Protein–RNA interactions for Protein: Q8BQZ5

Cpsf4, Cleavage and polyadenylation specificity factor subunit 4, mousemouse

Known RBP Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpsf4Q8BQZ5 Gm15853-202ENSMUST00000195518 2041 ntBASIC17.71■□□□□ 0.43
Cpsf4Q8BQZ5 Atp9a-203ENSMUST00000109176 3691 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Cpsf4Q8BQZ5 Syncrip-205ENSMUST00000173801 2944 ntAPPRIS ALT1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Cpsf4Q8BQZ5 Swsap1-201ENSMUST00000053583 1838 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Cpsf4Q8BQZ5 Atraid-201ENSMUST00000013766 966 ntAPPRIS P2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Cpsf4Q8BQZ5 Ccdc85b-201ENSMUST00000179549 609 ntAPPRIS P1 BASIC17.71■□□□□ 0.43
Cpsf4Q8BQZ5 Gm6420-201ENSMUST00000193885 723 ntBASIC17.71■□□□□ 0.43
Cpsf4Q8BQZ5 Sec61a2-202ENSMUST00000102981 2448 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Cpsf4Q8BQZ5 Itsn1-201ENSMUST00000056482 5364 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Cpsf4Q8BQZ5 Slc35d2-201ENSMUST00000099441 2303 ntAPPRIS P2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Cpsf4Q8BQZ5 Cbx2-201ENSMUST00000026662 3807 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Cpsf4Q8BQZ5 Gclm-201ENSMUST00000029769 5589 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
Cpsf4Q8BQZ5 B4gat1-201ENSMUST00000053705 2035 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
Cpsf4Q8BQZ5 Galnt9-201ENSMUST00000040001 2883 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Cpsf4Q8BQZ5 Trim58-201ENSMUST00000075084 2192 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Cpsf4Q8BQZ5 Lsp1-202ENSMUST00000038946 1828 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
Cpsf4Q8BQZ5 Hs6st1-201ENSMUST00000088174 3719 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Cpsf4Q8BQZ5 Gm15155-201ENSMUST00000112542 1009 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Cpsf4Q8BQZ5 Gm12216-203ENSMUST00000121435 655 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
Cpsf4Q8BQZ5 Mpc1-208ENSMUST00000155364 958 ntAPPRIS P1 TSL 2 BASIC17.7■□□□□ 0.42
Cpsf4Q8BQZ5 Gm4881-201ENSMUST00000206705 1152 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
Cpsf4Q8BQZ5 Gm44732-201ENSMUST00000208055 635 ntTSL 3 BASIC17.7■□□□□ 0.42
Cpsf4Q8BQZ5 Med30-201ENSMUST00000037115 1007 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Cpsf4Q8BQZ5 Hist1h2ao-201ENSMUST00000091745 480 ntAPPRIS P1 BASIC17.7■□□□□ 0.42
Cpsf4Q8BQZ5 Dmtn-210ENSMUST00000228824 2377 ntBASIC17.7■□□□□ 0.42
Cpsf4Q8BQZ5 Tob1-201ENSMUST00000041589 2288 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Cpsf4Q8BQZ5 Cacna1b-202ENSMUST00000070864 9655 ntAPPRIS P3 TSL 5 BASIC17.7■□□□□ 0.42
Cpsf4Q8BQZ5 Prmt9-201ENSMUST00000056237 2781 ntAPPRIS P2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Cpsf4Q8BQZ5 Mink1-205ENSMUST00000102559 4865 ntAPPRIS P4 TSL 1 (best) BASIC17.7■□□□□ 0.42
Cpsf4Q8BQZ5 Unc50-201ENSMUST00000027285 1414 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Cpsf4Q8BQZ5 Pcnx-204ENSMUST00000221721 8318 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
Cpsf4Q8BQZ5 Sbf1-205ENSMUST00000144585 6165 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Cpsf4Q8BQZ5 Dao-201ENSMUST00000086599 1525 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Cpsf4Q8BQZ5 Osbpl1a-203ENSMUST00000118313 2893 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Cpsf4Q8BQZ5 Snx20-201ENSMUST00000034087 1699 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Cpsf4Q8BQZ5 Gm39115-201ENSMUST00000211350 699 ntAPPRIS P1 BASIC17.69■□□□□ 0.42
Cpsf4Q8BQZ5 Pts-208ENSMUST00000215416 439 ntTSL 2 BASIC17.69■□□□□ 0.42
Cpsf4Q8BQZ5 Hoxc12-201ENSMUST00000055562 1031 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Cpsf4Q8BQZ5 Nfatc3-201ENSMUST00000109308 5984 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Cpsf4Q8BQZ5 Gm5953-201ENSMUST00000220644 2616 ntBASIC17.69■□□□□ 0.42
Cpsf4Q8BQZ5 5330438D12Rik-201ENSMUST00000064101 2229 ntBASIC17.69■□□□□ 0.42
Cpsf4Q8BQZ5 Cd37-209ENSMUST00000211373 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Cpsf4Q8BQZ5 Ppp1r3g-203ENSMUST00000225537 2389 ntAPPRIS P1 BASIC17.69■□□□□ 0.42
Cpsf4Q8BQZ5 Mtcl1-202ENSMUST00000097291 7274 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Cpsf4Q8BQZ5 Ebf3-204ENSMUST00000169486 4994 ntAPPRIS ALT1 TSL 5 BASIC17.69■□□□□ 0.42
Cpsf4Q8BQZ5 Gm3020-202ENSMUST00000167430 1933 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Cpsf4Q8BQZ5 Gm10409-201ENSMUST00000170123 1933 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Cpsf4Q8BQZ5 Ism1-201ENSMUST00000099307 2944 ntTSL 5 BASIC17.68■□□□□ 0.42
