357 2407 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Cpne3Q8BT60 Tymp-201ENSMUST00000023285 2037 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Cpne3Q8BT60 Uhmk1-201ENSMUST00000027979 7864 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Cpne3Q8BT60 Lrrc43-201ENSMUST00000094327 2046 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
Cpne3Q8BT60 Ppp1r3f-205ENSMUST00000150787 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Cpne3Q8BT60 Gm26884-201ENSMUST00000181207 3074 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Cpne3Q8BT60 Krcc1-203ENSMUST00000204436 1687 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Cpne3Q8BT60 Gm10575-201ENSMUST00000097947 1671 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Cpne3Q8BT60 Gm35558-201ENSMUST00000222675 2219 ntBASIC17.62■□□□□ 0.41
Cpne3Q8BT60 Tm2d1-202ENSMUST00000102793 1027 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Cpne3Q8BT60 Dusp15-202ENSMUST00000109811 753 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Cpne3Q8BT60 Gm20532-201ENSMUST00000174066 780 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
Cpne3Q8BT60 Tor2a-208ENSMUST00000177382 396 ntTSL 5 BASIC17.62■□□□□ 0.41
Cpne3Q8BT60 Snrpd3-203ENSMUST00000220229 442 ntTSL 3 BASIC17.62■□□□□ 0.41
Cpne3Q8BT60 Rpl13-201ENSMUST00000000756 780 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Cpne3Q8BT60 Map3k5-201ENSMUST00000095806 5450 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Cpne3Q8BT60 Igsf9b-201ENSMUST00000115247 2857 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Cpne3Q8BT60 Gm26995-201ENSMUST00000182216 1306 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Cpne3Q8BT60 Olfr94-201ENSMUST00000055324 1304 ntAPPRIS P2 BASIC17.62■□□□□ 0.41
Cpne3Q8BT60 Pip5k1c-202ENSMUST00000105327 2551 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
Cpne3Q8BT60 Dlg1-205ENSMUST00000115201 3248 ntTSL 5 BASIC17.62■□□□□ 0.41
Cpne3Q8BT60 Gm26634-201ENSMUST00000181146 1511 ntTSL 5 BASIC17.62■□□□□ 0.41
Cpne3Q8BT60 Fbxo24-202ENSMUST00000111002 2306 ntTSL 5 BASIC17.61■□□□□ 0.41
Cpne3Q8BT60 Dtnb-222ENSMUST00000174479 3689 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Cpne3Q8BT60 Akt2-205ENSMUST00000108344 4544 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Cpne3Q8BT60 Gm9954-202ENSMUST00000198686 4725 ntBASIC17.61■□□□□ 0.41
Cpne3Q8BT60 Mfsd10-201ENSMUST00000001109 1907 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Cpne3Q8BT60 Mid1-203ENSMUST00000079443 2815 ntTSL 5 BASIC17.61■□□□□ 0.41
Cpne3Q8BT60 0610040J01Rik-201ENSMUST00000081747 2008 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Cpne3Q8BT60 Vax2os-202ENSMUST00000150233 595 ntTSL 3 BASIC17.61■□□□□ 0.41
Cpne3Q8BT60 Gm45168-202ENSMUST00000206461 1069 ntTSL 5 BASIC17.61■□□□□ 0.41
Cpne3Q8BT60 Fam228b-205ENSMUST00000218575 1281 ntAPPRIS ALT2 TSL 2 BASIC17.61■□□□□ 0.41
Cpne3Q8BT60 Grk6-206ENSMUST00000224995 2971 ntBASIC17.61■□□□□ 0.41
Cpne3Q8BT60 Mrpl40-201ENSMUST00000023391 1185 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Cpne3Q8BT60 Mcrip2-201ENSMUST00000026828 816 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Cpne3Q8BT60 Chka-201ENSMUST00000025760 2319 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
