Protein–RNA interactions for Protein: Q8BQZ5

Cpsf4, Cleavage and polyadenylation specificity factor subunit 4, mousemouse

Known RBP Predictions only

Length 211 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpsf4Q8BQZ5 Gm15853-202ENSMUST00000195518 2041 ntBASIC17.71■□□□□ 0.43
Cpsf4Q8BQZ5 Atp9a-203ENSMUST00000109176 3691 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Cpsf4Q8BQZ5 Syncrip-205ENSMUST00000173801 2944 ntAPPRIS ALT1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Cpsf4Q8BQZ5 Swsap1-201ENSMUST00000053583 1838 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Cpsf4Q8BQZ5 Atraid-201ENSMUST00000013766 966 ntAPPRIS P2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Cpsf4Q8BQZ5 Ccdc85b-201ENSMUST00000179549 609 ntAPPRIS P1 BASIC17.71■□□□□ 0.43
Cpsf4Q8BQZ5 Gm6420-201ENSMUST00000193885 723 ntBASIC17.71■□□□□ 0.43
Cpsf4Q8BQZ5 Sec61a2-202ENSMUST00000102981 2448 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Cpsf4Q8BQZ5 Itsn1-201ENSMUST00000056482 5364 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Cpsf4Q8BQZ5 Slc35d2-201ENSMUST00000099441 2303 ntAPPRIS P2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Cpsf4Q8BQZ5 Cbx2-201ENSMUST00000026662 3807 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Cpsf4Q8BQZ5 Gclm-201ENSMUST00000029769 5589 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
Cpsf4Q8BQZ5 B4gat1-201ENSMUST00000053705 2035 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
Cpsf4Q8BQZ5 Galnt9-201ENSMUST00000040001 2883 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Cpsf4Q8BQZ5 Trim58-201ENSMUST00000075084 2192 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Cpsf4Q8BQZ5 Lsp1-202ENSMUST00000038946 1828 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
Cpsf4Q8BQZ5 Hs6st1-201ENSMUST00000088174 3719 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Cpsf4Q8BQZ5 Gm15155-201ENSMUST00000112542 1009 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Cpsf4Q8BQZ5 Gm12216-203ENSMUST00000121435 655 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
Cpsf4Q8BQZ5 Mpc1-208ENSMUST00000155364 958 ntAPPRIS P1 TSL 2 BASIC17.7■□□□□ 0.42
Cpsf4Q8BQZ5 Gm4881-201ENSMUST00000206705 1152 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
Cpsf4Q8BQZ5 Gm44732-201ENSMUST00000208055 635 ntTSL 3 BASIC17.7■□□□□ 0.42
Cpsf4Q8BQZ5 Med30-201ENSMUST00000037115 1007 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Cpsf4Q8BQZ5 Hist1h2ao-201ENSMUST00000091745 480 ntAPPRIS P1 BASIC17.7■□□□□ 0.42
Cpsf4Q8BQZ5 Dmtn-210ENSMUST00000228824 2377 ntBASIC17.7■□□□□ 0.42
Cpsf4Q8BQZ5 Tob1-201ENSMUST00000041589 2288 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Cpsf4Q8BQZ5 Cacna1b-202ENSMUST00000070864 9655 ntAPPRIS P3 TSL 5 BASIC17.7■□□□□ 0.42
Cpsf4Q8BQZ5 Prmt9-201ENSMUST00000056237 2781 ntAPPRIS P2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Cpsf4Q8BQZ5 Mink1-205ENSMUST00000102559 4865 ntAPPRIS P4 TSL 1 (best) BASIC17.7■□□□□ 0.42
Cpsf4Q8BQZ5 Unc50-201ENSMUST00000027285 1414 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Cpsf4Q8BQZ5 Pcnx-204ENSMUST00000221721 8318 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
Cpsf4Q8BQZ5 Sbf1-205ENSMUST00000144585 6165 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Cpsf4Q8BQZ5 Dao-201ENSMUST00000086599 1525 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Cpsf4Q8BQZ5 Osbpl1a-203ENSMUST00000118313 2893 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Cpsf4Q8BQZ5 Snx20-201ENSMUST00000034087 1699 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Cpsf4Q8BQZ5 Gm39115-201ENSMUST00000211350 699 ntAPPRIS P1 BASIC17.69■□□□□ 0.42
Cpsf4Q8BQZ5 Pts-208ENSMUST00000215416 439 ntTSL 2 BASIC17.69■□□□□ 0.42
Cpsf4Q8BQZ5 Hoxc12-201ENSMUST00000055562 1031 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Cpsf4Q8BQZ5 Nfatc3-201ENSMUST00000109308 5984 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Cpsf4Q8BQZ5 Gm5953-201ENSMUST00000220644 2616 ntBASIC17.69■□□□□ 0.42
Cpsf4Q8BQZ5 5330438D12Rik-201ENSMUST00000064101 2229 ntBASIC17.69■□□□□ 0.42
Cpsf4Q8BQZ5 Cd37-209ENSMUST00000211373 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Cpsf4Q8BQZ5 Ppp1r3g-203ENSMUST00000225537 2389 ntAPPRIS P1 BASIC17.69■□□□□ 0.42
Cpsf4Q8BQZ5 Mtcl1-202ENSMUST00000097291 7274 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Cpsf4Q8BQZ5 Ebf3-204ENSMUST00000169486 4994 ntAPPRIS ALT1 TSL 5 BASIC17.69■□□□□ 0.42
Cpsf4Q8BQZ5 Gm3020-202ENSMUST00000167430 1933 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Cpsf4Q8BQZ5 Gm10409-201ENSMUST00000170123 1933 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Cpsf4Q8BQZ5 Ism1-201ENSMUST00000099307 2944 ntTSL 5 BASIC17.68■□□□□ 0.42