Cpsf4Q8BQZ5 Pnck-202ENSMUST00000114472 1532 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Cpsf4Q8BQZ5 Sigmar1-202ENSMUST00000071561 1547 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Cpsf4Q8BQZ5 Plin5-202ENSMUST00000113072 1986 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Cpsf4Q8BQZ5 Runx1-203ENSMUST00000168195 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Cpsf4Q8BQZ5 Cdkl3-207ENSMUST00000109080 2749 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Cpsf4Q8BQZ5 Hcn2-202ENSMUST00000099513 3195 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Cpsf4Q8BQZ5 Tmem203-201ENSMUST00000104998 854 ntAPPRIS P1 BASIC17.68■□□□□ 0.42
Cpsf4Q8BQZ5 Sarnp-201ENSMUST00000105230 918 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Cpsf4Q8BQZ5 Nespas-201ENSMUST00000143738 1083 ntBASIC17.68■□□□□ 0.42
Cpsf4Q8BQZ5 E130307A14Rik-208ENSMUST00000145971 830 ntTSL 3 BASIC17.68■□□□□ 0.42
Cpsf4Q8BQZ5 Gm45121-201ENSMUST00000205396 1153 ntTSL 5 BASIC17.68■□□□□ 0.42
Cpsf4Q8BQZ5 Fam228b-205ENSMUST00000218575 1281 ntAPPRIS ALT2 TSL 2 BASIC17.68■□□□□ 0.42
Cpsf4Q8BQZ5 Arl10-201ENSMUST00000026988 1046 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Cpsf4Q8BQZ5 Dach1-202ENSMUST00000071533 5219 ntAPPRIS P4 TSL 1 (best) BASIC17.68■□□□□ 0.42
Cpsf4Q8BQZ5 Pqlc1-201ENSMUST00000070135 1911 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Cpsf4Q8BQZ5 Glra1-203ENSMUST00000108853 1797 ntTSL 5 BASIC17.68■□□□□ 0.42
Cpsf4Q8BQZ5 9430060I03Rik-201ENSMUST00000191563 1689 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Cpsf4Q8BQZ5 Insig2-201ENSMUST00000003818 2697 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Cpsf4Q8BQZ5 Anapc16-204ENSMUST00000182898 1852 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Cpsf4Q8BQZ5 Kcns1-201ENSMUST00000045196 2712 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Cpsf4Q8BQZ5 Ubtf-204ENSMUST00000107117 3258 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
Cpsf4Q8BQZ5 A830035A12Rik-201ENSMUST00000147445 861 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Cpsf4Q8BQZ5 Gm27032-201ENSMUST00000183124 1116 ntBASIC17.67■□□□□ 0.42
Cpsf4Q8BQZ5 Pop5-201ENSMUST00000081497 1025 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
Cpsf4Q8BQZ5 Tmem214-202ENSMUST00000201203 6110 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Cpsf4Q8BQZ5 Nkd1-201ENSMUST00000034086 3035 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Cpsf4Q8BQZ5 Pard3-209ENSMUST00000160272 5815 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Cpsf4Q8BQZ5 Rab7-202ENSMUST00000113596 1657 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Cpsf4Q8BQZ5 Scn1b-203ENSMUST00000211945 1501 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
Cpsf4Q8BQZ5 Gpc6-204ENSMUST00000125435 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Cpsf4Q8BQZ5 Man2a1-201ENSMUST00000086723 6991 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Cpsf4Q8BQZ5 Tgif1-209ENSMUST00000166395 1714 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Cpsf4Q8BQZ5 Snrnp70-201ENSMUST00000074575 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Cpsf4Q8BQZ5 Gm10655-201ENSMUST00000098658 1397 ntBASIC17.66■□□□□ 0.42
Cpsf4Q8BQZ5 Fgf11-201ENSMUST00000011285 2534 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Cpsf4Q8BQZ5 Gnptg-202ENSMUST00000115154 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Cpsf4Q8BQZ5 Hsp25-ps1-201ENSMUST00000109187 630 ntBASIC17.66■□□□□ 0.42
Cpsf4Q8BQZ5 C230062I16Rik-202ENSMUST00000207746 1022 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Cpsf4Q8BQZ5 Gucd1-211ENSMUST00000219774 806 ntTSL 3 BASIC17.66■□□□□ 0.42
Cpsf4Q8BQZ5 Tceanc2-201ENSMUST00000030362 935 ntAPPRIS P1 TSL 3 BASIC17.66■□□□□ 0.42
Cpsf4Q8BQZ5 5033430I15Rik-201ENSMUST00000038032 729 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Cpsf4Q8BQZ5 Nr1d2-201ENSMUST00000090543 4663 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Cpsf4Q8BQZ5 Igsf8-202ENSMUST00000085912 2182 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
Cpsf4Q8BQZ5 Dhx15-201ENSMUST00000031061 3010 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Cpsf4Q8BQZ5 Foxj1-201ENSMUST00000036215 2623 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Cpsf4Q8BQZ5 Chst7-201ENSMUST00000044138 2206 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Cpsf4Q8BQZ5 Pigw-201ENSMUST00000067058 2675 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Cpsf4Q8BQZ5 Gm26689-201ENSMUST00000180927 1818 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Cpsf4Q8BQZ5 Gm26553-201ENSMUST00000181531 1818 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Cpsf4Q8BQZ5 Ppm1n-201ENSMUST00000032560 1648 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Cpsf4Q8BQZ5 Psmd3-201ENSMUST00000017365 2148 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Cpsf4Q8BQZ5 AU019823-202ENSMUST00000145139 2805 ntTSL 2 BASIC17.65■□□□□ 0.42
Retrieved 100 of 76,532 protein–RNA pairs in 22.3 ms