Cpne3Q8BT60 Ocel1-203ENSMUST00000110052 5285 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Cpne3Q8BT60 Stx4a-201ENSMUST00000033075 1456 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Cpne3Q8BT60 Foxp1-230ENSMUST00000177437 2468 ntAPPRIS P2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Cpne3Q8BT60 Zxdc-203ENSMUST00000113539 4864 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Cpne3Q8BT60 Usp6nl-202ENSMUST00000114937 7484 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Cpne3Q8BT60 Tcp1-201ENSMUST00000089024 1902 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Cpne3Q8BT60 Maff-201ENSMUST00000096350 1933 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Cpne3Q8BT60 Cdca4-202ENSMUST00000220899 1994 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Cpne3Q8BT60 Gfra3-201ENSMUST00000025224 1992 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Cpne3Q8BT60 Lhfp-201ENSMUST00000059562 2108 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Cpne3Q8BT60 B4galt4-205ENSMUST00000114712 2168 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Cpne3Q8BT60 Prkaca-201ENSMUST00000005606 2276 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Cpne3Q8BT60 Shank3-203ENSMUST00000109309 7365 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Cpne3Q8BT60 Nr4a1-201ENSMUST00000023779 2474 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Cpne3Q8BT60 Cckbr-201ENSMUST00000033189 2573 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Cpne3Q8BT60 Gpr162-204ENSMUST00000204667 2855 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Cpne3Q8BT60 Fam46c-201ENSMUST00000061455 5640 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Cpne3Q8BT60 Mpc1-208ENSMUST00000155364 958 ntAPPRIS P1 TSL 2 BASIC17.6■□□□□ 0.41
Cpne3Q8BT60 Kctd17-206ENSMUST00000162517 901 ntAPPRIS P4 TSL 1 (best) BASIC17.6■□□□□ 0.41
Cpne3Q8BT60 Kctd17-209ENSMUST00000166142 826 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Cpne3Q8BT60 Crnde-206ENSMUST00000179421 773 ntTSL 3 BASIC17.6■□□□□ 0.41
Cpne3Q8BT60 Olfr718-ps1-204ENSMUST00000218872 963 ntAPPRIS ALT2 BASIC17.6■□□□□ 0.41
Cpne3Q8BT60 Fdx1-201ENSMUST00000034552 875 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Cpne3Q8BT60 E130116L18Rik-201ENSMUST00000066954 306 ntAPPRIS P1 BASIC17.6■□□□□ 0.41
Cpne3Q8BT60 Hsd17b2-201ENSMUST00000034304 1320 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Cpne3Q8BT60 1700065D16Rik-204ENSMUST00000189348 1540 ntTSL 2 BASIC17.6■□□□□ 0.41
Cpne3Q8BT60 Nfe2-210ENSMUST00000156927 1608 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
Cpne3Q8BT60 Esx1-201ENSMUST00000074698 1600 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Cpne3Q8BT60 Hbs1l-202ENSMUST00000061324 1998 ntTSL 3 BASIC17.6■□□□□ 0.41
Cpne3Q8BT60 Gm10300-201ENSMUST00000094662 2296 ntAPPRIS P1 BASIC17.6■□□□□ 0.41
Cpne3Q8BT60 Dus3l-201ENSMUST00000007747 2303 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Cpne3Q8BT60 Cyth2-202ENSMUST00000107729 2519 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Cpne3Q8BT60 Sdcbp-201ENSMUST00000029912 2745 ntAPPRIS ALT1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Cpne3Q8BT60 Pcdh7-201ENSMUST00000068110 5611 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
Cpne3Q8BT60 Klhdc1-201ENSMUST00000063445 2620 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Cpne3Q8BT60 Spata2l-201ENSMUST00000098327 2380 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Cpne3Q8BT60 Zfp78-205ENSMUST00000208030 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Cpne3Q8BT60 Tsks-202ENSMUST00000120929 1843 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Cpne3Q8BT60 Hoxc6-201ENSMUST00000001711 1581 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Cpne3Q8BT60 Tagln-201ENSMUST00000034590 1595 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Cpne3Q8BT60 4930471E19Rik-201ENSMUST00000219022 1514 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Retrieved 100 of 76,532 protein–RNA pairs in 13.4 ms