Cpsf4Q8BQZ5 Pnck-202ENSMUST00000114472 1532 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Cpsf4Q8BQZ5 Sigmar1-202ENSMUST00000071561 1547 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Cpsf4Q8BQZ5 Plin5-202ENSMUST00000113072 1986 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Cpsf4Q8BQZ5 Runx1-203ENSMUST00000168195 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Cpsf4Q8BQZ5 Cdkl3-207ENSMUST00000109080 2749 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Cpsf4Q8BQZ5 Hcn2-202ENSMUST00000099513 3195 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Cpsf4Q8BQZ5 Tmem203-201ENSMUST00000104998 854 ntAPPRIS P1 BASIC17.68■□□□□ 0.42
Cpsf4Q8BQZ5 Sarnp-201ENSMUST00000105230 918 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Cpsf4Q8BQZ5 Nespas-201ENSMUST00000143738 1083 ntBASIC17.68■□□□□ 0.42
Cpsf4Q8BQZ5 E130307A14Rik-208ENSMUST00000145971 830 ntTSL 3 BASIC17.68■□□□□ 0.42
Cpsf4Q8BQZ5 Gm45121-201ENSMUST00000205396 1153 ntTSL 5 BASIC17.68■□□□□ 0.42
Cpsf4Q8BQZ5 Fam228b-205ENSMUST00000218575 1281 ntAPPRIS ALT2 TSL 2 BASIC17.68■□□□□ 0.42
Cpsf4Q8BQZ5 Arl10-201ENSMUST00000026988 1046 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Cpsf4Q8BQZ5 Dach1-202ENSMUST00000071533 5219 ntAPPRIS P4 TSL 1 (best) BASIC17.68■□□□□ 0.42
Cpsf4Q8BQZ5 Pqlc1-201ENSMUST00000070135 1911 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Cpsf4Q8BQZ5 Glra1-203ENSMUST00000108853 1797 ntTSL 5 BASIC17.68■□□□□ 0.42
Cpsf4Q8BQZ5 9430060I03Rik-201ENSMUST00000191563 1689 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Cpsf4Q8BQZ5 Insig2-201ENSMUST00000003818 2697 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Cpsf4Q8BQZ5 Anapc16-204ENSMUST00000182898 1852 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Cpsf4Q8BQZ5 Kcns1-201ENSMUST00000045196 2712 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Cpsf4Q8BQZ5 Ubtf-204ENSMUST00000107117 3258 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
Cpsf4Q8BQZ5 A830035A12Rik-201ENSMUST00000147445 861 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Cpsf4Q8BQZ5 Gm27032-201ENSMUST00000183124 1116 ntBASIC17.67■□□□□ 0.42
Cpsf4Q8BQZ5 Pop5-201ENSMUST00000081497 1025 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
Cpsf4Q8BQZ5 Tmem214-202ENSMUST00000201203 6110 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Cpsf4Q8BQZ5 Nkd1-201ENSMUST00000034086 3035 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Cpsf4Q8BQZ5 Pard3-209ENSMUST00000160272 5815 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Cpsf4Q8BQZ5 Rab7-202ENSMUST00000113596 1657 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Cpsf4Q8BQZ5 Scn1b-203ENSMUST00000211945 1501 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
Cpsf4Q8BQZ5 Gpc6-204ENSMUST00000125435 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Cpsf4Q8BQZ5 Man2a1-201ENSMUST00000086723 6991 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Cpsf4Q8BQZ5 Tgif1-209ENSMUST00000166395 1714 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Cpsf4Q8BQZ5 Snrnp70-201ENSMUST00000074575 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Cpsf4Q8BQZ5 Gm10655-201ENSMUST00000098658 1397 ntBASIC17.66■□□□□ 0.42
Cpsf4Q8BQZ5 Fgf11-201ENSMUST00000011285 2534 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Cpsf4Q8BQZ5 Gnptg-202ENSMUST00000115154 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Cpsf4Q8BQZ5 Hsp25-ps1-201ENSMUST00000109187 630 ntBASIC17.66■□□□□ 0.42
Cpsf4Q8BQZ5 C230062I16Rik-202ENSMUST00000207746 1022 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Cpsf4Q8BQZ5 Gucd1-211ENSMUST00000219774 806 ntTSL 3 BASIC17.66■□□□□ 0.42
Cpsf4Q8BQZ5 Tceanc2-201ENSMUST00000030362 935 ntAPPRIS P1 TSL 3 BASIC17.66■□□□□ 0.42
Cpsf4Q8BQZ5 5033430I15Rik-201ENSMUST00000038032 729 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Cpsf4Q8BQZ5 Nr1d2-201ENSMUST00000090543 4663 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Cpsf4Q8BQZ5 Igsf8-202ENSMUST00000085912 2182 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
Cpsf4Q8BQZ5 Dhx15-201ENSMUST00000031061 3010 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Cpsf4Q8BQZ5 Foxj1-201ENSMUST00000036215 2623 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Cpsf4Q8BQZ5 Chst7-201ENSMUST00000044138 2206 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Cpsf4Q8BQZ5 Pigw-201ENSMUST00000067058 2675 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Cpsf4Q8BQZ5 Gm26689-201ENSMUST00000180927 1818 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Cpsf4Q8BQZ5 Gm26553-201ENSMUST00000181531 1818 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Cpsf4Q8BQZ5 Ppm1n-201ENSMUST00000032560 1648 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Cpsf4Q8BQZ5 Psmd3-201ENSMUST00000017365 2148 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Cpsf4Q8BQZ5 AU019823-202ENSMUST00000145139 2805 ntTSL 2 BASIC17.65■□□□□ 0.42
Retrieved 100 of 76,532 protein–RNA pairs in 34.5 ms